DK958679
Clone id TST39A01NGRL0002_K07
Library
Length 396
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_K07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGAGCCCTTGGAGAGCTTTTCTGAAGGGGTGTTTTGGATTTTCGGTCTGCAAGCTTCCCT
CAAATGGTGTCATAGACTATCAACAACAATATGAGAAACCTTATTGAGTTGTGCACTCCA
TGGCATTGCCAAGGGTTGTGTAAAGCATATCCGAAGAGAAGAGCAACTGTGGGTGGGTAG
GGCGGTTGGCTTTATTGAGGTTTTTGGAATGTGTGAGCTCATTGGAGGCGGTGTTGCCTT
GGGTGGGATGCTTTGGCTTATAACTTGTGAAGAGTTGGTTTGTACGAGTAAAACATATAT
GCTTGTATGTGTTTTGGCTCTTTTTCGCTATGCAATATGAGTGCTGCCATGCTGTAAAAA
AAAAATAAAAAAAAAATCTCCGAGGGCTCCCCCCAA
■■Homology search results ■■ -
sp_hit_id Q0EAB5
Definition sp|Q0EAB5|5HT1B_HORSE 5-hydroxytryptamine receptor 1B OS=Equus caballus
Align length 44
Score (bit) 35.0
E-value 0.12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958679|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_K07, 5'
(355 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0EAB5|5HT1B_HORSE 5-hydroxytryptamine receptor 1B OS=Equus c... 35 0.12
sp|Q5UP09|YR753_MIMIV Putative F-box/LRR-repeat protein R753 OS=... 33 0.45
sp|O46598|TIMD1_CERAE Hepatitis A virus cellular receptor 1 OS=C... 31 2.2
sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Hom... 30 2.9
sp|A7EQA8|INO80_SCLS1 Putative DNA helicase INO80 OS=Sclerotinia... 30 2.9
sp|Q99700|ATX2_HUMAN Ataxin-2 OS=Homo sapiens GN=ATXN2 PE=1 SV=2 30 2.9
sp|Q6S6T9|VGLB_EHV1V Glycoprotein B OS=Equine herpesvirus 1 (str... 30 3.8
sp|P25218|VGLB_EHV1D Glycoprotein B OS=Equine herpesvirus 1 (str... 30 3.8
sp|Q6DLH8|VGLB_EHV1B Glycoprotein B OS=Equine herpesvirus 1 (str... 30 3.8
sp|P18551|VGLB_EHV1A Glycoprotein B OS=Equine herpesvirus 1 (str... 30 3.8
sp|P18050|VGLB_EHV1 Glycoprotein B OS=Equine herpesvirus 1 (stra... 30 3.8
sp|Q5D891|PK3C3_PIG Phosphatidylinositol 3-kinase catalytic subu... 30 3.8
sp|Q07008|NOTC1_RAT Neurogenic locus notch homolog protein 1 OS=... 30 3.8
sp|Q8HYX8|MCP_CALJA Membrane cofactor protein OS=Callithrix jacc... 30 3.8
sp|Q99590|SFRIP_HUMAN SFRS2-interacting protein OS=Homo sapiens ... 30 5.0
sp|Q8IZF6|GP112_HUMAN Probable G-protein coupled receptor 112 OS... 30 5.0
sp|Q8WXX7|AUTS2_HUMAN Autism susceptibility gene 2 protein OS=Ho... 30 5.0
sp|Q80YF9|TCGAP_MOUSE TC10/CDC42 GTPase-activating protein OS=Mu... 29 6.5
sp|A4QRM8|SDS23_MAGGR Protein SDS23 OS=Magnaporthe grisea GN=SDS... 29 6.5
sp|O88763|PK3C3_RAT Phosphatidylinositol 3-kinase catalytic subu... 29 6.5
sp|Q6PF93|PK3C3_MOUSE Phosphatidylinositol 3-kinase catalytic su... 29 6.5
sp|P38681|NIR_NEUCR Nitrite reductase [NAD(P)H] OS=Neurospora cr... 29 6.5
sp|O04308|MPPA2_ARATH Probable mitochondrial-processing peptidas... 29 6.5
sp|Q9HCI5|MAGE1_HUMAN Melanoma-associated antigen E1 OS=Homo sap... 29 6.5
sp|Q06885|GP10_DICDI Glycoprotein gp100 OS=Dictyostelium discoid... 29 6.5
sp|Q8R4Z4|ETV3_MOUSE ETS translocation variant 3 OS=Mus musculus... 29 6.5
sp|Q8SQ19|CREB3_BOVIN Cyclic AMP-responsive element-binding prot... 29 6.5
sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus mus... 29 6.5
sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sa... 29 6.5
sp|Q9C5S0|AGP9_ARATH Classical arabinogalactan protein 9 OS=Arab... 29 6.5

>sp|Q0EAB5|5HT1B_HORSE 5-hydroxytryptamine receptor 1B OS=Equus
caballus GN=HTR1B PE=2 SV=1
Length = 390

Score = 35.0 bits (79), Expect = 0.12
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2

Query: 237 ATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQPLAMPWSAQL 106
A PPP S + + +A P+H+CS+ + +A+PW L
Sbjct: 9 APPPPAGSQTGVSQVNLSAAPSHNCSTEGYVYQDSVALPWKVLL 52


>sp|Q5UP09|YR753_MIMIV Putative F-box/LRR-repeat protein R753
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R753 PE=4
SV=1
Length = 751

Score = 33.1 bits (74), Expect = 0.45
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1

Query: 289 TRTNQLFTSYKPKHPTQGNTASNELTHSKNLNKANRPTHPQLLFSSD 149
TR N F SYKP+H + +T ++ +TH ++K + L FSSD
Sbjct: 176 TRNNHPFLSYKPRHIYEKSTNNHIMTHQTKIDKP-KFNIDDLKFSSD 221


>sp|O46598|TIMD1_CERAE Hepatitis A virus cellular receptor 1
OS=Cercopithecus aethiops GN=HAVCR1 PE=1 SV=2
Length = 478

Score = 30.8 bits (68), Expect = 2.2
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -2

Query: 273 SSQVISQSIPPKATPPPMSSHIPKTSIKPTALP--THSCSSLRICFTQPLAMPWSAQLNK 100
++ ++S +PP TP PM H P + +A P TH + L TQP + P +
Sbjct: 306 TTTMVSTFVPP--TPLPMQDHEPVATSPSSAQPAETHPVTLLGATRTQPTSSPLYSYTTD 363

Query: 99 VSHIVVDS 76
S V +S
Sbjct: 364 GSDTVTES 371


>sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo
sapiens GN=NUP214 PE=1 SV=2
Length = 2090

Score = 30.4 bits (67), Expect = 2.9
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -2

Query: 270 SQVISQSIPPKATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQPLAMPWSA 112
SQ + ++PP A PPP ++ P PT+ PT S SL T P ++P SA
Sbjct: 1443 SQQTNSTVPPSA-PPPTTAATP----LPTSFPTLSFGSLLSSATTP-SLPMSA 1489


>sp|A7EQA8|INO80_SCLS1 Putative DNA helicase INO80 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=INO80
PE=3 SV=1
Length = 1707

Score = 30.4 bits (67), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -2

Query: 321 RAKTHTSIYVLL----VQTNSSQVISQSIPPKATPPPMSSHIPKTSIKPTAL 178
R ++ T I +L T + +Q PP A PP + SHIP S P+ L
Sbjct: 16 RQQSQTEIRSILNPSTTSTGAHPSFNQYHPPTAAPPLIPSHIPLQSTTPSTL 67


>sp|Q99700|ATX2_HUMAN Ataxin-2 OS=Homo sapiens GN=ATXN2 PE=1 SV=2
Length = 1313

Score = 30.4 bits (67), Expect = 2.9
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = -2

Query: 249 IPPKATPPPMSSHIPKTSIKPTALPTH--SCSSLRICFTQPLAMPWSAQLNKVSHIVVDS 76
+ P T PP +H+P+ ++ +P+H + + + + TQP P +A + S
Sbjct: 1233 VQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVS 1292

Query: 75 L*HHLREACRPKIQNTPSEKL 13
H P +Q ++L
Sbjct: 1293 TTAHFPYMTHPSVQAHHQQQL 1313


>sp|Q6S6T9|VGLB_EHV1V Glycoprotein B OS=Equine herpesvirus 1 (strain
V592) GN=GB PE=3 SV=1
Length = 980

Score = 30.0 bits (66), Expect = 3.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2

Query: 246 PPKATPPPMSSHIPKTSIKPTALPTHSCSSLRI 148
PP +TP MS+H T + PT LPT + LR+
Sbjct: 92 PPTSTPTSMSTHSHGT-VDPTLLPTETPDPLRL 123


>sp|P25218|VGLB_EHV1D Glycoprotein B OS=Equine herpesvirus 1 (strain
Kentucky D) GN=GB PE=3 SV=2
Length = 980

Score = 30.0 bits (66), Expect = 3.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2

Query: 246 PPKATPPPMSSHIPKTSIKPTALPTHSCSSLRI 148
PP +TP MS+H T + PT LPT + LR+
Sbjct: 92 PPTSTPTSMSTHSHGT-VDPTLLPTETPDPLRL 123


>sp|Q6DLH8|VGLB_EHV1B Glycoprotein B OS=Equine herpesvirus 1 (strain
Ab4p) GN=GB PE=3 SV=1
Length = 980

Score = 30.0 bits (66), Expect = 3.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2

Query: 246 PPKATPPPMSSHIPKTSIKPTALPTHSCSSLRI 148
PP +TP MS+H T + PT LPT + LR+
Sbjct: 92 PPTSTPTSMSTHSHGT-VDPTLLPTETPDPLRL 123


>sp|P18551|VGLB_EHV1A Glycoprotein B OS=Equine herpesvirus 1 (strain
AB1) GN=GB PE=3 SV=1
Length = 980

Score = 30.0 bits (66), Expect = 3.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2

Query: 246 PPKATPPPMSSHIPKTSIKPTALPTHSCSSLRI 148
PP +TP MS+H T + PT LPT + LR+
Sbjct: 92 PPTSTPTSMSTHSHGT-VDPTLLPTETPDPLRL 123


tr_hit_id Q0EAB0
Definition tr|Q0EAB0|Q0EAB0_HORSE 5-hydroxytryptamine receptor 1B (Fragment) OS=Equus caballus
Align length 44
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958679|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_K07, 5'
(355 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0EAB0|Q0EAB0_HORSE 5-hydroxytryptamine receptor 1B (Fragment... 35 1.9
tr|A9UP16|A9UP16_MONBE Predicted protein OS=Monosiga brevicollis... 35 1.9
tr|B6H2I2|B6H2I2_PENCH Pc13g14600 protein OS=Penicillium chrysog... 35 1.9
tr|B2VZU2|B2VZU2_PYRTR Putative uncharacterized protein OS=Pyren... 35 1.9
tr|A4WKL9|A4WKL9_PYRAR Putative uncharacterized protein OS=Pyrob... 35 1.9
tr|Q4RC32|Q4RC32_TETNG Chromosome undetermined SCAF20007, whole ... 34 3.2
tr|B6KJL5|B6KJL5_TOXGO Putative uncharacterized protein OS=Toxop... 34 3.2
tr|A6RAV2|A6RAV2_AJECN Predicted protein OS=Ajellomyces capsulat... 34 3.2
tr|A2YC51|A2YC51_ORYSI Putative uncharacterized protein OS=Oryza... 33 5.5
tr|Q16FP7|Q16FP7_AEDAE Cramped protein OS=Aedes aegypti GN=AAEL0... 33 5.5
tr|A8P1J4|A8P1J4_BRUMA Putative uncharacterized protein OS=Brugi... 33 5.5
tr|A2F323|A2F323_TRIVA Putative uncharacterized protein OS=Trich... 33 5.5
tr|A8NZU3|A8NZU3_COPC7 Predicted protein OS=Coprinopsis cinerea ... 33 5.5
tr|Q54K04|Q54K04_DICDI Putative uncharacterized protein OS=Dicty... 33 7.2
tr|A4XC59|A4XC59_SALTO NLP/P60 protein OS=Salinispora tropica (s... 33 9.4
tr|B8GAB4|B8GAB4_9CHLR Peptidylprolyl isomerase OS=Chloroflexus ... 33 9.4
tr|A3SMC7|A3SMC7_9RHOB Glycine betaine transporter OS=Roseovariu... 33 9.4
tr|B8C3A9|B8C3A9_THAPS Predicted protein OS=Thalassiosira pseudo... 33 9.4
tr|B8C329|B8C329_THAPS Predicted protein OS=Thalassiosira pseudo... 33 9.4
tr|Q6BEU1|Q6BEU1_CAEEL Protein R09E10.9, partially confirmed by ... 33 9.4
tr|Q3S1K9|Q3S1K9_TRYBB Putative uncharacterized protein Tb09.211... 33 9.4
tr|Q38DR9|Q38DR9_9TRYP Putative uncharacterized protein OS=Trypa... 33 9.4
tr|Q7S6F8|Q7S6F8_NEUCR Predicted protein OS=Neurospora crassa GN... 33 9.4
tr|A8NPU0|A8NPU0_COPC7 Predicted protein OS=Coprinopsis cinerea ... 33 9.4

>tr|Q0EAB0|Q0EAB0_HORSE 5-hydroxytryptamine receptor 1B (Fragment)
OS=Equus caballus GN=HTR1B PE=2 SV=1
Length = 300

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2

Query: 237 ATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQPLAMPWSAQL 106
A PPP S + + +A P+H+CS+ + +A+PW L
Sbjct: 9 APPPPAGSQTGVSQVNLSAAPSHNCSTEGYVYQDSVALPWKVLL 52


>tr|A9UP16|A9UP16_MONBE Predicted protein OS=Monosiga brevicollis
GN=4822 PE=4 SV=1
Length = 510

Score = 35.0 bits (79), Expect = 1.9
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2

Query: 246 PPKATPPPMSSHI-PKTSIKPTALPTHSCSSLRI---CFTQPLAMPWSAQLNKVSHIVVD 79
PPK P + + P T+I T LPT+S S++R T+PL P + H VD
Sbjct: 87 PPKRHKPYNFADLGPSTTIVSTTLPTNSNSNMRARTSASTRPLPKPMPCPTSHTQHNGVD 146

Query: 78 SL*HHLREACRPKIQNTPSEKLSKG 4
L + +P + + E+ G
Sbjct: 147 ELLDLMERHHQPSLNTSAMEREDSG 171


>tr|B6H2I2|B6H2I2_PENCH Pc13g14600 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc13g14600 PE=3 SV=1
Length = 793

Score = 35.0 bits (79), Expect = 1.9
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -2

Query: 285 VQTNSSQVISQSIPPKATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQP--LAMPWSA 112
V T SS + S P + P P SS +P TS+ P ++PT S SS+ + P ++P+S
Sbjct: 209 VPTPSSSSVPFSSVPVSVPTPGSSSVPYTSV-PVSVPTPSSSSIPVSVPTPSSSSVPFSV 267

Query: 111 QLNKVSHIVV 82
S I V
Sbjct: 268 PTPSSSTISV 277


>tr|B2VZU2|B2VZU2_PYRTR Putative uncharacterized protein
OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
GN=PTRG_02932 PE=4 SV=1
Length = 748

Score = 35.0 bits (79), Expect = 1.9
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2

Query: 282 QTNSSQVISQ-SIPPKATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQPLAMP 121
QTN + S +PP+ PPP S +P S + PT S + I P+ P
Sbjct: 581 QTNVNPRASNLQLPPQQPPPPQSPRLPSYSAQAGGYPTSSTQPMNIASASPMYFP 635


>tr|A4WKL9|A4WKL9_PYRAR Putative uncharacterized protein
OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM
11321) GN=Pars_1374 PE=4 SV=1
Length = 169

Score = 35.0 bits (79), Expect = 1.9
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = -2

Query: 306 TSIYVLLVQTNSSQVISQSIPPKATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQPLA 127
TS+Y+ L + S++ + ++ P +PPP ++ P TS+ TA P S ++ TQP A
Sbjct: 17 TSLYLYLTRRRESRLFTLTVTPSPSPPPSTTPTP-TSLPTTATPPPSTAT----STQPHA 71

Query: 126 MPWSAQLNKVSHIVVDSL 73
P + L + IVV ++
Sbjct: 72 -PGTEFLIAAALIVVAAI 88


>tr|Q4RC32|Q4RC32_TETNG Chromosome undetermined SCAF20007, whole
genome shotgun sequence. (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00037156001 PE=4 SV=1
Length = 89

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = -2

Query: 279 TNSSQVISQSIPPKATPPPMSSHIPKTSIK------PTALPTHSCS 160
T + + S S P + PPP+SS TS PT+LPT SCS
Sbjct: 2 TTARKAASSSSPSASPPPPLSSPSTVTSTSCSTSGVPTSLPTESCS 47


>tr|B6KJL5|B6KJL5_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_031470 PE=4 SV=1
Length = 550

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Frame = -1

Query: 256 PKHPTQGNTASNELTHSKNLNKANRPTHP-----------QLLFSSDMLYTTLGNAMECT 110
P H +G++ SN + + + + RP HP ++ D YTTLGN++ CT
Sbjct: 68 PPHLNEGHS-SNMMAKVREMRRPARPFHPPSPPVAKSLGGKMKSQYDKFYTTLGNSVPCT 126

Query: 109 T 107
T
Sbjct: 127 T 127


>tr|A6RAV2|A6RAV2_AJECN Predicted protein OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=HCAG_06090 PE=4 SV=1
Length = 652

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2

Query: 258 SQSIPPKATPPPMSSHIPKTSI--KPTALPTHSCSSLRIC 145
+Q + P A+PPP SS + TS+ KP A PT S L C
Sbjct: 227 NQGLVPSASPPPQSSTLSSTSLSTKPLAPPTPSLIELPTC 266


>tr|A2YC51|A2YC51_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_22683 PE=4 SV=1
Length = 491

Score = 33.5 bits (75), Expect = 5.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -2

Query: 327 RKRAKTHTSIYVLLVQTNSSQVISQSIPPKATPPPMSSHIPKTSIKPTALP 175
R RA+ T ++Q +SS + S+ P A+PPP IP S+ P P
Sbjct: 87 RDRARLRT-----ILQRSSSASAASSLAPYASPPPAMPPIPAVSVAPAPAP 132


>tr|Q16FP7|Q16FP7_AEDAE Cramped protein OS=Aedes aegypti
GN=AAEL014683 PE=4 SV=1
Length = 827

Score = 33.5 bits (75), Expect = 5.5
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Frame = -2

Query: 297 YVLLVQTNSSQVISQSIPPKAT------PPPMSSHIPKTSIKPTALPTHSCSSLRICFTQ 136
YV L N+ + + I K+ PP + S P+ ++ P P SCS+ T
Sbjct: 4 YVTLANVNNLIITNHKIDSKSLNVDPKPPPSVDSDDPEDNLSPAQPPAPSCST----ETV 59

Query: 135 PLAMPWSAQLNKVSHIVVDSL*HHLREACRPKIQNTPSEKL 13
P+A +A + + L H L + P +Q P+E+L
Sbjct: 60 PIATSTAAPKSHCNSAAKAPLPHKLID---PSLQQIPTEEL 97