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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK958773
Clone id TST39A01NGRL0002_O07
Library
Length 524
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_O07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGTACCCTTCCCCTTCTCTCCTGCTTGTTAGTGTCTACCTTGTTTGTCTGTGTTTGCCGT
AGCTCAGCTGCAGCTTTCGATGCTTCCACAGTGAAGACCTCTCACTCCTTCGACTCCTAC
GACTTGTTCATGGAGCTTTCGCCCGTTGCCGAGCAGAAAACTGTGAGCACCCGCAAGCAA
GCTGCCGGATCCTCCTCCAAGGACAGCACCCCCCACATGAAGGTCGGCAAGGAATATGCC
TTGTGCAAGGCCACCTCATCCTCCTGCCTCGGGAATCAACTCTCTTGCTCCACCTCTTGC
TTGGACGGTTTCTATGGTGGAGGCTATGGACCCGGATATGGCTATGGAGGTGGCTATGGG
CGGGGCTACGGAGGCGGTTATGGACGTGGTTATGGCTATGGTCCTGGCTATGGCTATGGT
CGTGGTGGTGGAGGTGGCGGCGGTGGAGGTGGTAGTTTTGGGGGTGGAGGTGGTGGCGGT
GGCGGTGGTGGTGGTGGCGGTGGTGGTGGTGGAGGTGGTTGGCG
■■Homology search results ■■ -
sp_hit_id Q8TB68
Definition sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens
Align length 65
Score (bit) 33.9
E-value 0.48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958773|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_O07, 5'
         (524 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=P...    34   0.48 
sp|Q9EPX2|PPN_MOUSE Papilin OS=Mus musculus GN=Papln PE=2 SV=1         30   5.3  
sp|A5D7S3|TRM1L_BOVIN TRM1-like protein OS=Bos taurus GN=TRM1L P...    30   9.1  
sp|Q03ZM0|RPOA_LEUMM DNA-directed RNA polymerase subunit alpha O...    30   9.1  

>sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=PRR7
           PE=2 SV=1
          Length = 274

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 19/65 (29%), Positives = 24/65 (36%)
 Frame = -2

Query: 376 RLRSPAHSHLHSHIRVHSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGGCCPW 197
           RL +PAH+H H H+ VH L H                  +  P   H+   P      PW
Sbjct: 83  RLEAPAHAHSHPHVHVHPLLHHGPAQPHAHAHPHPHHHALPHPPPTHLSVPPR-----PW 137

Query: 196 RRIRQ 182
              RQ
Sbjct: 138 SYPRQ 142


>sp|Q9EPX2|PPN_MOUSE Papilin OS=Mus musculus GN=Papln PE=2 SV=1
          Length = 1280

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = -2

Query: 328 HSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGG 209
           H   H+ RP+ R S       +  RW      PC  SCGG
Sbjct: 342 HMCQHQPRPTHRRSCNTQPCPKTKRWKVGPWTPCSVSCGG 381


>sp|A5D7S3|TRM1L_BOVIN TRM1-like protein OS=Bos taurus GN=TRM1L PE=2
           SV=1
          Length = 737

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 316 HRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRP 221
           HR+  +  W   V+  G RM   C  H+PCRP
Sbjct: 144 HRHLQNLHWKVSVEFEGYRM---CICHLPCRP 172


>sp|Q03ZM0|RPOA_LEUMM DNA-directed RNA polymerase subunit alpha
           OS=Leuconostoc mesenteroides subsp. mesenteroides
           (strain ATCC 8293 / NCDO 523) GN=rpoA PE=3 SV=1
          Length = 314

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 124 LFMELSPVAEQKTVSTRKQAAGSSSKDSTP 213
           LFM++SPVA + +V    +   +S+ DS P
Sbjct: 223 LFMDISPVAAEASVMVEAEPVAASASDSAP 252
tr_hit_id Q3U9R3
Definition tr|Q3U9R3|Q3U9R3_MOUSE Putative uncharacterized protein OS=Mus musculus
Align length 58
Score (bit) 38.1
E-value 0.27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958773|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_O07, 5'
         (524 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3U9R3|Q3U9R3_MOUSE Putative uncharacterized protein OS=Mus m...    38   0.27 
tr|Q3U5K6|Q3U5K6_MOUSE Putative uncharacterized protein OS=Mus m...    38   0.27 
tr|Q2KFP6|Q2KFP6_MAGGR Putative uncharacterized protein OS=Magna...    38   0.27 
tr|A6BL21|A6BL21_9CYAN Putative uncharacterized protein OS=Lepto...    35   1.7  
tr|Q6ESE4|Q6ESE4_ORYSJ Putative uncharacterized protein P0605D08...    35   1.7  
tr|Q0E0P6|Q0E0P6_ORYSJ Os02g0533000 protein OS=Oryza sativa subs...    35   1.7  
tr|Q8T8P0|Q8T8P0_STRPU Testis potassium dependent sodium/calcium...    34   5.1  
tr|B4LTK1|B4LTK1_DROVI GJ19787 OS=Drosophila virilis GN=GJ19787 ...    34   5.1  
tr|Q5GYP9|Q5GYP9_XANOR Regucalcin OS=Xanthomonas oryzae pv. oryz...    33   8.6  
tr|Q1IQ28|Q1IQ28_ACIBL Tetratricopeptide repeat protein OS=Acido...    33   8.6  
tr|Q8H5M9|Q8H5M9_ORYSJ Putative uncharacterized protein OJ1047_A...    33   8.6  
tr|B6KGQ5|B6KGQ5_TOXGO Zinc finger (CCCH type) protein, putative...    33   8.6  
tr|B4KFK0|B4KFK0_DROMO GI18041 OS=Drosophila mojavensis GN=GI180...    33   8.6  
tr|B8P299|B8P299_9APHY Predicted protein OS=Postia placenta Mad-...    33   8.6  

>tr|Q3U9R3|Q3U9R3_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=I830134H01Rik PE=2 SV=1
          Length = 150

 Score = 38.1 bits (87), Expect = 0.27
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 370 RSPAHSHLHSHIRVHSLHHRNRPSK---RWSKRVDSRGRRMRWPCTRHIPCRPSCGGC 206
           RSP H+H H+H   H+  H + P       + R   +GR +    T  +    SCG C
Sbjct: 91  RSPTHTHTHTHTHTHTHTHTHTPGAGEGSLNSRAQRKGREVHCSSTSALQNLGSCGSC 148


>tr|Q3U5K6|Q3U5K6_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=I830134H01Rik PE=2 SV=1
          Length = 150

 Score = 38.1 bits (87), Expect = 0.27
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 370 RSPAHSHLHSHIRVHSLHHRNRPSK---RWSKRVDSRGRRMRWPCTRHIPCRPSCGGC 206
           RSP H+H H+H   H+  H + P       + R   +GR +    T  +    SCG C
Sbjct: 91  RSPTHTHTHTHTHTHTHTHTHTPGAGEGSLNSRAQRKGREVHCSSTSALQNLGSCGSC 148


>tr|Q2KFP6|Q2KFP6_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea 70-15 GN=MGCH7_ch7g639 PE=4 SV=1
          Length = 1139

 Score = 38.1 bits (87), Expect = 0.27
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -2

Query: 358 HSHLHSHIRVHSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGGCCPWRRIRQL 179
           HSH+H+H+ V S    + P +  S+    R +R R  C +    R  C G CP RR    
Sbjct: 15  HSHVHTHMAVDSPQPDDVPDEDLSEHARPR-KRTRRACDKCSNSRTRCNGECPCRRCVDY 73

Query: 178 ACGCS-QFSARQRAKAP 131
              C      ++R +AP
Sbjct: 74  GYTCRYNREVKKRGRAP 90


>tr|A6BL21|A6BL21_9CYAN Putative uncharacterized protein
           OS=Leptolyngbya valderiana BDU 20041 GN=LVAL_00016 PE=4
           SV=1
          Length = 111

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
 Frame = -2

Query: 373 LRSPAHSHLHSHIRVHSLHHRN-----RPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGG 209
           L  PAH+H H H    S   +      RP +RW  R++   R       R IPC      
Sbjct: 4   LTHPAHTHPHPHPVAVSPRRQTGFDIFRPLRRWIDRIEVTHRLFAHLVCRVIPC------ 57

Query: 208 CCPWRR 191
           CCP+ R
Sbjct: 58  CCPFER 63


>tr|Q6ESE4|Q6ESE4_ORYSJ Putative uncharacterized protein P0605D08.33
           OS=Oryza sativa subsp. japonica GN=P0605D08.33 PE=4 SV=1
          Length = 528

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 367 SPAHSHLHSHIRV---HSLHHRNRPSKRWSKRVDSRGRRMRWP 248
           SP H HLH H+RV   H   H + PS RW   V +R   ++ P
Sbjct: 35  SPYHHHLHLHLRVAHHHHGRHPHPPSPRWRHDVRARAGTIQAP 77


>tr|Q0E0P6|Q0E0P6_ORYSJ Os02g0533000 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0533000 PE=4 SV=1
          Length = 527

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 367 SPAHSHLHSHIRV---HSLHHRNRPSKRWSKRVDSRGRRMRWP 248
           SP H HLH H+RV   H   H + PS RW   V +R   ++ P
Sbjct: 35  SPYHHHLHLHLRVAHHHHGRHPHPPSPRWRHDVRARAGTIQAP 77


>tr|Q8T8P0|Q8T8P0_STRPU Testis potassium dependent sodium/calcium
           exchanger OS=Strongylocentrotus purpuratus PE=2 SV=1
          Length = 652

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
 Frame = -2

Query: 373 LRSPAHSHLH--SHIRVHSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGGCCP 200
           L  P H H H   H   H  H +    +   K+ +        P  R +PC P+     P
Sbjct: 375 LNHPHHHHHHHDEHDGDHKPHAQGEKEEEEDKKSEDSEEE---PTLRPLPCLPAINMYYP 431

Query: 199 WRRIRQLACGCSQFSAR 149
            + I +  CGC ++S +
Sbjct: 432 DKEILESTCGCLRYSLK 448


>tr|B4LTK1|B4LTK1_DROVI GJ19787 OS=Drosophila virilis GN=GJ19787
           PE=4 SV=1
          Length = 811

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = -2

Query: 373 LRSPAHSHLHSHIRVHSLHHRNRPSKRWSKRV-----DSRGRRMRWPCTRHIPCRPSCGG 209
           L S AH H +SH  +H  H R R SK   KR+     DS   R+   C   +    S G 
Sbjct: 741 LHSHAHGHAYSHQHLHGRHQRQR-SKSRDKRLHDECFDSDVHRLHHGCKDQLLANNSGGS 799

Query: 208 C 206
           C
Sbjct: 800 C 800


>tr|Q5GYP9|Q5GYP9_XANOR Regucalcin OS=Xanthomonas oryzae pv. oryzae
           GN=XOO2918 PE=4 SV=1
          Length = 697

 Score = 33.1 bits (74), Expect = 8.6
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -2

Query: 319 HHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGGCCPWRRIRQLACGCSQFSAR--- 149
           HHR R  +R     D R  R R      +P RP   GC P R +R   CG +    R   
Sbjct: 278 HHRMRQDRR-----DRRSLRCRLRAA--LPARPDRAGCMPARGLRLAQCGAAGTEHRHSL 330

Query: 148 QRAKAP 131
           QR + P
Sbjct: 331 QRRRRP 336


>tr|Q1IQ28|Q1IQ28_ACIBL Tetratricopeptide repeat protein
           OS=Acidobacteria bacterium (strain Ellin345)
           GN=Acid345_2021 PE=3 SV=1
          Length = 426

 Score = 33.1 bits (74), Expect = 8.6
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
 Frame = +1

Query: 82  ASTVK-TSHSFDSY-----DLFMELSPVAEQKTVSTRKQAAGSSSKDSTPHMKVGKEYAL 243
           A+T+K TSH  + Y      L   LS  + Q+     +QAA   SKD  PH+   + Y +
Sbjct: 120 ATTLKPTSHPEEGYFRAWLSLGHVLSKESPQRAAEAYQQAAKFKSKDPEPHLSAAQMYEI 179

Query: 244 CKATSSS 264
            K T+ +
Sbjct: 180 AKDTAGA 186