BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958685|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_K13, 5'
         (589 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4L4E7|HIS8_STAHJ Histidinol-phosphate aminotransferase OS=St...    32   1.8  
sp|Q0H8X2|BI1_USTMA Probable intron-encoded endonuclease bI1 OS=...    32   1.8  
sp|A3N186|METK_ACTP2 S-adenosylmethionine synthetase OS=Actinoba...    31   5.3  
sp|Q3UM89|FOXR2_MOUSE Forkhead box protein R2 OS=Mus musculus GN...    31   5.3  

>sp|Q4L4E7|HIS8_STAHJ Histidinol-phosphate aminotransferase
           OS=Staphylococcus haemolyticus (strain JCSC1435) GN=hisC
           PE=3 SV=1
          Length = 351

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +3

Query: 336 KPGIGGEKKRKGSNQRERQESPSAKQLINILTHELWYYHRASSQS 470
           K GI GE  +  SN+     SP AKQ +     EL+YY    S S
Sbjct: 23  KHGIEGELYKLASNENLYGPSPKAKQAVQAHLDELFYYPETGSPS 67


>sp|Q0H8X2|BI1_USTMA Probable intron-encoded endonuclease bI1
           OS=Ustilago maydis GN=bI1 PE=3 SV=2
          Length = 410

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +1

Query: 421 IYLHMNYGIITGHLVSPHAL-----VMVLIKLRSSQSCGLNSSDFYCFWN 555
           +YLH+  G+  G   SP  L     V++L+ + +    G N   + CF+N
Sbjct: 93  VYLHIGRGLYYGSYKSPRTLLWSIGVIILVLMMAIAFLGFNGQKYMCFYN 142


>sp|A3N186|METK_ACTP2 S-adenosylmethionine synthetase
           OS=Actinobacillus pleuropneumoniae serotype 5b (strain
           L20) GN=metK PE=3 SV=1
          Length = 383

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 304 HGSSKELLALDGLMSHIFRPMLHSIWTHERPALFLDPQG 188
           H S K+L+  +G+M  I +P+L S W  +    F++P G
Sbjct: 193 HVSQKDLV--EGVMEEIIKPVLPSEWLSQNTKYFINPTG 229


>sp|Q3UM89|FOXR2_MOUSE Forkhead box protein R2 OS=Mus musculus
           GN=Foxr2 PE=2 SV=1
          Length = 302

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 484 MVLIKLRSSQSCGLNSSDFYCFWNSHF 564
           +V + L+SS SCGLN    Y F   HF
Sbjct: 191 LVALALKSSPSCGLNVQQIYNFTRQHF 217

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958685|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_K13, 5'
         (589 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RMF8|A9RMF8_PHYPA ARID/BRIGHT DNA-binding domain-containing...    47   0.001
tr|A9TW59|A9TW59_PHYPA ARID/BRIGHT DNA-binding domain-containing...    42   0.034

>tr|A9RMF8|A9RMF8_PHYPA ARID/BRIGHT DNA-binding domain-containing
           protein OS=Physcomitrella patens subsp. patens
           GN=ARID1505 PE=4 SV=1
          Length = 844

 Score = 46.6 bits (109), Expect = 0.001
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +1

Query: 160 LDWVKRLALNPGDPRKGQGVRVSRWSEAWVGKCETLARRVREVLWK 297
           L+W+KR+A+ PG+P        S  ++ WV +C+ L  +VR VLWK
Sbjct: 307 LEWIKRIAMIPGNPPAALETDSSGKNDDWVSQCQMLTAKVRSVLWK 352


>tr|A9TW59|A9TW59_PHYPA ARID/BRIGHT DNA-binding domain-containing
           protein OS=Physcomitrella patens subsp. patens
           GN=ARID1506 PE=4 SV=1
          Length = 982

 Score = 41.6 bits (96), Expect = 0.034
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 160 LDWVKRLALNPGDPRKGQGVRVSRWSEAWVGKCETLARRVREVLWK 297
           ++W+KR+A+ PG+P            E W+ +C+ L  +VR  LW+
Sbjct: 446 VEWIKRIAIIPGNPASALDAGSPGQGEDWMSQCQMLTSKVRTALWR 491



 Score = 40.8 bits (94), Expect = 0.058
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 160 LDWVKRLALNPGDPRKGQGVRVSRWSEAWVGKCETLARRVREVLWK 297
           ++W+KR+A+ PG P            E W+  C+ L  +VR  LWK
Sbjct: 303 VEWIKRIAIIPGRPASAPDAGGPGQGEDWMSHCQLLTSKVRTALWK 348