DK958647
Clone id TST39A01NGRL0002_I22
Library
Length 669
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_I22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CCACCATCACCTTGGTGTGAGCTCTCTGATTTGAAGAAGCTCGCAACTTCCGCTCCCCCT
TTACTCTCTCAGGTACAGATTTTTCAACGGTTTCTGCCTTGTGTGTTGAGAGATCCCATG
AGGTGGGAGCTTCCATATTACAGAAGTGCAACAGGCTCCTTTTAAGAATGATAGTCTTTT
GTCCACACAAAAAATACAGATTTTGGGATCTACGCTAACGAGAAACAGATGGTTGGTACT
GCTTGCTTCCAGTTACGGTTCCGAGATACAAGTCAGTGTTTGACAACGGTATTCCTTTCA
AAGTCTCATTACAGCAGTCCCCATCCTTATTTTATTCAGGTCATTGGCAAGCCCCATGTG
GCGTCCCCCGTCTTGTGTCAGAGCCGGAGCCGGAGCTTCCAAGCATCTATCAATGCAGAA
GTATGTGATAATGTGCATCTCTCGGGCTCTTGCAAGCGATCAGTTTGCCACACTAGCTCA
TGCATGGAGAGGGGACTCGAGTTAAGGTGTGCGACAATTTGGCATGGACTACTACCATCA
CGTCATCCATTGGTTTCACAACAAAGCACTCCATACAAGAGCAGCTTCTCTACTCATTGC
TCAACAGCTTCATCTTTCAGATTTTCCTGCAGTTCCAGCCAAAATCAAGGTTTGGCCTGA
CCCTGCTGT
■■Homology search results ■■ -
sp_hit_id Q9VCR6
Definition sp|Q9VCR6|SAV_DROME Scaffold protein salvador OS=Drosophila melanogaster
Align length 74
Score (bit) 34.3
E-value 0.59
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958647|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_I22, 5'
(654 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9VCR6|SAV_DROME Scaffold protein salvador OS=Drosophila mela... 34 0.59
sp|Q9HDS6|MTAL3_KLULA Mating-type protein ALPHA3 OS=Kluyveromyce... 31 6.5
sp|A2A5X5|KR10D_MOUSE Putative keratin-associated protein 10-lik... 31 6.5

>sp|Q9VCR6|SAV_DROME Scaffold protein salvador OS=Drosophila
melanogaster GN=sav PE=1 SV=2
Length = 608

Score = 34.3 bits (77), Expect = 0.59
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +2

Query: 338 RSLASPMWRPPSCVRAGAGASKHLSMQKYVIMCISRALASDQFATLAHAWRGDSS*GVRQ 517
+SL P PPS V AGAG S + S+QK + ++L + L W + R+
Sbjct: 384 QSLYVPPRTPPSAV-AGAGGSANGSLQK---VPSQQSLTEPEELPLPPGWATQYTLHGRK 439

Query: 518 FGMDYYHHVIHWFH 559
+ +D+ H HW H
Sbjct: 440 YYIDHNAHTTHWNH 453


>sp|Q9HDS6|MTAL3_KLULA Mating-type protein ALPHA3 OS=Kluyveromyces
lactis GN=HMLALPHA3 PE=2 SV=1
Length = 897

Score = 30.8 bits (68), Expect = 6.5
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Frame = +1

Query: 217 NEKQMVGT-------ACFQLRFRDTSQCLTTVFLSKSHYSSPHPYFIQVIGKPHVASPVL 375
NE Q GT C + +S C+ V L K + H Y +Q GK + P++
Sbjct: 688 NECQQYGTNMTTWICGCNDAKVSPSSTCIHLVSLYKQKFPFYHGYTLQRFGKRNNGVPLV 747

Query: 376 CQSRSRSFQASINAEVCDNV--HLSGSCKRSVCHTSSCM 486
+ S Q+ E +N+ +S VC+T+ M
Sbjct: 748 ---QHESLQSDTKIESTENMSFEISDVTINGVCNTTKQM 783


>sp|A2A5X5|KR10D_MOUSE Putative keratin-associated protein 10-like
ENSP00000375147 homolog OS=Mus musculus PE=3 SV=1
Length = 502

Score = 30.8 bits (68), Expect = 6.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1

Query: 340 VIGKPHVASPVLCQ----SRSRSFQASINAEVCDNVHLSGSCKRSVCHTSSC 483
VI KP PV+C+ S + AS +C+ V +C + VC T SC
Sbjct: 171 VICKPCCCQPVICEPSCCSAVCAVPASCQPMICEPVVCEPACCQPVCPTPSC 222


tr_hit_id B8LMJ1
Definition tr|B8LMJ1|B8LMJ1_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 131
Score (bit) 49.3
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958647|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_I22, 5'
(654 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LMJ1|B8LMJ1_PICSI Putative uncharacterized protein OS=Picea... 49 2e-04
tr|A9S6N5|A9S6N5_PHYPA Predicted protein (Fragment) OS=Physcomit... 36 2.4
tr|B6N2W2|B6N2W2_BRAFL Putative uncharacterized protein OS=Branc... 35 5.3
tr|Q6L3J2|Q6L3J2_SOLDE Major Facilitator Superfamily protein OS=... 34 6.8
tr|Q6L3J1|Q6L3J1_SOLDE POT family protein OS=Solanum demissum GN... 34 8.9

>tr|B8LMJ1|B8LMJ1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 411

Score = 49.3 bits (116), Expect = 2e-04
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Frame = +1

Query: 211 YANEKQMVGTACFQLRFRDTSQCLTTVFLSKSHYSSPHPYFIQVIGKPHVASP------- 369
+ E M+G ACF+ R S +TV ++ S S + Y +Q I + H +SP
Sbjct: 17 FIRENHMLGYACFRFPLRCKSSISSTVSVTHSPCSYSY-YSLQNIHR-HSSSPSSSSLSS 74

Query: 370 -VLCQSRSRSFQASINAEVCDNVHLSGSCKRSVCHTSSCM--ERGLELRCATIWHGLLPS 540
VL Q R+ +FQ + + E C HLS + KR+ H+SSC+ E + ATIWH L+PS
Sbjct: 75 FVLFQ-RNNNFQHN-SIETC--CHLSNA-KRAQHHSSSCLLAENHIGSVGATIWHALIPS 129

Query: 541 RHPLVSQQSTP 573
Q P
Sbjct: 130 SSQFSHTQQVP 140


>tr|A9S6N5|A9S6N5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_163134 PE=4 SV=1
Length = 181

Score = 35.8 bits (81), Expect = 2.4
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 15/108 (13%)
Frame = +1

Query: 289 VFLSKSHYSSPHPYFIQVIGKPHVASPVLCQSRSRSFQAS-------------INAEVCD 429
V L H SSP + +++ + + S SR+F+ S N E C
Sbjct: 50 VALPPLHPSSPRAHSFKLVTRAPATA-----SLSRAFRRSGKGSNSRQDVSLLTNQETCG 104

Query: 430 NVHLSGSCKRSVCHTSSCMERGLELRCATIWHGLLPSRH--PLVSQQS 567
++ S H SSC+ ATIWH LLP+RH PL S S
Sbjct: 105 HMSPCTSMTSFHNHASSCILAADGKVGATIWHALLPARHLAPLESDFS 152


>tr|B6N2W2|B6N2W2_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_89974 PE=4 SV=1
Length = 1425

Score = 34.7 bits (78), Expect = 5.3
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = -1

Query: 405 CLEAPAPALTQDGGRHMGLANDLNKIRMGTAVMRL*KEYRCQTLTCISEP*LEASSTNHL 226
C++ PAPAL + H G D + GT + E R + C P +E + H
Sbjct: 662 CVDNPAPALDANCTCHAGYIGD--GLASGTGCL----EIRPCSFACCPRPRIELTLPEHQ 715

Query: 225 FLVSVDPKICIFCVDKRLS 169
V VD ++ IF D L+
Sbjct: 716 NYVEVDFRVYIFAFDNTLN 734


>tr|Q6L3J2|Q6L3J2_SOLDE Major Facilitator Superfamily protein
OS=Solanum demissum GN=SDM1_28t00021 PE=4 SV=2
Length = 531

Score = 34.3 bits (77), Expect = 6.8
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +2

Query: 239 LLASSYGSEIQVSV*QRYSFQSLITAVPILILFRSLASPMWRPPSCVRAGAGASKHLSMQ 418
+LA SY V F SLI+A+ IL+L + A + RPP C G+ S
Sbjct: 50 ILADSYLGSFSV-----IWFSSLISALGILLLLLTSAIDVLRPPPC-DDGSSLCTSPSTH 103

Query: 419 KYVIMCISRALAS 457
+Y ++ ++ ALAS
Sbjct: 104 QYAVLYVALALAS 116


>tr|Q6L3J1|Q6L3J1_SOLDE POT family protein OS=Solanum demissum
GN=SDM1_28t00020 PE=4 SV=2
Length = 531

Score = 33.9 bits (76), Expect = 8.9
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +2

Query: 239 LLASSYGSEIQVSV*QRYSFQSLITAVPILILFRSLASPMWRPPSCVRAGAGASKHLSMQ 418
+LA SY V F SLI+A+ IL+L + A + RPP C G+ S
Sbjct: 50 ILADSYLGSFSV-----IWFSSLISALGILLLLFTSAIDVLRPPPC-DDGSSLCTSPSTH 103

Query: 419 KYVIMCISRALAS 457
+Y ++ ++ ALAS
Sbjct: 104 QYAVLYVALALAS 116