DK958816 |
Clone id |
TST39A01NGRL0003_A04 |
Library |
TST39 |
Length |
594 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_A04. 5' end sequence. |
Accession |
DK958816 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL306Contig1 |
Sequence |
CTTCGCGGTTCCCTCTCTCACTTTTATTATCACATCTGTGAGGCTCTCTTTCCATTCGAA GACTGGTGGGGAGTGCCTATCGCAGTTGCATTTGATCAGACTATCTGGTCAGCGATATGG AAGAGCATCTACTTTGTTACACTGGGTGTGCTCCGATTGGAGTCACCCACTACCATAGCT TCAGAGTTGACGTCAACATTCAGGCCTATGCTCACGGCTGGATGGAAATTGTGGCCTTTT GCTCACCTCACCACATATAGAGTCATACCACTGGAGCAGAGACTGTTGTGGGTGGACTGT GTAGAACTTATCTGGGTCACTATCCTTTCCATGTATTCGAATGAGAGAGCTGAAACTCGG ATGCAGGAAGAGAATTCGCATAGTTTGGATGAACGATCTACATCTTAAAGGCAGAATAGA ATCTCTGAATGGATGTTGCTAGGTCGAGCCTCACCTGGCATCTGCCACAATTTGCCAAAT TAGAAAAGAAAGTTGCGTTCAGTTGATGGTAGAGCTCTCTTTGTAATGTACTTCTGTAAC TGTAAGAATATGGAATCACCATTTTTTCTCAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6CAW5 |
Definition |
sp|Q6CAW5|SYM1_YARLI Protein SYM1 OS=Yarrowia lipolytica |
Align length |
90 |
Score (bit) |
57.4 |
E-value |
5.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6U032 |
Definition |
tr|B6U032|B6U032_MAIZE Mpv17 / PMP22 family protein OS=Zea mays |
Align length |
126 |
Score (bit) |
218.0 |
E-value |
2.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958816|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_A04, 5' (570 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6U032|B6U032_MAIZE Mpv17 / PMP22 family protein OS=Zea mays ... 218 2e-55 tr|B4FIN2|B4FIN2_MAIZE Putative uncharacterized protein OS=Zea m... 218 2e-55 tr|Q75IB3|Q75IB3_ORYSJ Os03g0583800 protein OS=Oryza sativa subs... 214 3e-54 tr|B8AL69|B8AL69_ORYSI Putative uncharacterized protein OS=Oryza... 214 3e-54 tr|A9PIQ8|A9PIQ8_POPJC Putative uncharacterized protein OS=Popul... 206 7e-52 tr|Q9C933|Q9C933_ARATH Putative uncharacterized protein F14G24.1... 205 1e-51 tr|Q7Y1Z9|Q7Y1Z9_ARATH Putative uncharacterized protein At4g0341... 204 4e-51 tr|Q5XEV3|Q5XEV3_ARATH At4g03410 OS=Arabidopsis thaliana PE=2 SV=1 204 4e-51 tr|A7P1H6|A7P1H6_VITVI Chromosome chr19 scaffold_4, whole genome... 201 3e-50 tr|B8LNA6|B8LNA6_PICSI Putative uncharacterized protein OS=Picea... 200 4e-50 tr|A9T601|A9T601_PHYPA Predicted protein OS=Physcomitrella paten... 200 4e-50 tr|A9SHF9|A9SHF9_PHYPA Predicted protein (Fragment) OS=Physcomit... 199 1e-49 tr|A7PXD7|A7PXD7_VITVI Chromosome chr12 scaffold_36, whole genom... 199 1e-49 tr|Q6F2X3|Q6F2X3_ORYSJ Putative peroxisomal membrane protein, 5'... 187 3e-46 tr|A6N0Y9|A6N0Y9_ORYSI Mpv17/pmp22 family protein (Fragment) OS=... 179 7e-44 tr|Q69LX3|Q69LX3_ORYSJ Peroxisomal membrane protein-like OS=Oryz... 164 3e-39 tr|Q10HL4|Q10HL4_ORYSJ Peroxisomal membrane protein, putative, e... 123 8e-27 tr|Q0J2Q8|Q0J2Q8_ORYSJ Os09g0315000 protein OS=Oryza sativa subs... 123 8e-27 tr|Q8LF31|Q8LF31_ARATH Putative uncharacterized protein OS=Arabi... 119 2e-25 tr|B7G9T7|B7G9T7_PHATR Predicted protein (Fragment) OS=Phaeodact... 115 1e-24 tr|B7S4J2|B7S4J2_PHATR Predicted protein (Fragment) OS=Phaeodact... 115 2e-24 tr|B8CE52|B8CE52_THAPS Predicted protein (Fragment) OS=Thalassio... 112 2e-23 tr|Q10HL5|Q10HL5_ORYSJ Peroxisomal membrane protein, putative, e... 109 9e-23 tr|A3AJX4|A3AJX4_ORYSJ Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|A3AJY0|A3AJY0_ORYSJ Putative uncharacterized protein OS=Oryza... 98 3e-19 tr|B7FJI8|B7FJI8_MEDTR Putative uncharacterized protein (Fragmen... 88 4e-16 tr|Q9ZNU0|Q9ZNU0_ARATH Putative uncharacterized protein AT4g0341... 79 2e-13 tr|B7FPU8|B7FPU8_PHATR Predicted protein (Fragment) OS=Phaeodact... 78 3e-13 tr|B8BTZ1|B8BTZ1_THAPS Predicted protein (Fragment) OS=Thalassio... 76 2e-12 tr|B8C443|B8C443_THAPS Predicted protein (Fragment) OS=Thalassio... 69 2e-10
>tr|B6U032|B6U032_MAIZE Mpv17 / PMP22 family protein OS=Zea mays PE=2 SV=1 Length = 353
Score = 218 bits (555), Expect = 2e-55 Identities = 99/126 (78%), Positives = 108/126 (85%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSH+YYHICEALFPF+DWW VP VAFDQT+WSAIW SIYFV LG LRLESPTTI Sbjct: 218 LHGSLSHYYYHICEALFPFKDWWVVPAKVAFDQTVWSAIWNSIYFVVLGFLRLESPTTIY 277
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 SEL STF PMLTAGWKLWPFAHL TY V+P+EQRLLWVDCVEL+WVTILS YSNE++E R Sbjct: 278 SELKSTFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELVWVTILSTYSNEKSEAR 337
Query: 361 MQEENS 378 + S Sbjct: 338 NSDSTS 343
>tr|B4FIN2|B4FIN2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 351
Score = 218 bits (554), Expect = 2e-55 Identities = 99/126 (78%), Positives = 108/126 (85%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSH+YYHICEALFPF+DWW VP VAFDQTIWSAIW SIYFV LG LRLESPTTI Sbjct: 216 LHGSLSHYYYHICEALFPFKDWWVVPAKVAFDQTIWSAIWNSIYFVVLGFLRLESPTTIY 275
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 +EL STF PMLTAGWKLWPFAHL TY V+P+EQRLLWVDCVEL+WVTILS YSNE++E R Sbjct: 276 NELKSTFWPMLTAGWKLWPFAHLVTYGVVPVEQRLLWVDCVELVWVTILSTYSNEKSEAR 335
Query: 361 MQEENS 378 + S Sbjct: 336 NSDSTS 341
>tr|Q75IB3|Q75IB3_ORYSJ Os03g0583800 protein OS=Oryza sativa subsp. japonica GN=OJ1785_A05.29 PE=2 SV=1 Length = 358
Score = 214 bits (545), Expect = 3e-54 Identities = 98/128 (76%), Positives = 107/128 (83%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSH+YYH CEALFPF+DWW VP V FDQT WSAIW SIYFV LG LRLESP TI+ Sbjct: 223 LHGSLSHYYYHFCEALFPFKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESPATIS 282
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 SEL STF PMLTAGWKLWPFAHL TY ++P+EQRLLWVDCVELIWVTILS YSNE++E R Sbjct: 283 SELKSTFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 342
Query: 361 MQEENSHS 384 E+ S S Sbjct: 343 NSEDASTS 350
>tr|B8AL69|B8AL69_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12389 PE=4 SV=1 Length = 369
Score = 214 bits (545), Expect = 3e-54 Identities = 98/128 (76%), Positives = 107/128 (83%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSH+YYH CEALFPF+DWW VP V FDQT WSAIW SIYFV LG LRLESP TI+ Sbjct: 220 LHGSLSHYYYHFCEALFPFKDWWVVPAKVVFDQTAWSAIWNSIYFVVLGFLRLESPATIS 279
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 SEL STF PMLTAGWKLWPFAHL TY ++P+EQRLLWVDCVELIWVTILS YSNE++E R Sbjct: 280 SELKSTFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 339
Query: 361 MQEENSHS 384 E+ S S Sbjct: 340 NSEDASTS 347
>tr|A9PIQ8|A9PIQ8_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 369
Score = 206 bits (524), Expect = 7e-52 Identities = 93/123 (75%), Positives = 103/123 (83%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSH+YY CE LFPF+DWW VP VAFDQT+W+A W SIYF LG LRLESP +I Sbjct: 231 LHGSLSHYYYQFCEELFPFQDWWVVPAKVAFDQTLWAAAWNSIYFTALGFLRLESPASIF 290
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 SELT+TF PMLTAGWKLWPFAHL TY VIP+EQRLLWVDCVELIWVTILS YSNE++E R Sbjct: 291 SELTATFWPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 350
Query: 361 MQE 369 + E Sbjct: 351 ISE 353
>tr|Q9C933|Q9C933_ARATH Putative uncharacterized protein F14G24.14 (At1g52870/F14G24_14) OS=Arabidopsis thaliana GN=At1g52870 PE=2 SV=1 Length = 366
Score = 205 bits (522), Expect = 1e-51 Identities = 91/123 (73%), Positives = 102/123 (82%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSHFYY CE LFPF+DWW VP+ VAFDQT+WSAIW SIYF LG LR ESP +I Sbjct: 226 LHGSLSHFYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIF 285
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 EL +TF PMLTAGWKLWPFAHL TY ++P+EQRLLWVDCVELIWVTILS YSNE++E R Sbjct: 286 KELKATFLPMLTAGWKLWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 345
Query: 361 MQE 369 + E Sbjct: 346 ISE 348
>tr|Q7Y1Z9|Q7Y1Z9_ARATH Putative uncharacterized protein At4g03410 OS=Arabidopsis thaliana GN=At4g03410 PE=2 SV=1 Length = 317
Score = 204 bits (518), Expect = 4e-51 Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 3/134 (2%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSH+YY CEALFPF++WW VP VAFDQT+WSAIW SIYF LG+LR +SP I Sbjct: 184 LHGSLSHYYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIF 243
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 SE+ +TF PMLTAGWKLWP AHL TY VIP++QRLLWVDC+ELIWVTILS YSNE+AE + Sbjct: 244 SEIKTTFLPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQ 303
Query: 361 MQEE---NSHSLDE 393 EE +SHS ++ Sbjct: 304 ASEETNSSSHSSED 317
>tr|Q5XEV3|Q5XEV3_ARATH At4g03410 OS=Arabidopsis thaliana PE=2 SV=1 Length = 317
Score = 204 bits (518), Expect = 4e-51 Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 3/134 (2%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSH+YY CEALFPF++WW VP VAFDQT+WSAIW SIYF LG+LR +SP I Sbjct: 184 LHGSLSHYYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIF 243
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 SE+ +TF PMLTAGWKLWP AHL TY VIP++QRLLWVDC+ELIWVTILS YSNE+AE + Sbjct: 244 SEIKTTFLPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQ 303
Query: 361 MQEE---NSHSLDE 393 EE +SHS ++ Sbjct: 304 ASEETNSSSHSSED 317
>tr|A7P1H6|A7P1H6_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027620001 PE=4 SV=1 Length = 291
Score = 201 bits (510), Expect = 3e-50 Identities = 87/128 (67%), Positives = 104/128 (81%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSH+YY CEALFPF+DWW VP VAFDQT+W+A+W SIY+ +G LR +SP + Sbjct: 145 LHGSLSHYYYQFCEALFPFQDWWVVPAKVAFDQTLWAAVWNSIYYTVVGFLRFDSPANVF 204
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 EL +TF PMLTAGWKLWPFAHL TY VIP+EQRLLWVDCVELIWVTILS YSNE++E R Sbjct: 205 GELRATFWPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 264
Query: 361 MQEENSHS 384 + E ++ + Sbjct: 265 VSEASAEA 272
>tr|B8LNA6|B8LNA6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 294
Score = 200 bits (509), Expect = 4e-50 Identities = 89/123 (72%), Positives = 101/123 (82%) Frame = +1
Query: 1 LRGSLSHFYYHICEALFPFEDWWGVPIAVAFDQTIWSAIWKSIYFVTLGVLRLESPTTIA 180 L GSLSH+YY +CEALFPF+ WW VP VAFDQTIW+A+W SIYF LG+LR ESP I Sbjct: 152 LHGSLSHYYYQLCEALFPFQGWWVVPAKVAFDQTIWAAVWNSIYFTVLGLLRFESPANIF 211
Query: 181 SELTSTFRPMLTAGWKLWPFAHLTTYRVIPLEQRLLWVDCVELIWVTILSMYSNERAETR 360 EL +TF P+LTAGWKLWPFAHL TY V+P+EQRLLWVDCVELIWVTILS YSNE++E R Sbjct: 212 GELKATFWPLLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 271
Query: 361 MQE 369 E Sbjct: 272 SLE 274
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