DK958677 |
Clone id |
TST39A01NGRL0002_K05 |
Library |
TST39 |
Length |
612 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_K05. 5' end sequence. |
Accession |
DK958677 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL868Contig1 |
Sequence |
GATCTCACGATTGCTTCGCACCACGTCGTGCAGCACTTCGCAGTGAAAGTGGACTTTGAA TCCTGTTGAAGCCATTGTGCCTTCTTGTCAAGCCCTCAAAACCTAGGTGATTGACTCAGA GGCGTGACGATGAGCACCGAGATGAAAGGGGACGAGCTGCAGAATGGTCTCAAGCCTAAA CCAAAGAAGGAGAGCGCGAAGAAGGTTCCAAAGGAGAAGAAGGAAGTTGCACCCACCGGA AAAGAGGTCAAGAAAGAGACAAAGCTCGGTATGACCATAAAGAAGAATGACAATTTTGGA GACTGGTATTCAGAGGTGGTTGTGAAGAGTGGAATGATCGAATACTACGATGTTTCAGGA TGCTATATCTTGCGTCCATGGTCATATGCAATATGGGAAATATTGAAGGATTTTTTTGAT GCAGAAATAAAGAAAATTGGGATTCAGAATTCTTATTTTCCTCTTTTTGTGTCTGAACAA GCCTTGACAAAAGAAAAGGATCATATTGAGGGCTTTGCTCCTGAGGTTGCATGGGTAACC AAATCTGGAAATACGGATTTAGAGGTTCCTATTGCTATCCGTCCAACCAGTGAAACTGTG ATGTATCCTGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8CGC7 |
Definition |
sp|Q8CGC7|SYEP_MOUSE Bifunctional aminoacyl-tRNA synthetase OS=Mus musculus |
Align length |
124 |
Score (bit) |
199.0 |
E-value |
9.0e-51 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RFZ3 |
Definition |
tr|A9RFZ3|A9RFZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
124 |
Score (bit) |
217.0 |
E-value |
5.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958677|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_K05, 5' (612 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RFZ3|A9RFZ3_PHYPA Predicted protein OS=Physcomitrella paten... 217 5e-55 tr|Q2QS12|Q2QS12_ORYSJ Bifunctional aminoacyl-tRNA synthetase, p... 211 2e-53 tr|Q2QS11|Q2QS11_ORYSJ cDNA clone:001-044-H01, full insert seque... 211 2e-53 tr|Q0INI9|Q0INI9_ORYSJ Os12g0443700 protein (Fragment) OS=Oryza ... 211 2e-53 tr|B8BPH6|B8BPH6_ORYSI Putative uncharacterized protein OS=Oryza... 211 2e-53 tr|B7SDH3|B7SDH3_ORYSJ Aminoacyl-tRNA synthase OS=Oryza sativa s... 211 2e-53 tr|A3CH13|A3CH13_ORYSJ Putative uncharacterized protein OS=Oryza... 211 2e-53 tr|A9PFZ9|A9PFZ9_POPTR Putative uncharacterized protein OS=Popul... 206 7e-52 tr|A7Q0Z4|A7Q0Z4_VITVI Chromosome chr7 scaffold_42, whole genome... 203 7e-51 tr|Q9M1R2|Q9M1R2_ARATH Multifunctional aminoacyl-tRNA ligase-lik... 202 1e-50 tr|Q6TXE9|Q6TXE9_RAT LRRGT00050 OS=Rattus norvegicus GN=Eprs PE=... 196 7e-49 tr|Q76KD2|Q76KD2_ORYLA Glutamyl-prolyl-tRNA synthetase (Fragment... 194 3e-48 tr|Q5ZJ86|Q5ZJ86_CHICK Putative uncharacterized protein OS=Gallu... 193 6e-48 tr|Q5I0H2|Q5I0H2_RAT Eprs protein (Fragment) OS=Rattus norvegicu... 193 6e-48 tr|B1WBE0|B1WBE0_XENLA LOC100158438 protein OS=Xenopus laevis GN... 191 2e-47 tr|B3RQG2|B3RQG2_TRIAD Putative uncharacterized protein OS=Trich... 191 3e-47 tr|A8PJX1|A8PJX1_BRUMA Bifunctional aminoacyl-tRNA synthetase, p... 191 3e-47 tr|B6PUY6|B6PUY6_BRAFL Putative uncharacterized protein OS=Branc... 191 4e-47 tr|B6L487|B6L487_BRAFL Putative uncharacterized protein OS=Branc... 191 4e-47 tr|B1H1R9|B1H1R9_XENLA LOC100158287 protein OS=Xenopus laevis GN... 190 5e-47 tr|B0BMK2|B0BMK2_XENTR LOC100145057 protein (Fragment) OS=Xenopu... 190 5e-47 tr|Q016X8|Q016X8_OSTTA Multifunctional aminoacyl-tRNA ligase-lik... 190 6e-47 tr|A4RYY0|A4RYY0_OSTLU Predicted protein OS=Ostreococcus lucimar... 190 6e-47 tr|B7PKR5|B7PKR5_IXOSC Glutamyl-tRNA synthetase, cytoplasmic, pu... 186 7e-46 tr|B6K068|B6K068_SCHJP Cytoplasmic proline-tRNA ligase Prs1 OS=S... 184 3e-45 tr|B6SW27|B6SW27_MAIZE Bifunctional aminoacyl-tRNA synthetase OS... 184 4e-45 tr|Q4DLK5|Q4DLK5_TRYCR Prolyl-tRNA synthetase, putative OS=Trypa... 184 4e-45 tr|Q4S8E3|Q4S8E3_TETNG Chromosome undetermined SCAF14706, whole ... 183 6e-45 tr|B8LCI1|B8LCI1_THAPS Prolyl-trna synthetase (Fragment) OS=Thal... 183 6e-45 tr|Q4DZZ4|Q4DZZ4_TRYCR Prolyl-tRNA synthetase, putative OS=Trypa... 183 6e-45
>tr|A9RFZ3|A9RFZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113773 PE=3 SV=1 Length = 544
Score = 217 bits (552), Expect = 5e-55 Identities = 97/124 (78%), Positives = 116/124 (93%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 KEVKKE+ LG+ KK++NFG+WYS+VVV+ MIEYYDVSGCYILRPWSY+IWE +KDFFD Sbjct: 54 KEVKKESGLGLAFKKDENFGEWYSDVVVRGEMIEYYDVSGCYILRPWSYSIWESIKDFFD 113
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 EIKK+GI+N+YFPLFVSE+ALTKEKDH+EGFAPEVAWVT+SG+++LE PIAIRPTSETV Sbjct: 114 KEIKKMGIENTYFPLFVSEKALTKEKDHVEGFAPEVAWVTRSGDSELEEPIAIRPTSETV 173
Query: 601 MYPV 612 MYP+ Sbjct: 174 MYPI 177
>tr|Q2QS12|Q2QS12_ORYSJ Bifunctional aminoacyl-tRNA synthetase, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g25710 PE=3 SV=1 Length = 489
Score = 211 bits (538), Expect = 2e-53 Identities = 98/123 (79%), Positives = 109/123 (88%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 601 MYP 609 MYP Sbjct: 139 MYP 141
>tr|Q2QS11|Q2QS11_ORYSJ cDNA clone:001-044-H01, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os12g25710 PE=2 SV=1 Length = 510
Score = 211 bits (538), Expect = 2e-53 Identities = 98/123 (79%), Positives = 109/123 (88%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 601 MYP 609 MYP Sbjct: 139 MYP 141
>tr|Q0INI9|Q0INI9_ORYSJ Os12g0443700 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os12g0443700 PE=3 SV=1 Length = 515
Score = 211 bits (538), Expect = 2e-53 Identities = 98/123 (79%), Positives = 109/123 (88%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 24 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 83
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 84 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 143
Query: 601 MYP 609 MYP Sbjct: 144 MYP 146
>tr|B8BPH6|B8BPH6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38226 PE=4 SV=1 Length = 510
Score = 211 bits (538), Expect = 2e-53 Identities = 98/123 (79%), Positives = 109/123 (88%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 601 MYP 609 MYP Sbjct: 139 MYP 141
>tr|B7SDH3|B7SDH3_ORYSJ Aminoacyl-tRNA synthase OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 510
Score = 211 bits (538), Expect = 2e-53 Identities = 98/123 (79%), Positives = 109/123 (88%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 601 MYP 609 MYP Sbjct: 139 MYP 141
>tr|A3CH13|A3CH13_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034585 PE=3 SV=1 Length = 533
Score = 211 bits (538), Expect = 2e-53 Identities = 98/123 (79%), Positives = 109/123 (88%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 601 MYP 609 MYP Sbjct: 139 MYP 141
>tr|A9PFZ9|A9PFZ9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 498
Score = 206 bits (525), Expect = 7e-52 Identities = 95/123 (77%), Positives = 108/123 (87%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 KEVKKET LG++ KK +NFG+WYSEVVV MIEYYD+SGCYILRPW+ +IWEI++ FFD Sbjct: 7 KEVKKETGLGLSFKKEENFGEWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEIMQVFFD 66
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 AEIKK+ I+N YFPLFVS L KEKDHIEGFAPEVAWVTKSG +DLE+PIAIRPTSETV Sbjct: 67 AEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPEVAWVTKSGKSDLEIPIAIRPTSETV 126
Query: 601 MYP 609 MYP Sbjct: 127 MYP 129
>tr|A7Q0Z4|A7Q0Z4_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028238001 PE=3 SV=1 Length = 516
Score = 203 bits (516), Expect = 7e-51 Identities = 94/123 (76%), Positives = 106/123 (86%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 KEVKKET LG++ KK +NFG+WYSEV V MIEYYD+SGCYILRPW+ A+WE ++ FFD Sbjct: 26 KEVKKETGLGLSYKKEENFGEWYSEVCVNGEMIEYYDISGCYILRPWTMAVWETMQTFFD 85
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 AEIKK+ I+N YFPLFVS L KEKDHIEGFAPEVAWVTKSG +DLEVPIAIRPTSETV Sbjct: 86 AEIKKMKIKNCYFPLFVSPGVLQKEKDHIEGFAPEVAWVTKSGQSDLEVPIAIRPTSETV 145
Query: 601 MYP 609 MYP Sbjct: 146 MYP 148
>tr|Q9M1R2|Q9M1R2_ARATH Multifunctional aminoacyl-tRNA ligase-like protein OS=Arabidopsis thaliana GN=T17J13.8 PE=2 SV=1 Length = 530
Score = 202 bits (514), Expect = 1e-50 Identities = 95/123 (77%), Positives = 109/123 (88%) Frame = +1
Query: 241 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEILKDFFD 420 K+VKKET LG+++KK++NFG+WYSEV K MIEYYD+SGCYILRPWS AIWEI++ FFD Sbjct: 40 KDVKKETGLGLSVKKDENFGEWYSEVC-KQDMIEYYDISGCYILRPWSMAIWEIMQIFFD 98
Query: 421 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 600 AEIKK+ ++N YFPLFVS L KEKDHIEGFAPEVAWVTKSG +DLEVPIAIRPTSETV Sbjct: 99 AEIKKMKVKNCYFPLFVSPGVLEKEKDHIEGFAPEVAWVTKSGKSDLEVPIAIRPTSETV 158
Query: 601 MYP 609 MYP Sbjct: 159 MYP 161
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