BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958645|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_I20, 5'
         (687 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q17VU7|HTPG_HELAH Chaperone protein htpG OS=Helicobacter acin...    32   3.2  

>sp|Q17VU7|HTPG_HELAH Chaperone protein htpG OS=Helicobacter
           acinonychis (strain Sheeba) GN=htpG PE=3 SV=1
          Length = 621

 Score = 32.0 bits (71), Expect = 3.2
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = -2

Query: 350 YSANEAVKHSFQTKLSMTLMQE-ANLAYKHPNEAPTSALSAHLPTSYPHTIWIVNLSAET 174
           +  NE +K    T++++ L  E AN A +   ++     S H+P     T     +  E 
Sbjct: 159 FEINECIKDEQGTEITLFLKDEDANFASRWEIDSIVKKYSEHIPFPIFLTYTDTKMEGEG 218

Query: 173 HTSIEVKIKRCLRVLEAWILW 111
               EVK ++C ++ +A  LW
Sbjct: 219 DHKKEVKEEKCEQINQASALW 239

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958645|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_I20, 5'
         (687 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6R0R5|B6R0R5_9RHOB Putative uncharacterized protein OS=Pseud...    35   3.4  
tr|A3LT02|A3LT02_PICST RLR1 (THO2) (Fragment) OS=Pichia stipitis...    35   4.5  
tr|Q0SI18|Q0SI18_RHOSR DNA-directed DNA polymerase I OS=Rhodococ...    34   10.0 

>tr|B6R0R5|B6R0R5_9RHOB Putative uncharacterized protein
           OS=Pseudovibrio sp. JE062 GN=PJE062_4911 PE=4 SV=1
          Length = 92

 Score = 35.4 bits (80), Expect = 3.4
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = -1

Query: 540 TTIGNSPVNHFHPAKNSQSPPHYDIGDHKTVAHLSKLHT 424
           T  G  P  H HP KN     H D G H+T  H  K HT
Sbjct: 45  TQHGGDPEGHKHPHKNRAGKGHSDNGHHRTKMHDHKEHT 83


>tr|A3LT02|A3LT02_PICST RLR1 (THO2) (Fragment) OS=Pichia stipitis
            GN=RLR1 PE=4 SV=2
          Length = 1574

 Score = 35.0 bits (79), Expect = 4.5
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
 Frame = -2

Query: 365  TLANFYSANEAVKHSFQTKLSMTLMQEANLAYKHPNEAP-------TSALSA-HLPTSYP 210
            TL NF+ + E ++ SF +   +T      L +      P       T  LSA  + T + 
Sbjct: 840  TLVNFFGSKEDLEKSFMSIAELTDTYNVPLQWSFELWRPLLAANESTEVLSAGFVSTFWQ 899

Query: 209  HTIWIVNLSAETHTSIEVKIKRCLRVLEAWI 117
              ++ +N SA+ +T+  VKI+  +R L+ WI
Sbjct: 900  LALYDLNYSADLYTNETVKIESNIRSLKEWI 930


>tr|Q0SI18|Q0SI18_RHOSR DNA-directed DNA polymerase I OS=Rhodococcus
           sp. (strain RHA1) GN=polA PE=3 SV=1
          Length = 914

 Score = 33.9 bits (76), Expect = 10.0
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +1

Query: 82  KAFHMVIKQHHKIHASRTLKQRFIFTSMLV*VSADKLTIHIVCGYEVGRCADRAE 246
           +AF+ +  ++ K H+ +     + FTSML+ +  D+   H+   ++V R   RAE
Sbjct: 38  RAFYALPAENFKTHSGQVTNAVYGFTSMLINLLRDEQPSHVAAAFDVSRQTFRAE 92