DK958742 |
Clone id |
TST39A01NGRL0002_M24 |
Library |
TST39 |
Length |
703 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_M24. 5' end sequence. |
Accession |
DK958742 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2589Contig1 |
Sequence |
GCCCGTGCATGCCTAGCTTGGATGAGATCTATGCTTTGAGACAACTTAGATCTGCCCATA CAGCGAACAGGAAGGGAGGGCGAGCATGGCGTGTTTGGCTGTATCGCTCCAGCCCGTAAA CGGGCCAGACTTGCTACTGCAGACCAGAGAATGGTTCCCTCCTGCAAGAGGCTTGTTAGC ATCTTCCAAGTTTAGAGAAACCCGCGAGACGTACGCAGCAGGAAAGCGCGCAGGAACATC CCCATCGGCAACAACAGCGACAGCAGAAAACTCAGCTATGGTGGAGGGCCTTGGCGATGA AGCCCTCGCAGCCTCTGGTGGGCATGTAATCGTTGGTAAGGAAACCAAATTTAGAGTTTT CTATCGCCTTGTTAACAATATCTATGTGCTTGCCATTACTAGTGCGGAAAATGATCGTGA TGATCTGCCTGCCAATGCATTTGAGTGTGCGGGTATTGTGAATCAAGCAGTTAGCGTGCT TGTCGCAGCCTGCAAGGGCATTGATGTTACCTCTGAGAAGGTTATACGCAAATATACGGA GATCTACATGGCTCTTGATGTAGTATTGAGAGGTGTAAGCGCAGCCCGCTTGTCCACCAT TCTAGCTAGCATTCATGGTGAGGGTATCCCGCAAATGGTTCTTTCTGCTACAGATGCAGA AAATCGCGCAAGGGGAGCTGAGAGTTGGTATATTGCTAAATCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FKS4 |
Definition |
sp|Q9FKS4|ATR_ARATH Serine/threonine-protein kinase ATR OS=Arabidopsis thaliana |
Align length |
60 |
Score (bit) |
32.0 |
E-value |
3.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U164 |
Definition |
tr|A9U164|A9U164_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
206 |
Score (bit) |
251.0 |
E-value |
4.0e-65 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958742|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_M24, 5' (703 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U164|A9U164_PHYPA Predicted protein OS=Physcomitrella paten... 251 4e-65 tr|A7Q6E7|A7Q6E7_VITVI Chromosome chr11 scaffold_56, whole genom... 226 1e-57 tr|A5AR42|A5AR42_VITVI Putative uncharacterized protein OS=Vitis... 224 5e-57 tr|Q9FKM4|Q9FKM4_ARATH Arabidopsis thaliana genomic DNA, chromos... 213 1e-53 tr|Q6Z0T9|Q6Z0T9_ORYSJ Os08g0243900 protein OS=Oryza sativa subs... 204 6e-51 tr|A2YSV1|A2YSV1_ORYSI Putative uncharacterized protein OS=Oryza... 204 6e-51 tr|A3BR28|A3BR28_ORYSJ Putative uncharacterized protein OS=Oryza... 170 9e-41 tr|Q54E64|Q54E64_DICDI Putative uncharacterized protein OS=Dicty... 46 0.002 tr|A8HQB9|A8HQB9_CHLRE Predicted protein OS=Chlamydomonas reinha... 37 0.95 tr|B7GT46|B7GT46_BIFLO Alkaline phosphatase OS=Bifidobacterium l... 37 1.6
>tr|A9U164|A9U164_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227387 PE=4 SV=1 Length = 631
Score = 251 bits (640), Expect = 4e-65 Identities = 133/206 (64%), Positives = 153/206 (74%) Frame = +2
Query: 86 MACLAVSLQPVNGPDLLLQTREWFPPARGLLASSKFRETRETYAAGKRXXXXXXXXXXXX 265 MACLA+SLQPVNG D+LLQTREWFPPAR LA+ FR TR YA K Sbjct: 1 MACLALSLQPVNGADVLLQTREWFPPARAALATYSFRVTRLAYANNKHDPLDG------- 53
Query: 266 XXXXMVEGLGDEALAASGGHVIVGKETKFRVFYRLVNNIYVLAITSAENDRDDLPANAFE 445 + GLGDEALAAS G V+VGKE+KFRV YRLVN +YVL ITSA+ D D N FE Sbjct: 54 ----LGPGLGDEALAASSGQVVVGKESKFRVVYRLVNTVYVLGITSADLDDD---TNIFE 106
Query: 446 CAGIVNQAVSVLVAACKGIDVTSEKVIRKYTEIYMALDVVLRGVSAARLSTILASIHGEG 625 CAG VNQAVSVLVAACKG+DVT++K+ RKYTE+YMALDVVL GVSAARLSTILA+ HGE Sbjct: 107 CAGTVNQAVSVLVAACKGVDVTADKISRKYTEVYMALDVVLHGVSAARLSTILATFHGES 166
Query: 626 IPQMVLSATDAENRARGAESWYIAKS 703 + M+ SAT+ EN+ARGA+SW K+ Sbjct: 167 VNNMITSATEIENKARGADSWNQVKT 192
>tr|A7Q6E7|A7Q6E7_VITVI Chromosome chr11 scaffold_56, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031365001 PE=4 SV=1 Length = 597
Score = 226 bits (575), Expect = 1e-57 Identities = 117/201 (58%), Positives = 146/201 (72%) Frame = +2
Query: 86 MACLAVSLQPVNGPDLLLQTREWFPPARGLLASSKFRETRETYAAGKRXXXXXXXXXXXX 265 M+CLA+SLQP NGPD+LLQTREWFPPAR L+A S FR+TR+ +AAGK Sbjct: 1 MSCLALSLQPANGPDILLQTREWFPPARALVALSAFRQTRQAFAAGKHQSAEDGD----- 55
Query: 266 XXXXMVEGLGDEALAASGGHVIVGKETKFRVFYRLVNNIYVLAITSAENDRDDLPANAFE 445 LGD+ LAAS G +IVG E+++RV YRLVN IYVL IT+ + D N FE Sbjct: 56 ------SSLGDDPLAASSGQLIVGVESRYRVVYRLVNGIYVLGITTVDYDLG--VNNVFE 107
Query: 446 CAGIVNQAVSVLVAACKGIDVTSEKVIRKYTEIYMALDVVLRGVSAARLSTILASIHGEG 625 C GIVNQAVSV+VAAC+G+DVT +K+ RKY EIYMALD+VLRGVS+ RL+ +LAS+H + Sbjct: 108 CIGIVNQAVSVVVAACRGVDVTPDKLNRKYAEIYMALDIVLRGVSSIRLAAMLASMHSDS 167
Query: 626 IPQMVLSATDAENRARGAESW 688 I +MV SA D E++ RGAE+W Sbjct: 168 IAKMVHSAIDTESKIRGAENW 188
>tr|A5AR42|A5AR42_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027870 PE=4 SV=1 Length = 617
Score = 224 bits (570), Expect = 5e-57 Identities = 116/201 (57%), Positives = 145/201 (72%) Frame = +2
Query: 86 MACLAVSLQPVNGPDLLLQTREWFPPARGLLASSKFRETRETYAAGKRXXXXXXXXXXXX 265 M+CLA+SLQP NGPD+LLQTREWFPPAR L+A S FR+TR+ +AAGK Sbjct: 1 MSCLALSLQPANGPDILLQTREWFPPARALVALSAFRQTRQAFAAGKHQSAEDGD----- 55
Query: 266 XXXXMVEGLGDEALAASGGHVIVGKETKFRVFYRLVNNIYVLAITSAENDRDDLPANAFE 445 LGD+ LAAS G +IVG E+++RV YRLVN IYVL IT+ + D N FE Sbjct: 56 ------SSLGDDPLAASSGQLIVGVESRYRVVYRLVNGIYVLGITTVDYDLG--VNNVFE 107
Query: 446 CAGIVNQAVSVLVAACKGIDVTSEKVIRKYTEIYMALDVVLRGVSAARLSTILASIHGEG 625 C GIVNQAV V+VAAC+G+DVT +K+ RKY EIYMALD+VLRGVS+ RL+ +LAS+H + Sbjct: 108 CIGIVNQAVXVVVAACRGVDVTPDKLNRKYAEIYMALDIVLRGVSSIRLAAMLASMHSDS 167
Query: 626 IPQMVLSATDAENRARGAESW 688 I +MV SA D E++ RGAE+W Sbjct: 168 IAKMVHSAIDTESKIRGAENW 188
>tr|Q9FKM4|Q9FKM4_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 (Putative uncharacterized protein At5g57460) (At5g57460) OS=Arabidopsis thaliana GN=At5g57460 PE=2 SV=1 Length = 646
Score = 213 bits (542), Expect = 1e-53 Identities = 112/220 (50%), Positives = 146/220 (66%), Gaps = 14/220 (6%) Frame = +2
Query: 86 MACLAVSLQPVNGPDLLLQTREWFPPARGLLASSKFRETRETYAAGKRXXXXXXXXXXXX 265 M+CLA++LQP NG D+LLQTREWFPPAR L+A S FR+ R+ A+ K+ Sbjct: 1 MSCLALALQPANGSDILLQTREWFPPARALIALSYFRQMRQALASSKQQHQQQSNQKQNQ 60
Query: 266 XXXXM--------------VEGLGDEALAASGGHVIVGKETKFRVFYRLVNNIYVLAITS 403 E +GD+ LAAS G VIVG E+K+RV YRLVN+IY+L +T Sbjct: 61 ASSSSSSSSSVADPDDATAAEFVGDDPLAASNGQVIVGVESKYRVVYRLVNSIYILGVTV 120
Query: 404 AENDRDDLPANAFECAGIVNQAVSVLVAACKGIDVTSEKVIRKYTEIYMALDVVLRGVSA 583 A++D N FEC IVNQAVSV+V AC+G++VT EK+ RKY E+YMALD+VLRGVS Sbjct: 121 ADHDNS---INVFECIHIVNQAVSVIVTACRGVEVTPEKLGRKYAEVYMALDIVLRGVSN 177
Query: 584 ARLSTILASIHGEGIPQMVLSATDAENRARGAESWYIAKS 703 RL+ +L ++HG+GI +MV SA D EN+ RGA+SW +S Sbjct: 178 IRLAAMLGAMHGDGIAKMVHSALDTENKIRGADSWMAVES 217
>tr|Q6Z0T9|Q6Z0T9_ORYSJ Os08g0243900 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0070J06.32 PE=2 SV=1 Length = 641
Score = 204 bits (518), Expect = 6e-51 Identities = 108/201 (53%), Positives = 140/201 (69%) Frame = +2
Query: 86 MACLAVSLQPVNGPDLLLQTREWFPPARGLLASSKFRETRETYAAGKRXXXXXXXXXXXX 265 MACLA+SLQPVNGPD+LLQTR WFP +R L A S FR R A GK+ Sbjct: 1 MACLAISLQPVNGPDILLQTRSWFPVSRALAAVSSFRLARLHLARGKQQQLSSSSSAAAA 60
Query: 266 XXXXMVEGLGDEALAASGGHVIVGKETKFRVFYRLVNNIYVLAITSAENDRDDLPANAFE 445 +E +GD+ LAA G ++VG E+++RV YRLVN+IYVL +T++ +D +AF Sbjct: 61 AAT--LEAIGDDPLAAGSGQLVVGVESQYRVVYRLVNSIYVLGVTTS-SDHASPAVHAFA 117
Query: 446 CAGIVNQAVSVLVAACKGIDVTSEKVIRKYTEIYMALDVVLRGVSAARLSTILASIHGEG 625 A VNQAVSV+VAAC+G+DVT EKV RKY E+Y+ALD+VL GV + RLS ILA+IHG+ Sbjct: 118 VADAVNQAVSVVVAACRGVDVTPEKVHRKYPEVYLALDLVLHGVGSVRLSQILATIHGDN 177
Query: 626 IPQMVLSATDAENRARGAESW 688 + +MV S+ DAE +ARGA+ W Sbjct: 178 LARMVNSSPDAEAKARGADPW 198
>tr|A2YSV1|A2YSV1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28397 PE=4 SV=1 Length = 640
Score = 204 bits (518), Expect = 6e-51 Identities = 108/201 (53%), Positives = 140/201 (69%) Frame = +2
Query: 86 MACLAVSLQPVNGPDLLLQTREWFPPARGLLASSKFRETRETYAAGKRXXXXXXXXXXXX 265 MACLA+SLQPVNGPD+LLQTR WFP +R L A S FR R A GK+ Sbjct: 1 MACLAISLQPVNGPDILLQTRSWFPVSRALAAVSSFRLARLHLARGKQQQLSSSSAAAAA 60
Query: 266 XXXXMVEGLGDEALAASGGHVIVGKETKFRVFYRLVNNIYVLAITSAENDRDDLPANAFE 445 +E +GD+ LAA G ++VG E+++RV YRLVN+IYVL +T++ +D +AF Sbjct: 61 AT---LEAIGDDPLAAGSGQLVVGVESQYRVVYRLVNSIYVLGVTTS-SDHASPAVHAFA 116
Query: 446 CAGIVNQAVSVLVAACKGIDVTSEKVIRKYTEIYMALDVVLRGVSAARLSTILASIHGEG 625 A VNQAVSV+VAAC+G+DVT EKV RKY E+Y+ALD+VL GV + RLS ILA+IHG+ Sbjct: 117 VADAVNQAVSVVVAACRGVDVTPEKVHRKYPEVYLALDLVLHGVGSVRLSQILATIHGDN 176
Query: 626 IPQMVLSATDAENRARGAESW 688 + +MV S+ DAE +ARGA+ W Sbjct: 177 LARMVNSSPDAEAKARGADPW 197
>tr|A3BR28|A3BR28_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025500 PE=4 SV=1 Length = 622
Score = 170 bits (430), Expect = 9e-41 Identities = 97/201 (48%), Positives = 125/201 (62%) Frame = +2
Query: 86 MACLAVSLQPVNGPDLLLQTREWFPPARGLLASSKFRETRETYAAGKRXXXXXXXXXXXX 265 MACLA+SLQPVNGPD+LLQTR WFP +R L A S FR R A GK+ Sbjct: 1 MACLAISLQPVNGPDILLQTRSWFPVSRALAAVSSFRLARLHLARGKQ--QQLSSSSSAA 58
Query: 266 XXXXMVEGLGDEALAASGGHVIVGKETKFRVFYRLVNNIYVLAITSAENDRDDLPANAFE 445 +E +GD+ LAA G ++VG E+++RV YRLVN+IYVL +T++ +D +AF Sbjct: 59 AAAATLEAIGDDPLAAGSGQLVVGVESQYRVVYRLVNSIYVLGVTTS-SDHASPAVHAFA 117
Query: 446 CAGIVNQAVSVLVAACKGIDVTSEKVIRKYTEIYMALDVVLRGVSAARLSTILASIHGEG 625 A VNQAVSV+VAAC+G+DVT EKV RKY E ILA+IHG+ Sbjct: 118 VADAVNQAVSVVVAACRGVDVTPEKVHRKYPE-------------------ILATIHGDN 158
Query: 626 IPQMVLSATDAENRARGAESW 688 + +MV S+ DAE +ARGA+ W Sbjct: 159 LARMVNSSPDAEAKARGADPW 179
>tr|Q54E64|Q54E64_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0191600 PE=4 SV=1 Length = 563
Score = 46.2 bits (108), Expect = 0.002 Identities = 27/75 (36%), Positives = 46/75 (61%) Frame = +2
Query: 350 FRVFYRLVNNIYVLAITSAENDRDDLPANAFECAGIVNQAVSVLVAACKGIDVTSEKVIR 529 +RV+Y ++N +++LAI+ A + N FE + + +A VL + K D T+ ++ + Sbjct: 66 YRVYYMILNELFILAISQAND-------NPFEGSIYLARAKRVLWSVSK--DFTTTQINK 116
Query: 530 KYTEIYMALDVVLRG 574 KYTE+Y AL+ VL G Sbjct: 117 KYTEVYFALERVLFG 131
>tr|A8HQB9|A8HQB9_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_146504 PE=4 SV=1 Length = 583
Score = 37.4 bits (85), Expect = 0.95 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 16/90 (17%) Frame = +2
Query: 446 CAGIVNQAVSVLVAACKG---IDVTSEKVIRKYTEIYMALDVVL-------RGVSAARLS 595 C ++ Q V V++ +G ++T+E++ RK+ E+Y+A+D +L G + AR + Sbjct: 75 CVQLLGQVVRVVMGPAEGKAAAELTAERLQRKFGEVYLAVDALLGSGGILEAGAALARAN 134
Query: 596 TILASIH------GEGIPQMVLSATDAENR 667 L +H E P+ V A+ R Sbjct: 135 ATLEQLHDKSKVAAEAAPKQVPKQQQAKRR 164
>tr|B7GT46|B7GT46_BIFLO Alkaline phosphatase OS=Bifidobacterium longum subsp. infantis ATCC 15697 GN=Blon_0140 PE=3 SV=1 Length = 692
Score = 36.6 bits (83), Expect = 1.6 Identities = 32/105 (30%), Positives = 46/105 (43%) Frame = +2
Query: 377 NIYVLAITSAENDRDDLPANAFECAGIVNQAVSVLVAACKGIDVTSEKVIRKYTEIYMAL 556 N ++L + A D+ D ANA G + + A K +D+T+ VI T + Sbjct: 381 NGFLLQVEGASIDKQDHAANACGQIGETDDFDQAIAYAIKNVDLTNTLVI--VTADHAHT 438
Query: 557 DVVLRGVSAARLSTILASIHGEGIPQMVLSATDAENRARGAESWY 691 VL A LST+L S G MV+S A+ + AE Y Sbjct: 439 SQVLNAQPAYALSTVLKSADGN---NMVVSYGTAQAASTDAEGGY 480
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