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NBDC - LSDB Archive
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DK958727
Clone id TST39A01NGRL0002_M08
Library
Length 682
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_M08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGTCAACGAGCAGGCCTGCTCGAGCGGAGTTTGTTCGCCACTTGTCTCTCTAGACGAGGG
CTTGTAGCTTGCTGCTTCCATGGCGTCTACTGCCACTAGCCCTACTGTTGGCTCCGTCCA
GAATTTCACACCAGTAAATGGAACCCCCGTCCGTGTAAGGAGCACCGCTCCTGCTTCTGC
CTTCTTTGGGGCCTCCCTGAAGAAAACCGCCCCTTCCGTTGTATCTAGCAATATTGCCAA
GCATTTCGTTGTGCACGCTTCGGAGGATGAGGGCAAGCAGACGAAGAAGGACAGATGGGC
TGGTCTTGCATATGACACCTCCGATGACCAGCAAGACATCACTCGTGGAAAAGGCATGGT
GGACGCTCTTTTCCAAGGTGCAGTTGGTGTAGGAACTCAACACGCCGTCATGAGTTCGTA
TGACTATATTAGCCAGGGCCAGAGAATGTTCTCCATGGACAACATGAAGGATGGCTATTA
CATCGCCCCTGCCTTCATGGACAAACTGGTTGTGCACATTGCCAAGAACTTCATGAACTT
ACCAAATATCAAGGTGCCTTTGATTCTTGGTATTTGGGGTGGCAAGGGGCAAGGCAAGTC
CTTCCAGTGTGAGCTTGTCTTTTCAAAGTTGGGAATCAACCCAATCATGATGAGTGCCGG
AGAGCTCGAGAGTGGCAATGCT
■■Homology search results ■■ -
sp_hit_id Q7X999
Definition sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata
Align length 183
Score (bit) 254.0
E-value 2.0e-67
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958727|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_M08, 5'
         (682 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   254   2e-67
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   254   2e-67
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   247   4e-65
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   247   5e-65
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   246   6e-65
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   246   8e-65
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   244   2e-64
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   243   5e-64
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   243   7e-64
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   239   1e-62
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   238   3e-62
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   237   5e-62
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   236   8e-62
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   234   2e-61
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   222   1e-57
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   178   3e-44
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...   100   6e-21
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...   100   7e-21
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...    98   5e-20
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ...    39   0.020
sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus...    35   0.37 
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ...    33   1.1  
sp|Q7ZV79|UCK2B_DANRE Uridine-cytidine kinase 2-B OS=Danio rerio...    33   1.8  
sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A ...    33   1.8  
sp|Q7ZX23|KCY_XENLA UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE...    33   1.8  
sp|Q4KM73|KCY_RAT UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 P...    32   4.1  
sp|Q9DBP5|KCY_MOUSE UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1...    32   4.1  
sp|P30085|KCY_HUMAN UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1...    32   4.1  
sp|Q4L750|DHA_STAHJ Alanine dehydrogenase OS=Staphylococcus haem...    32   4.1  
sp|P08679|CISY2_YEAST Citrate synthase, peroxisomal OS=Saccharom...    32   4.1  

>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  254 bits (650), Expect = 2e-67
 Identities = 125/183 (68%), Positives = 147/183 (80%)
 Frame = +2

Query: 134 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 313
           +NG+  R  S  P++AFFG+SLKK+A     ++     +V     E +QT KD+W GLAY
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 314 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 493
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R +++DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 494 FMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 673
           FMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 674 GNA 682
           GNA
Sbjct: 197 GNA 199


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  254 bits (650), Expect = 2e-67
 Identities = 125/183 (68%), Positives = 147/183 (80%)
 Frame = +2

Query: 134 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 313
           +NG+  R  S  P++AFFG+SLKK+A     ++     +V     E +QT KD+W GLAY
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 314 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 493
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R +++DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 494 FMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 673
           FMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 674 GNA 682
           GNA
Sbjct: 197 GNA 199


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  247 bits (631), Expect = 4e-65
 Identities = 127/193 (65%), Positives = 147/193 (76%), Gaps = 1/193 (0%)
 Frame = +2

Query: 107 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFV-VHASEDEGKQT 283
           +GSV N  P N       ++ P+S F G+SLKK      +S ++   + + AS DE KQT
Sbjct: 8   IGSV-NRAPPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQT 66

Query: 284 KKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDN 463
            KDRW GLA+DTSDDQQDITRGKG VD+LFQ   G GT  A+MSSY+YIS G R ++ DN
Sbjct: 67  DKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDN 126

Query: 464 MKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINP 643
             DGYYIAPAFMDKLVVHI KNFM LPN+KVPLILGIWGGKGQGKSFQCELVF+K+ I+P
Sbjct: 127 NMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISP 186

Query: 644 IMMSAGELESGNA 682
           IMMSAGELESGNA
Sbjct: 187 IMMSAGELESGNA 199


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
          Length = 413

 Score =  247 bits (630), Expect = 5e-65
 Identities = 118/171 (69%), Positives = 139/171 (81%)
 Frame = +2

Query: 170 PASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRG 349
           P SAF G+ LK ++    S  +  +F + A +DE KQT+KD+W GLA+DTSDDQQDITRG
Sbjct: 26  PNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRG 85

Query: 350 KGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKN 529
           KG+ D LFQ  +G GT +AV+SSY+YIS G R +S DN  DG+YIAPAFMDKL VHI KN
Sbjct: 86  KGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKN 145

Query: 530 FMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 682
           F+ LPNIKVPLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 146 FLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 196


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  246 bits (629), Expect = 6e-65
 Identities = 126/179 (70%), Positives = 145/179 (81%), Gaps = 5/179 (2%)
 Frame = +2

Query: 161 STAPASAFFGASLKKTAPSVVSSNIAKH--FVVHASE---DEGKQTKKDRWAGLAYDTSD 325
           ++AP SAFFG SLKK   S V ++   +  F + A+E   +E +QT KDRW GLAYD SD
Sbjct: 25  ASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISD 84

Query: 326 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 505
           DQQDITRGKGMVD LFQ  +  GT +AVMSSY+Y+S G R   +DN+KDG+YIAPAF+DK
Sbjct: 85  DQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDK 142

Query: 506 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 682
           LVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 143 LVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 201


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  246 bits (628), Expect = 8e-65
 Identities = 127/180 (70%), Positives = 139/180 (77%), Gaps = 8/180 (4%)
 Frame = +2

Query: 167 APASA---FFGASLKKTAPSVV-----SSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTS 322
           APAS    F G  LKK   S V     SSNI +  V+    DEGKQT +DRW GLAYD S
Sbjct: 11  APASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDIS 70

Query: 323 DDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMD 502
           DDQQDITRGKG VD+LFQ   G GT  AV+SSY+Y+SQG R +  DN   G+YIAPAFMD
Sbjct: 71  DDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMD 130

Query: 503 KLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 682
           KLVVHI+KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 131 KLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 190


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  244 bits (624), Expect = 2e-64
 Identities = 127/200 (63%), Positives = 146/200 (73%), Gaps = 10/200 (5%)
 Frame = +2

Query: 113 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSS----NIAKHFVVHASE 265
           SV     VN TP+ + ++      P++AFFG +LKK     VSS    N +   V    +
Sbjct: 4   SVSTIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQID 63

Query: 266 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 442
            D  KQT  DRW GL  D SDDQQDITRGKGMVD+LFQ   G GT HAV+ SY+Y+SQG 
Sbjct: 64  VDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGL 123

Query: 443 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 622
           R +++DN  DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF
Sbjct: 124 RQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVF 183

Query: 623 SKLGINPIMMSAGELESGNA 682
            K+GINPIMMSAGELESGNA
Sbjct: 184 RKMGINPIMMSAGELESGNA 203


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
           PE=1 SV=2
          Length = 474

 Score =  243 bits (621), Expect = 5e-64
 Identities = 118/173 (68%), Positives = 137/173 (79%)
 Frame = +2

Query: 164 TAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDIT 343
           +APAS F G  +   +    S+  +       +  E KQT  DRW GLAYDTSDDQQDIT
Sbjct: 27  SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDIT 86

Query: 344 RGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIA 523
           RGKGMVD++FQ  +G GT HAV+SSY+Y+SQG R +++DNM DG+YIAPAFMDKLVVHI 
Sbjct: 87  RGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHIT 146

Query: 524 KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 682
           KNF+ LPNIKVPLILGIWGGKGQGKSFQCELV +K+GINPIMMSAGELESGNA
Sbjct: 147 KNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNA 199


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
           PE=2 SV=1
          Length = 441

 Score =  243 bits (620), Expect = 7e-64
 Identities = 120/179 (67%), Positives = 147/179 (82%), Gaps = 5/179 (2%)
 Frame = +2

Query: 161 STAPASAFFGASLKKTAPSVVSSN--IAKHFVVHASE---DEGKQTKKDRWAGLAYDTSD 325
           ++ P+SAFFG SLKK   S V ++   +  F + A++   +E +QT+ DRW GLAYD SD
Sbjct: 25  ASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSD 84

Query: 326 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 505
           DQQDITRGKG+VD+LFQ  +  GT +AV+SS+ Y+S G R ++ DN+KDG+YIAPAF+DK
Sbjct: 85  DQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDK 144

Query: 506 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 682
           LVVHIAKNFM LPNIKVPLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 145 LVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 203


>sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA
           PE=2 SV=1
          Length = 439

 Score =  239 bits (609), Expect = 1e-62
 Identities = 123/200 (61%), Positives = 144/200 (72%), Gaps = 10/200 (5%)
 Frame = +2

Query: 113 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSS-NIAKHFVVHASE--- 265
           SV      N  P+ + ++      P++AFFG +LKK     VSS  +    +  A+E   
Sbjct: 4   SVSTIGAANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKD 63

Query: 266 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 442
            D  KQT  DRW GL  D SDDQQDI RGKGMVD+LFQ   G GT HAV+ SY+Y+SQG 
Sbjct: 64  ADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGL 123

Query: 443 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 622
           R ++MDN  DG+YIAP+FMDKLVVHI KNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF
Sbjct: 124 RQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVF 183

Query: 623 SKLGINPIMMSAGELESGNA 682
            K+GINPIMMSAGELESGNA
Sbjct: 184 RKMGINPIMMSAGELESGNA 203
tr_hit_id A7NYV5
Definition tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 196
Score (bit) 260.0
E-value 7.0e-68
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958727|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_M08, 5'
         (682 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   260   7e-68
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   260   7e-68
tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten...   259   1e-67
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   254   5e-66
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car...   253   6e-66
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car...   253   6e-66
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul...   253   8e-66
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea...   253   8e-66
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea...   253   8e-66
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea...   253   8e-66
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   253   1e-65
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   251   3e-65
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   250   5e-65
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car...   249   9e-65
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car...   249   9e-65
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=...   249   9e-65
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul...   248   2e-64
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   246   7e-64
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc...   246   7e-64
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   246   7e-64
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza...   246   1e-63
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen...   246   1e-63
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t...   246   1e-63
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ...   245   2e-63
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   243   6e-63
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   243   6e-63
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar...   243   6e-63
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten...   243   8e-63
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   241   2e-62
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car...   241   2e-62

>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
           PE=4 SV=1
          Length = 472

 Score =  260 bits (664), Expect = 7e-68
 Identities = 133/196 (67%), Positives = 152/196 (77%), Gaps = 6/196 (3%)
 Frame = +2

Query: 113 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 274
           +V     VN TP+ + S+      P+SAFFG+SLKK +       IA   F V A  DE 
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 275 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 454
           +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S G R ++
Sbjct: 64  EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 455 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 634
           +DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183

Query: 635 INPIMMSAGELESGNA 682
           INPIMMSAGELESGNA
Sbjct: 184 INPIMMSAGELESGNA 199


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039112 PE=4 SV=1
          Length = 472

 Score =  260 bits (664), Expect = 7e-68
 Identities = 133/196 (67%), Positives = 152/196 (77%), Gaps = 6/196 (3%)
 Frame = +2

Query: 113 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 274
           +V     VN TP+ + S+      P+SAFFG+SLKK +       IA   F V A  DE 
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 275 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 454
           +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S G R ++
Sbjct: 64  EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 455 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 634
           +DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183

Query: 635 INPIMMSAGELESGNA 682
           INPIMMSAGELESGNA
Sbjct: 184 INPIMMSAGELESGNA 199


>tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_195670 PE=4 SV=1
          Length = 471

 Score =  259 bits (661), Expect = 1e-67
 Identities = 131/177 (74%), Positives = 146/177 (82%)
 Frame = +2

Query: 152 RVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQ 331
           RV+ST P+SAFFG   K +A   +     K  VV  +E E  +TK DRWAGL  D SDDQ
Sbjct: 17  RVKSTVPSSAFFGCKSKVSANGTLGIANGKSRVV--AEAESSKTKVDRWAGLGNDISDDQ 74

Query: 332 QDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLV 511
           QDI RGKGMVDALFQGA G+GTQ+A+MSS+ Y+SQGQR +SMDN+KDG YIAPAFMDKLV
Sbjct: 75  QDIQRGKGMVDALFQGAQGLGTQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLV 134

Query: 512 VHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 682
           +HIAKNFMNLP IKVPLILGIWGGKGQGKSFQCELV SKLGINPI+MSAGELESGNA
Sbjct: 135 IHIAKNFMNLPGIKVPLILGIWGGKGQGKSFQCELVMSKLGINPIVMSAGELESGNA 191


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
           PE=4 SV=1
          Length = 474

 Score =  254 bits (648), Expect = 5e-66
 Identities = 127/188 (67%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
 Frame = +2

Query: 122 NFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEGKQTKKDRW 298
           N  P+N       ++ P+SAF G SLKK +  +     +  +F V A  DE KQT KD+W
Sbjct: 12  NRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKW 71

Query: 299 AGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGY 478
            GLA+D SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSYDYIS G R +++DN  DG+
Sbjct: 72  KGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGF 131

Query: 479 YIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 658
           YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA
Sbjct: 132 YIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 191

Query: 659 GELESGNA 682
           GELESGNA
Sbjct: 192 GELESGNA 199


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase small protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 437

 Score =  253 bits (647), Expect = 6e-66
 Identities = 130/197 (65%), Positives = 150/197 (76%), Gaps = 7/197 (3%)
 Frame = +2

Query: 113 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 271
           +V     +N  P+ +       ST P SAFFG SLKK A    +  + +  F V A  DE
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 272 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 451
            KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G R +
Sbjct: 64  NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 452 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 631
            ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 632 GINPIMMSAGELESGNA 682
           GI PIMMSAGELESGNA
Sbjct: 183 GITPIMMSAGELESGNA 199


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase large protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 474

 Score =  253 bits (647), Expect = 6e-66
 Identities = 130/197 (65%), Positives = 150/197 (76%), Gaps = 7/197 (3%)
 Frame = +2

Query: 113 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 271
           +V     +N  P+ +       ST P SAFFG SLKK A    +  + +  F V A  DE
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 272 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 451
            KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G R +
Sbjct: 64  NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 452 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 631
            ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 632 GINPIMMSAGELESGNA 682
           GI PIMMSAGELESGNA
Sbjct: 183 GITPIMMSAGELESGNA 199


>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 476

 Score =  253 bits (646), Expect = 8e-66
 Identities = 133/194 (68%), Positives = 151/194 (77%), Gaps = 2/194 (1%)
 Frame = +2

Query: 107 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASEDEGKQ 280
           VG+V N  P+        ST P SAFFG SLKK + S   +S I+   F V A  DE KQ
Sbjct: 8   VGAV-NTAPLALNGSGAGSTVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQ 66

Query: 281 TKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMD 460
           T KDRW GL  D SDDQQDITRGKGMVD+LFQ   G GT + ++SSY+Y+SQG R +++D
Sbjct: 67  TDKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGLRTYNLD 126

Query: 461 NMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGIN 640
           N  DGYYIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GIN
Sbjct: 127 NNMDGYYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGIN 186

Query: 641 PIMMSAGELESGNA 682
           PIMMSAGELESGNA
Sbjct: 187 PIMMSAGELESGNA 200


>tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 363

 Score =  253 bits (646), Expect = 8e-66
 Identities = 125/191 (65%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
 Frame = +2

Query: 113 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 289
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 290 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 469
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 470 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIM 649
           DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLGINPIM
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIM 191

Query: 650 MSAGELESGNA 682
           MSAGELESG+A
Sbjct: 192 MSAGELESGDA 202


>tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 440

 Score =  253 bits (646), Expect = 8e-66
 Identities = 125/191 (65%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
 Frame = +2

Query: 113 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 289
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 290 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 469
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 470 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIM 649
           DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLGINPIM
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIM 191

Query: 650 MSAGELESGNA 682
           MSAGELESG+A
Sbjct: 192 MSAGELESGDA 202


>tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 480

 Score =  253 bits (646), Expect = 8e-66
 Identities = 125/191 (65%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
 Frame = +2

Query: 113 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 289
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 290 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 469
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 470 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIM 649
           DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLGINPIM
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIM 191

Query: 650 MSAGELESGNA 682
           MSAGELESG+A
Sbjct: 192 MSAGELESGDA 202