Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958770|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_O04, 5' (716 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 431 e-120 sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 367 e-101 sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 365 e-100 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 365 e-100 sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 364 e-100 sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 363 e-100 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 363 e-100 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 362 e-100 sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 362 e-100 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 362 1e-99 sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 361 2e-99 sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 361 2e-99 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 360 3e-99 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 360 3e-99 sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 360 4e-99 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 360 6e-99 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 360 6e-99 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 359 9e-99 sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 358 1e-98 sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro... 358 2e-98 sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 357 3e-98 sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 357 3e-98 sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 357 3e-98 sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 357 4e-98 sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 357 5e-98 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 356 6e-98 sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 356 8e-98 sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 356 8e-98 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 355 1e-97 sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 355 1e-97
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1 Length = 265
Score = 431 bits (1108), Expect = e-120 Identities = 213/225 (94%), Positives = 221/225 (98%), Gaps = 1/225 (0%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 221 MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG Sbjct: 1 MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59
Query: 222 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 401 PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA Sbjct: 60 PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119
Query: 402 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 581 KNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG Sbjct: 120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179
Query: 582 PLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 PLGEVEDPIYPGGSFDPLGLADDPEAFAEL+VKELKNGRLAMFSM Sbjct: 180 PLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 224
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1 Length = 269
Score = 367 bits (943), Expect = e-101 Identities = 181/227 (79%), Positives = 200/227 (88%), Gaps = 3/227 (1%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLY 215 MAA TA S+++ +KPVNELSRKV G EARV M S+GS IWYG+DRP + Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60
Query: 216 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 395 LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 396 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 575 LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180
Query: 576 GGPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 GGPLGEV DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 227
Score = 31.2 bits (69), Expect = 5.9 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = +3
Query: 228 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 407 +G P +T +D GL+ DP+TFA+ + E+ + R AM G ++ Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
Query: 408 G 410 G Sbjct: 240 G 240
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1 Length = 262
Score = 365 bits (938), Expect = e-100 Identities = 180/229 (78%), Positives = 199/229 (86%), Gaps = 5/229 (2%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGA-GEARVQMMA----PKKSSSGSIWYGSDRP 209 MAA+T ++SS+ +G +K VG+ GE R+ M PK ++SGS WYG DR Sbjct: 1 MAASTMAISSTAMAGTPIK--------VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRV 52
Query: 210 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 389 YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P Sbjct: 53 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 112
Query: 390 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 569 ELL++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR Sbjct: 113 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 172
Query: 570 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 +AGGPLGEV DP+YPGGSFDPLGLADDPEAFAEL+VKELKNGRLAMFSM Sbjct: 173 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 221
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1 Length = 267
Score = 365 bits (937), Expect = e-100 Identities = 179/226 (79%), Positives = 195/226 (86%), Gaps = 2/226 (0%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKK--SSSGSIWYGSDRPLYL 218 MA +T +LSSS F+G+ +K S G G ++ A K +SSGS WYG DR YL Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60
Query: 219 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 398 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 399 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 578 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
Query: 579 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 GPLGEV DP+YPGGSFDPLGLADDPEAFAEL+VKE+KNGRLAMFSM Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 226
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1 Length = 265
Score = 364 bits (935), Expect = e-100 Identities = 179/229 (78%), Positives = 199/229 (86%), Gaps = 5/229 (2%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 209 MA++T +LSS+ F+G+ + + L GEARV M A +SSGS WYG DR Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSLF-----GEARVTMRKTAAKAKPAASSGSPWYGPDRV 55
Query: 210 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 389 LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P Sbjct: 56 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 390 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 569 ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYR Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYR 175
Query: 570 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 VAGGPLGEV DP+YPGG+FDPLGLADDPEAFA+++VKELKNGRLAMFSM Sbjct: 176 VAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSM 224
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1 Length = 266
Score = 363 bits (933), Expect = e-100 Identities = 181/228 (79%), Positives = 195/228 (85%), Gaps = 4/228 (1%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 212 MAATT SLSSS F+G K V L G+ARV M K+ SS S WYGSDR L Sbjct: 1 MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57
Query: 213 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 392 YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE Sbjct: 58 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 393 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 572 LLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+LAIWACQV+LMGAVEGYR+ Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRI 177
Query: 573 AGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 AGGPLGE+ DP+YPGGSFDPLGLA+ P+AFAEL+VKE+KNGRLAMFSM Sbjct: 178 AGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSM 225
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1 Length = 267
Score = 363 bits (931), Expect = e-100 Identities = 179/226 (79%), Positives = 195/226 (86%), Gaps = 2/226 (0%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 218 MAA+T +LSS F+G+ +K S G G+ ++ A K SSGS WYG DR YL Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60
Query: 219 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 398 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 399 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 578 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 579 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 GPLGEV DP+YPGGSFDPLGLA+DPEAFAEL+VKE+KNGRLAMFSM Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSM 226
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1 Length = 265
Score = 362 bits (930), Expect = e-100 Identities = 176/224 (78%), Positives = 191/224 (85%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 224 MAA T +LSS F+GQ +K S G G ++ K + S S WYG DR YLGP Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 225 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 404 FSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+ Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 405 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 584 NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGP Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 585 LGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 LGEV DP+YPGGSFDPLGLA+DPEAFAEL+VKE+KNGRLAMFSM Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSM 224
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1 Length = 267
Score = 362 bits (930), Expect = e-100 Identities = 179/226 (79%), Positives = 193/226 (85%), Gaps = 2/226 (0%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEA--RVQMMAPKKSSSGSIWYGSDRPLYL 218 M A+T +LSS F+G +K S G G+A R + K SSGS WYG DR YL Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 219 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 398 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 399 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 578 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGA+EGYRVAG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 579 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 GPLGEV DP+YPGGSFDPLGLADDPEAFAEL+VKE+KNGRLAMFSM Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 226
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1 Length = 265
Score = 362 bits (928), Expect = 1e-99 Identities = 177/224 (79%), Positives = 190/224 (84%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 224 MAA T +LSS F+GQ +K G G ++ K +S S WYG DR YLGP Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60
Query: 225 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 404 FSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+ Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 405 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 584 NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180
Query: 585 LGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 LGEV DP+YPGGSFDPLGLA+DPEAFAEL+VKE+KNGRLAMFSM Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSM 224
|
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958770|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_O04, 5' (716 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 381 e-104 tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 380 e-104 tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 378 e-103 tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 377 e-103 tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 377 e-103 tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 376 e-103 tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 376 e-103 tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 374 e-102 tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 374 e-102 tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 373 e-102 tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 372 e-101 tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T... 371 e-101 tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 370 e-101 tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote... 370 e-101 tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin... 369 e-101 tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind... 369 e-100 tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ... 368 e-100 tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 368 e-100 tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 367 e-100 tr|A8QJP9|A8QJP9_BAMOL Chloroplast light-harvesting chlorophyll ... 367 e-100 tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 366 e-100 tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 365 1e-99 tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 365 1e-99 tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu... 365 2e-99 tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ... 365 2e-99 tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 365 2e-99 tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC... 365 2e-99 tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O... 364 3e-99 tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 364 3e-99 tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu... 364 4e-99
>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1 Length = 263
Score = 381 bits (978), Expect = e-104 Identities = 186/224 (83%), Positives = 200/224 (89%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 224 MAA TA S+++ LKPVNELSRKVG EARV M K S S SIWYG+DRP +LGP Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58
Query: 225 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 404 FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118
Query: 405 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 584 NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178
Query: 585 LGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 LGEV DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 222
>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1 Length = 265
Score = 380 bits (977), Expect = e-104 Identities = 183/224 (81%), Positives = 202/224 (90%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 224 MAA TA S+++ LKPVNELSRKVG+ EARV M KS+S SIWYG+DRP YLGP Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60
Query: 225 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 404 FSG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK Sbjct: 61 FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 120
Query: 405 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 584 +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGP Sbjct: 121 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGP 180
Query: 585 LGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 LGE+ DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 224
>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding protein 2 (Predicted protein) OS=Physcomitrella patens subsp. patens GN=PpLhcb2 PE=4 SV=1 Length = 267
Score = 378 bits (970), Expect = e-103 Identities = 184/226 (81%), Positives = 201/226 (88%), Gaps = 2/226 (0%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 218 MAA TA S+++ LKPVNELSRKVG+ +ARV M S+GS IWYG+DRP YL Sbjct: 1 MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60
Query: 219 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 398 GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120
Query: 399 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 578 AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
Query: 579 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 GPLGEV DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 226
>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1 Length = 263
Score = 377 bits (969), Expect = e-103 Identities = 183/224 (81%), Positives = 201/224 (89%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 224 MAA TA S+++ LKPVNELSR+VGA EARV M K + S SIWYG+DRP +LGP Sbjct: 1 MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58
Query: 225 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 404 FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 118
Query: 405 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 584 +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP Sbjct: 119 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178
Query: 585 LGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 LGEV DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 222
>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1 Length = 265
Score = 377 bits (968), Expect = e-103 Identities = 183/224 (81%), Positives = 198/224 (88%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 224 MAA TA S+++ LKPVNELSRKVG EAR+ M SS SIWYG+DRP YLGP Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60
Query: 225 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 404 FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK Sbjct: 61 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 120
Query: 405 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 584 NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 180
Query: 585 LGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 LG+V DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 181 LGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 224
>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physcomitrella patens PE=2 SV=1 Length = 268
Score = 376 bits (966), Expect = e-103 Identities = 183/227 (80%), Positives = 203/227 (89%), Gaps = 3/227 (1%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 215 MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP + Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60
Query: 216 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 395 LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 396 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 575 LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180
Query: 576 GGPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 GGPLG+V DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 227
>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1 Length = 268
Score = 376 bits (966), Expect = e-103 Identities = 183/227 (80%), Positives = 203/227 (89%), Gaps = 3/227 (1%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 215 MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP + Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60
Query: 216 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 395 LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 396 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 575 LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180
Query: 576 GGPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 GGPLG+V DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 227
>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1 Length = 263
Score = 374 bits (960), Expect = e-102 Identities = 185/224 (82%), Positives = 200/224 (89%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 224 MAA TA+ S+++ LK +NELSRKVG +ARV M K SSS SIWYG+DRP YLGP Sbjct: 1 MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58
Query: 225 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 404 SG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK Sbjct: 59 LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118
Query: 405 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 584 NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP Sbjct: 119 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 178
Query: 585 LGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 LGEV DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 222
>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1 Length = 267
Score = 374 bits (960), Expect = e-102 Identities = 184/226 (81%), Positives = 201/226 (88%), Gaps = 2/226 (0%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 218 MAA TA S+++ LKPVNELSRKVG EARV M A K ++S SIWYG+DRP YL Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60
Query: 219 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 398 GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120
Query: 399 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 578 AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAG 180
Query: 579 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 GPLG+V DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 181 GPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 226
>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1 Length = 267
Score = 373 bits (958), Expect = e-102 Identities = 182/226 (80%), Positives = 200/226 (88%), Gaps = 2/226 (0%) Frame = +3
Query: 45 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 218 MA TA S+++ LKPVNELSRKVG EARV M K + S SIWYG+DRP +L Sbjct: 1 MAGATAMHSTALAGQGVLKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFL 60
Query: 219 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 398 GPFSG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELL Sbjct: 61 GPFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELL 120
Query: 399 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 578 AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 579 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELRVKELKNGRLAMFSM 716 GPLGEV DPIYPGGSFDPLGLADDP+ FAEL+VKE+KNGRLAMFSM Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 226
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