DK958792
Clone id TST39A01NGRL0002_P03
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_P03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTCGATGACTGTCCCCACGACCGATCTTCGTCTTCCTCTACGGCAGAGAGCTTGAACGGA
CAGCATGGGGCGACCGCCGTCAGGAGAAATGCCCGTCTTTCGATTTCTGCCGAACGAGGT
GAACAAACTACTGAGCCTTTGGGAGGATTGCAAAATTAGTGGTCCGCCTAATGTAGAGTT
CTGCAGGATCTAGTTGAGAAGTTCAGCAAAGCCAGAGAGCAAGATGGGAAAGGCATGTGT
GAATCGTAGGCAGAGTGCTCCAGTGGTTTCAAAACAGACGGCGGTATGTATCGTAAACAG
GCAAAGAAACAATTGAGAAGGCTATCTGATAACGAGTCCTTTTCAGAGAGGACGCAAACT
ACCATCAGTCCTCTCTCAGATGATTTATGATGTACGCTACCCCCACCACTCCTCCCTCAT
ATGAGATAGACATGACTACAGTAGAGTTTGAAGCATAGTCTATCTAAAGATGGTGCTTGC
TATGATGTGCGCAACATTCTTAGAGCACTGAATGCTCGACTCTGGA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958792|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_P03, 5'
(526 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B7ZYP9
Definition tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 63
Score (bit) 36.2
E-value 0.73
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958792|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_P03, 5'
(526 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea m... 36 0.73
tr|A7P1V0|A7P1V0_VITVI Chromosome chr19 scaffold_4, whole genome... 35 1.0
tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea... 36 1.4

>tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 380

Score = 36.2 bits (82), Expect(2) = 0.73
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2

Query: 65 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNVEFCRI*LRSSAKPESKMGKACVN 244
MGRPPS P FRFLP+EV ++ + P + + SA PE + GK +
Sbjct: 1 MGRPPSAGAPAFRFLPSEVAEMEARLLQLNNGIPTRAVLQTLADKFSASPE-RAGKVAIQ 59

Query: 245 RRQ 253
+Q
Sbjct: 60 PKQ 62



Score = 20.4 bits (41), Expect(2) = 0.73
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3

Query: 252 RVLQWFQNRR 281
+V WFQNRR
Sbjct: 62 QVWNWFQNRR 71


>tr|A7P1V0|A7P1V0_VITVI Chromosome chr19 scaffold_4, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027762001
PE=3 SV=1
Length = 162

Score = 35.0 bits (79), Expect(2) = 1.0
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2

Query: 65 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGP 166
MGRPPS P FRF PNEV ++ ++ ++ S P
Sbjct: 1 MGRPPSNGGPAFRFTPNEVAEMENILQEHNNSMP 34



Score = 21.2 bits (43), Expect(2) = 1.0
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3

Query: 246 VGRVLQWFQNRR 281
V +V WFQNRR
Sbjct: 60 VKQVWNWFQNRR 71


>tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 373

Score = 35.8 bits (81), Expect = 1.4
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +2

Query: 65 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNVEFCRI*LRSSAKPESKMGKACVN 244
MGRPP PVFRF EV ++ + ED K + P + + SA PE + GK V
Sbjct: 1 MGRPPLSGAPVFRFSSKEVQEMEKVLEDTKGAIPNRDMIRSLAEKFSASPE-RDGKILVQ 59

Query: 245 RRQ 253
+Q
Sbjct: 60 IKQ 62