| DK958679 |
| Clone id |
TST39A01NGRL0002_K07 |
| Library |
TST39 |
| Length |
396 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_K07. 5' end sequence. |
| Accession |
DK958679 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL1659Contig1 |
| Sequence |
GGAGCCCTTGGAGAGCTTTTCTGAAGGGGTGTTTTGGATTTTCGGTCTGCAAGCTTCCCT CAAATGGTGTCATAGACTATCAACAACAATATGAGAAACCTTATTGAGTTGTGCACTCCA TGGCATTGCCAAGGGTTGTGTAAAGCATATCCGAAGAGAAGAGCAACTGTGGGTGGGTAG GGCGGTTGGCTTTATTGAGGTTTTTGGAATGTGTGAGCTCATTGGAGGCGGTGTTGCCTT GGGTGGGATGCTTTGGCTTATAACTTGTGAAGAGTTGGTTTGTACGAGTAAAACATATAT GCTTGTATGTGTTTTGGCTCTTTTTCGCTATGCAATATGAGTGCTGCCATGCTGTAAAAA AAAAATAAAAAAAAAATCTCCGAGGGCTCCCCCCAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q0EAB5 |
| Definition |
sp|Q0EAB5|5HT1B_HORSE 5-hydroxytryptamine receptor 1B OS=Equus caballus |
| Align length |
44 |
| Score (bit) |
35.0 |
| E-value |
0.12 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q0EAB0 |
| Definition |
tr|Q0EAB0|Q0EAB0_HORSE 5-hydroxytryptamine receptor 1B (Fragment) OS=Equus caballus |
| Align length |
44 |
| Score (bit) |
35.0 |
| E-value |
1.9 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958679|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_K07, 5' (355 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0EAB0|Q0EAB0_HORSE 5-hydroxytryptamine receptor 1B (Fragment... 35 1.9 tr|A9UP16|A9UP16_MONBE Predicted protein OS=Monosiga brevicollis... 35 1.9 tr|B6H2I2|B6H2I2_PENCH Pc13g14600 protein OS=Penicillium chrysog... 35 1.9 tr|B2VZU2|B2VZU2_PYRTR Putative uncharacterized protein OS=Pyren... 35 1.9 tr|A4WKL9|A4WKL9_PYRAR Putative uncharacterized protein OS=Pyrob... 35 1.9 tr|Q4RC32|Q4RC32_TETNG Chromosome undetermined SCAF20007, whole ... 34 3.2 tr|B6KJL5|B6KJL5_TOXGO Putative uncharacterized protein OS=Toxop... 34 3.2 tr|A6RAV2|A6RAV2_AJECN Predicted protein OS=Ajellomyces capsulat... 34 3.2 tr|A2YC51|A2YC51_ORYSI Putative uncharacterized protein OS=Oryza... 33 5.5 tr|Q16FP7|Q16FP7_AEDAE Cramped protein OS=Aedes aegypti GN=AAEL0... 33 5.5 tr|A8P1J4|A8P1J4_BRUMA Putative uncharacterized protein OS=Brugi... 33 5.5 tr|A2F323|A2F323_TRIVA Putative uncharacterized protein OS=Trich... 33 5.5 tr|A8NZU3|A8NZU3_COPC7 Predicted protein OS=Coprinopsis cinerea ... 33 5.5 tr|Q54K04|Q54K04_DICDI Putative uncharacterized protein OS=Dicty... 33 7.2 tr|A4XC59|A4XC59_SALTO NLP/P60 protein OS=Salinispora tropica (s... 33 9.4 tr|B8GAB4|B8GAB4_9CHLR Peptidylprolyl isomerase OS=Chloroflexus ... 33 9.4 tr|A3SMC7|A3SMC7_9RHOB Glycine betaine transporter OS=Roseovariu... 33 9.4 tr|B8C3A9|B8C3A9_THAPS Predicted protein OS=Thalassiosira pseudo... 33 9.4 tr|B8C329|B8C329_THAPS Predicted protein OS=Thalassiosira pseudo... 33 9.4 tr|Q6BEU1|Q6BEU1_CAEEL Protein R09E10.9, partially confirmed by ... 33 9.4 tr|Q3S1K9|Q3S1K9_TRYBB Putative uncharacterized protein Tb09.211... 33 9.4 tr|Q38DR9|Q38DR9_9TRYP Putative uncharacterized protein OS=Trypa... 33 9.4 tr|Q7S6F8|Q7S6F8_NEUCR Predicted protein OS=Neurospora crassa GN... 33 9.4 tr|A8NPU0|A8NPU0_COPC7 Predicted protein OS=Coprinopsis cinerea ... 33 9.4
>tr|Q0EAB0|Q0EAB0_HORSE 5-hydroxytryptamine receptor 1B (Fragment) OS=Equus caballus GN=HTR1B PE=2 SV=1 Length = 300
Score = 35.0 bits (79), Expect = 1.9 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -2
Query: 237 ATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQPLAMPWSAQL 106 A PPP S + + +A P+H+CS+ + +A+PW L Sbjct: 9 APPPPAGSQTGVSQVNLSAAPSHNCSTEGYVYQDSVALPWKVLL 52
>tr|A9UP16|A9UP16_MONBE Predicted protein OS=Monosiga brevicollis GN=4822 PE=4 SV=1 Length = 510
Score = 35.0 bits (79), Expect = 1.9 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Frame = -2
Query: 246 PPKATPPPMSSHI-PKTSIKPTALPTHSCSSLRI---CFTQPLAMPWSAQLNKVSHIVVD 79 PPK P + + P T+I T LPT+S S++R T+PL P + H VD Sbjct: 87 PPKRHKPYNFADLGPSTTIVSTTLPTNSNSNMRARTSASTRPLPKPMPCPTSHTQHNGVD 146
Query: 78 SL*HHLREACRPKIQNTPSEKLSKG 4 L + +P + + E+ G Sbjct: 147 ELLDLMERHHQPSLNTSAMEREDSG 171
>tr|B6H2I2|B6H2I2_PENCH Pc13g14600 protein OS=Penicillium chrysogenum Wisconsin 54-1255 GN=Pc13g14600 PE=3 SV=1 Length = 793
Score = 35.0 bits (79), Expect = 1.9 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = -2
Query: 285 VQTNSSQVISQSIPPKATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQP--LAMPWSA 112 V T SS + S P + P P SS +P TS+ P ++PT S SS+ + P ++P+S Sbjct: 209 VPTPSSSSVPFSSVPVSVPTPGSSSVPYTSV-PVSVPTPSSSSIPVSVPTPSSSSVPFSV 267
Query: 111 QLNKVSHIVV 82 S I V Sbjct: 268 PTPSSSTISV 277
>tr|B2VZU2|B2VZU2_PYRTR Putative uncharacterized protein OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=PTRG_02932 PE=4 SV=1 Length = 748
Score = 35.0 bits (79), Expect = 1.9 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2
Query: 282 QTNSSQVISQ-SIPPKATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQPLAMP 121 QTN + S +PP+ PPP S +P S + PT S + I P+ P Sbjct: 581 QTNVNPRASNLQLPPQQPPPPQSPRLPSYSAQAGGYPTSSTQPMNIASASPMYFP 635
>tr|A4WKL9|A4WKL9_PYRAR Putative uncharacterized protein OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1374 PE=4 SV=1 Length = 169
Score = 35.0 bits (79), Expect = 1.9 Identities = 25/78 (32%), Positives = 43/78 (55%) Frame = -2
Query: 306 TSIYVLLVQTNSSQVISQSIPPKATPPPMSSHIPKTSIKPTALPTHSCSSLRICFTQPLA 127 TS+Y+ L + S++ + ++ P +PPP ++ P TS+ TA P S ++ TQP A Sbjct: 17 TSLYLYLTRRRESRLFTLTVTPSPSPPPSTTPTP-TSLPTTATPPPSTAT----STQPHA 71
Query: 126 MPWSAQLNKVSHIVVDSL 73 P + L + IVV ++ Sbjct: 72 -PGTEFLIAAALIVVAAI 88
>tr|Q4RC32|Q4RC32_TETNG Chromosome undetermined SCAF20007, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00037156001 PE=4 SV=1 Length = 89
Score = 34.3 bits (77), Expect = 3.2 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = -2
Query: 279 TNSSQVISQSIPPKATPPPMSSHIPKTSIK------PTALPTHSCS 160 T + + S S P + PPP+SS TS PT+LPT SCS Sbjct: 2 TTARKAASSSSPSASPPPPLSSPSTVTSTSCSTSGVPTSLPTESCS 47
>tr|B6KJL5|B6KJL5_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49 GN=TGME49_031470 PE=4 SV=1 Length = 550
Score = 34.3 bits (77), Expect = 3.2 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 11/61 (18%) Frame = -1
Query: 256 PKHPTQGNTASNELTHSKNLNKANRPTHP-----------QLLFSSDMLYTTLGNAMECT 110 P H +G++ SN + + + + RP HP ++ D YTTLGN++ CT Sbjct: 68 PPHLNEGHS-SNMMAKVREMRRPARPFHPPSPPVAKSLGGKMKSQYDKFYTTLGNSVPCT 126
Query: 109 T 107 T Sbjct: 127 T 127
>tr|A6RAV2|A6RAV2_AJECN Predicted protein OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=HCAG_06090 PE=4 SV=1 Length = 652
Score = 34.3 bits (77), Expect = 3.2 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -2
Query: 258 SQSIPPKATPPPMSSHIPKTSI--KPTALPTHSCSSLRIC 145 +Q + P A+PPP SS + TS+ KP A PT S L C Sbjct: 227 NQGLVPSASPPPQSSTLSSTSLSTKPLAPPTPSLIELPTC 266
>tr|A2YC51|A2YC51_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22683 PE=4 SV=1 Length = 491
Score = 33.5 bits (75), Expect = 5.5 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -2
Query: 327 RKRAKTHTSIYVLLVQTNSSQVISQSIPPKATPPPMSSHIPKTSIKPTALP 175 R RA+ T ++Q +SS + S+ P A+PPP IP S+ P P Sbjct: 87 RDRARLRT-----ILQRSSSASAASSLAPYASPPPAMPPIPAVSVAPAPAP 132
>tr|Q16FP7|Q16FP7_AEDAE Cramped protein OS=Aedes aegypti GN=AAEL014683 PE=4 SV=1 Length = 827
Score = 33.5 bits (75), Expect = 5.5 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%) Frame = -2
Query: 297 YVLLVQTNSSQVISQSIPPKAT------PPPMSSHIPKTSIKPTALPTHSCSSLRICFTQ 136 YV L N+ + + I K+ PP + S P+ ++ P P SCS+ T Sbjct: 4 YVTLANVNNLIITNHKIDSKSLNVDPKPPPSVDSDDPEDNLSPAQPPAPSCST----ETV 59
Query: 135 PLAMPWSAQLNKVSHIVVDSL*HHLREACRPKIQNTPSEKL 13 P+A +A + + L H L + P +Q P+E+L Sbjct: 60 PIATSTAAPKSHCNSAAKAPLPHKLID---PSLQQIPTEEL 97
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