DK958786 [AcEST]

DK958786
Clone id	TST39A01NGRL0002_O21
Library	TST39
Length	673
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_O21. 5' end sequence.
Accession	DK958786
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL2348Contig1
Sequence	CTCTGCAAAACCCTACAACTCTACCATGGCGAGCAGGAAAACATGCGCGATTACCAAGGC TCTTCTGCGTGTGCGCCTCTCTGAAGGCAGTGCAACTCCAGCAAGCGCAATTTGTAAGCT ACCGACAAGGCCTCAAAGAAGTTCTGCGCTCGGTTCCGCGTGCAGGCCTCTAAATGCAAT GAGGTGCATGCAAGGAGTTAGATTCTATGCAAGATTGAGAGACGCTCCGTCAAGGCAGCC GCTACAATCTGCTCCGGTACCCTCTGTAAGCCATGATGATGAGGATGACGATGACAATGA CGACGACGACGACGACGACGATCACGATGATGATGATGTTGAGGAGAAGGATGATGATGC TGATAAAGGAAAAGAGCAGAAGAAGGTGGCGGCGGCGGAGGAGGAGGAGGAGGATAATCA TACCTTCCTCTTTGGCAAATATGATAATAATTATAGTGATGATGATACAGAGGATTTTTA CATGCCTGACTTTACTTCCTCGGACTACGATGACGACTAGCTGGTTTGCATCAGGATTTA CAACAAGTCGACTCTCCACACGACAAGAAAATTTTGTTCAAGTGCTCGTTGTAGGCAAGA CGCAGTTGTATTTCATGCACTCTCCATGACAGACTAAGGGTTCTTGCTCCGCTCGCTTTA ATTGCTCTCACTC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK958786\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_O21, 5' (673 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B1G0L4
Definition	tr\|B1G0L4\|B1G0L4_9BURK Major facilitator superfamily MFS_1 OS=Burkholderia graminis C4D1M
Align length	54
Score (bit)	34.7
E-value	5.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK958786\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_O21, 5' (673 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B1G0L4\|B1G0L4_9BURK Major facilitator superfamily MFS_1 OS=Bu... 35 5.6 tr\|A2DDX6\|A2DDX6_TRIVA Putative uncharacterized protein OS=Trich... 35 5.6 >tr\|B1G0L4\|B1G0L4_9BURK Major facilitator superfamily MFS_1 OS=Burkholderia graminis C4D1M GN=BgramDRAFT_2901 PE=4 SV=1 Length = 428 Score = 34.7 bits (78), Expect = 5.6 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Frame = -2 Query: 177 AFRGLHAEPSAELL*GLVGSLQIALAG--VALPSERRTRRRALVIAHVFLLAMV 22 A R LH ++ ++ G+V SL + +A + ++R TR+R LVI+ V +L +V Sbjct: 265 AVRALHLSSTSAVISGIVSSLALFVAAPLAGMLADRYTRKRVLVISRVVMLLLV 318 >tr\|A2DDX6\|A2DDX6_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_199410 PE=4 SV=1 Length = 332 Score = 34.7 bits (78), Expect = 5.6 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 425 FLFGKYDNNYSDDDTEDFYMPDFTSSDYDDD 517 F F ++D N DDD ++ Y PD S+D +DD Sbjct: 5 FAFWQFDINEDDDDDDEAYQPDDNSNDDEDD 35