DK958818 |
Clone id |
TST39A01NGRL0003_A06 |
Library |
TST39 |
Length |
715 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_A06. 5' end sequence. |
Accession |
DK958818 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL309Contig1 |
Sequence |
CGAAAATGGTAAGCTCGTGGGTGGATGTATTGGGTGGGTACGTCACGACTCCCCATTGTT GATAGGGTGTGAGGTTTCCCTTCTATTTCCTGCATTTTGCAGCCTTTCCGGCGGTATGTA GAGATTGGGCGCGTAGCCATGGTAAATTATGGCCCCAGCTATGGCAAGCTCGTCGTCATT GTGGACGTTGTGGATCAGAACCGGGCATTAGTAGATGCACCTGATATGGTTCGTGGTGCC ATGAATTTCAAGCGGTTGTCTTTAACTGACATCAAGATTGATATACCAAGGATGCCAAAG AAAAAACAACTTACAGATGCTATTAATTCTGCAGATGTGCATGGCAAATGGGCTAACAGC TCTTGGGGGAGGAAACTAATTGTGCAAAAGAAGCGTGCTTCATTGAATGATTTTGACCGA TTTAAAGTCATGGTGGCAAGGATCAAGAGGAGCTCTATTGTCAAGCGAGAGCTGGCAAAA TTGCGCAAGGGGAAAGCTTAGGCGGATTCCATGCAATTTTCAAGCGCAAGCTGGCAAAGC TACACAAAGTTAGCTTTATGTCATCTATGCAGGACAAACTTTGCTATTTGCCTTTGCAAC GGGAGATGTTATGAAATACGAGTGGAAATTTGTGATGGAAATTTTTGCTAAACAAGAATG AGTCTCCTTGAAGGTTGGACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9T043 |
Definition |
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana |
Align length |
128 |
Score (bit) |
193.0 |
E-value |
6.0e-49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958818|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_A06, 5' (682 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis... 193 6e-49 sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum s... 193 8e-49 sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis... 191 2e-48 sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RP... 129 1e-29 sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=... 129 2e-29 sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens G... 128 3e-29 sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus G... 127 4e-29 sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicu... 126 1e-28 sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia ja... 121 4e-27 sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rube... 120 5e-27 sp|O94238|RL14_SCHPO 60S ribosomal protein L14 OS=Schizosaccharo... 101 4e-21 sp|P38754|RL14B_YEAST 60S ribosomal protein L14-B OS=Saccharomyc... 97 1e-19 sp|P36105|RL14A_YEAST 60S ribosomal protein L14-A OS=Saccharomyc... 96 1e-19 sp|P55841|RL14_DROME 60S ribosomal protein L14 OS=Drosophila mel... 91 6e-18 sp|Q54Z09|RL14_DICDI 60S ribosomal protein L14 OS=Dictyostelium ... 89 2e-17 sp|Q95ZE8|RL14_DROVI 60S ribosomal protein L14 OS=Drosophila vir... 88 4e-17 sp|Q25278|RL14_LEIDO Probable 60S ribosomal protein L14 OS=Leish... 62 4e-09 sp|P55843|RL14_TRYCO Probable 60S ribosomal protein L14 OS=Trypa... 60 8e-09 sp|P55842|RL14_TRYBB Probable 60S ribosomal protein L14 OS=Trypa... 60 1e-08 sp|P54054|RL14E_METJA 50S ribosomal protein L14e OS=Methanocaldo... 49 3e-05 sp|Q8TX43|RL14E_METKA 50S ribosomal protein L14e OS=Methanopyrus... 48 4e-05 sp|Q8U2L5|RL14E_PYRFU 50S ribosomal protein L14e OS=Pyrococcus f... 47 7e-05 sp|A1RTL6|RL14E_PYRIL 50S ribosomal protein L14e OS=Pyrobaculum ... 47 9e-05 sp|Q8ZYB4|RL14E_PYRAE 50S ribosomal protein L14e OS=Pyrobaculum ... 47 9e-05 sp|P59937|RL14E_PYRHO 50S ribosomal protein L14e OS=Pyrococcus h... 46 2e-04 sp|A4WH36|RL14E_PYRAR 50S ribosomal protein L14e OS=Pyrobaculum ... 46 2e-04 sp|Q9UZJ5|RL14E_PYRAB 50S ribosomal protein L14e OS=Pyrococcus a... 46 2e-04 sp|Q9YDD7|RL14E_AERPE 50S ribosomal protein L14e OS=Aeropyrum pe... 46 2e-04 sp|A8ABY5|RL14E_IGNH4 50S ribosomal protein L14e OS=Ignicoccus h... 45 5e-04 sp|Q975L7|RL14E_SULTO 50S ribosomal protein L14e OS=Sulfolobus t... 44 6e-04
>sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1 Length = 134
Score = 193 bits (491), Expect = 6e-49 Identities = 95/128 (74%), Positives = 112/128 (87%) Frame = +1
Query: 106 FRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDIKIDI 285 F+RYVEIGRVA+VNYG +GKLVVIVDVVDQNRALVDAPDM R MNFKRLSLTDI IDI Sbjct: 3 FKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDI 62
Query: 286 PRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVK 465 R+PKKK L +A+ ADV KW SSWGRKLIVQK+RA+LNDFDRFK+M+A+IK++ +V+ Sbjct: 63 NRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVR 122
Query: 466 RELAKLRK 489 +ELAKL+K Sbjct: 123 QELAKLKK 130
>sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1 Length = 133
Score = 193 bits (490), Expect = 8e-49 Identities = 93/132 (70%), Positives = 114/132 (86%) Frame = +1
Query: 103 PFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDIKID 282 PF+R+VEIGRVA++NYG YG+LVVIVDV+DQ RALVDAPDM R +NFKRLSLTD+KID Sbjct: 2 PFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKID 61
Query: 283 IPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIV 462 I R+PKKK L A+ +ADV KWA SSWGRKLIV+K RA+LNDFDRFK+M+A+IKR++ V Sbjct: 62 IKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAGV 121
Query: 463 KRELAKLRKGKA 498 ++ELAKL+K A Sbjct: 122 RQELAKLKKTAA 133
>sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1 Length = 134
Score = 191 bits (486), Expect = 2e-48 Identities = 95/128 (74%), Positives = 111/128 (86%) Frame = +1
Query: 106 FRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDIKIDI 285 F+R+VEIGRVA+VNYG YGKLVVIVDVVDQNRALVDAPDM R MN KRLSLTDI IDI Sbjct: 3 FKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDI 62
Query: 286 PRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVK 465 R+PKKK L +A+ ADV KW SSWGRKLIVQK+RA+LNDFDRFK+M+A+IKR+ IV+ Sbjct: 63 NRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVR 122
Query: 466 RELAKLRK 489 +ELAKL++ Sbjct: 123 QELAKLKR 130
>sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RPL14 PE=2 SV=1 Length = 213
Score = 129 bits (324), Expect = 1e-29 Identities = 64/130 (49%), Positives = 90/130 (69%), Gaps = 2/130 (1%) Frame = +1
Query: 106 FRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDIKI 279 FRR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD + Sbjct: 3 FRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFIL 62
Query: 280 DIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSI 459 P ++K + A AD++ KWA + W +K+ ++K+A + DFDR+KVM AR R+ + Sbjct: 63 KFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRL 122
Query: 460 VKRELAKLRK 489 +K E+ KL+K Sbjct: 123 IKLEVKKLQK 132
>sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=RPL14 PE=2 SV=3 Length = 214
Score = 129 bits (323), Expect = 2e-29 Identities = 64/130 (49%), Positives = 90/130 (69%), Gaps = 2/130 (1%) Frame = +1
Query: 106 FRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDIKI 279 FRR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD + Sbjct: 3 FRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFIL 62
Query: 280 DIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSI 459 P ++K + A AD++ KWA + W +K+ ++K+A + DFDR+KVM AR R+ + Sbjct: 63 KFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRL 122
Query: 460 VKRELAKLRK 489 +K E+ KL+K Sbjct: 123 IKIEVKKLQK 132
>sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4 Length = 215
Score = 128 bits (321), Expect = 3e-29 Identities = 64/130 (49%), Positives = 89/130 (68%), Gaps = 2/130 (1%) Frame = +1
Query: 106 FRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDIKI 279 FRR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD + Sbjct: 3 FRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFIL 62
Query: 280 DIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSI 459 P +K + A AD++ KWA + W +K+ ++++A + DFDRFKVM A+ R+ I Sbjct: 63 KFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRI 122
Query: 460 VKRELAKLRK 489 +K E+ KL+K Sbjct: 123 IKNEVKKLQK 132
>sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus GN=Rpl14 PE=2 SV=3 Length = 217
Score = 127 bits (320), Expect = 4e-29 Identities = 63/130 (48%), Positives = 90/130 (69%), Gaps = 2/130 (1%) Frame = +1
Query: 106 FRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDIKI 279 FRRYVE+GRVA +++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD + Sbjct: 3 FRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFIL 62
Query: 280 DIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSI 459 P ++K + A AD++ KWA + W +K+ ++++A + DFDRFKVM A+ R+ I Sbjct: 63 KFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRI 122
Query: 460 VKRELAKLRK 489 +K E+ KL++ Sbjct: 123 IKTEVKKLQR 132
>sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3 Length = 214
Score = 126 bits (316), Expect = 1e-28 Identities = 62/130 (47%), Positives = 90/130 (69%), Gaps = 2/130 (1%) Frame = +1
Query: 106 FRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDIKI 279 FRR+VE+GRVA +++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD + Sbjct: 3 FRRFVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFIL 62
Query: 280 DIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSI 459 P ++K + A AD++ KWA + W +K+ ++++A + DFDRFKVM A+ R+ I Sbjct: 63 KFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRI 122
Query: 460 VKRELAKLRK 489 +K E+ KL++ Sbjct: 123 IKTEVKKLQR 132
>sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1 Length = 133
Score = 121 bits (303), Expect = 4e-27 Identities = 66/130 (50%), Positives = 90/130 (69%), Gaps = 3/130 (2%) Frame = +1
Query: 106 FRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPD--MVRGAMNFKRLSLTDIKI 279 F R+VE GRVA+V+YG KLVVIVD++DQNR LVD+P + R +N KR++LT IK+ Sbjct: 3 FTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSIKV 62
Query: 280 D-IPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSS 456 D I R ++ +A V +A S WG+KL ++KRA+L+DF RFKVMVAR+K+S Sbjct: 63 DDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKKSK 122
Query: 457 IVKRELAKLR 486 + ELAKL+ Sbjct: 123 AINAELAKLK 132
>sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1 Length = 152
Score = 120 bits (302), Expect = 5e-27 Identities = 63/130 (48%), Positives = 83/130 (63%), Gaps = 2/130 (1%) Frame = +1
Query: 106 FRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDIKI 279 FRR+VEIGRVA YGP GKLV IVDV+DQNRALVD P + R +MNFK L LT++K Sbjct: 3 FRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNLKA 62
Query: 280 DIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSI 459 P K + A ++ KW S +K+ ++KR +L DF+RFK+M A+ R+ + Sbjct: 63 KFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRL 122
Query: 460 VKRELAKLRK 489 +K E KLRK Sbjct: 123 IKIEFGKLRK 132
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRN0 |
Definition |
tr|B8LRN0|B8LRN0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
129 |
Score (bit) |
211.0 |
E-value |
5.0e-53 |
Report |
|