BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958826|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_A15, 5'
         (665 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase...    33   1.8  
sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18 OS=Schizosa...    32   3.9  
sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp....    30   8.8  

>sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase
           component HRD3 OS=Saccharomyces cerevisiae GN=HRD3 PE=1
           SV=1
          Length = 833

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +1

Query: 442 TISPHLSVKRRLVYQRLFALQLGNSWLKSPMPRKWHVGFN--KQF-KNLFFYSDL 597
           T+ P  S K  L YQR  A QLGN   K  +  K++ GFN  + F K+L  Y D+
Sbjct: 165 TVIPQDSAKALLYYQR--AAQLGNLKAKQVLAYKYYSGFNVPRNFHKSLVLYRDI 217


>sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18
           OS=Schizosaccharomyces pombe GN=SPBC119.18 PE=2 SV=1
          Length = 69

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 526 SPMPRKWHVGFNKQFKNLFFYSDLHNREC 612
           +P  +K+   FN  + N F   DLHNR+C
Sbjct: 10  TPAKKKYDACFNDWYANKFLKGDLHNRDC 38


>sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1
          Length = 394

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 176 GPHEISSSFHELSGVGGFAKLASPSDRDYLGLRAGFLPSRDKPVSTHNL 322
           G    +S F + +G+GGFA L      ++ G   G+  SR  PV   +L
Sbjct: 74  GAAAAASGFQDFAGIGGFADLFESFFTNFAGGGVGYSRSRQGPVRGDDL 122

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958826|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_A15, 5'
         (665 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein OS=Crypt...    37   1.4  

>tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein
            OS=Cryptosporidium muris RN66 GN=CMU_027500 PE=4 SV=1
          Length = 1841

 Score = 36.6 bits (83), Expect = 1.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 511  NSWLKSPMPRKWHVGFNKQFKNLFFYSDLHNREC 612
            N WL  P  + W VG+NK   N ++ S++ N +C
Sbjct: 1626 NGWLTHPCIKSWDVGYNKSLGNKYYNSEILNFDC 1659