DK958827 |
Clone id |
TST39A01NGRL0003_A16 |
Library |
TST39 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_A16. 5' end sequence. |
Accession |
DK958827 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL77Contig1 |
Sequence |
CGCTTCGTCCCCAGCTTCTTTCGAGCTCCACCGGCGCCATGGTGAAATACTCCAGGGAGC CTGATAATATCACAAAAGCTTGTAAGTCTAGAGGTTCTGACCGCCGTGCGCTCTTTAAGA ACGCCCGCGAGGCAGCACAAGCGATCAAGAAACTTGACCTTGCAAAGGCCAAAAGGTATT TGGAAGATGTGGTGGCCCACAAGCAGGCTATCCCTTTCCGCCGTTTCTGTGGTGGCGTCG GTAGAACAGCCCAAGCAAAGGCCCGCCATTCTAATGGGCAGGGTAGGTGGCCTGTGAAGT CCGCCCAGTTCCTTCTAGGTTTGCTGAAAAATGCTGAGAGCAATGCAGAGACAAAGGGGC TGGATGTAGATACACTGTATGTTTCTCACATTCAGGTCAACAAGGCTCAGAAGCAGAGGA GACGTACCTACCGTGCCCACGGTCGCATCAATCCGTACATGTCTTCCCCTTGCCACATTG AGTTAATTCTTGCTGAGAAGGAAGCCCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q93VI3 |
Definition |
sp|Q93VI3|RL171_ARATH 60S ribosomal protein L17-1 OS=Arabidopsis thaliana |
Align length |
157 |
Score (bit) |
266.0 |
E-value |
5.0e-71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SN83 |
Definition |
tr|A9SN83|A9SN83_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
157 |
Score (bit) |
285.0 |
E-value |
9.0e-76 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958827|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_A16, 5' (509 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SN83|A9SN83_PHYPA Predicted protein OS=Physcomitrella paten... 285 9e-76 tr|A9TXV0|A9TXV0_PHYPA Predicted protein (Fragment) OS=Physcomit... 285 1e-75 tr|A9S035|A9S035_PHYPA Predicted protein (Fragment) OS=Physcomit... 283 3e-75 tr|A9SN82|A9SN82_PHYPA Predicted protein (Fragment) OS=Physcomit... 282 6e-75 tr|A9NT26|A9NT26_PICSI Putative uncharacterized protein OS=Picea... 280 2e-74 tr|A9NT14|A9NT14_PICSI Putative uncharacterized protein OS=Picea... 280 2e-74 tr|A9NYW9|A9NYW9_PICSI Putative uncharacterized protein OS=Picea... 279 5e-74 tr|A9RQX8|A9RQX8_PHYPA Predicted protein OS=Physcomitrella paten... 278 1e-73 tr|A7PHG3|A7PHG3_VITVI Chromosome chr17 scaffold_16, whole genom... 272 6e-72 tr|A9PJV5|A9PJV5_POPJC Putative uncharacterized protein OS=Popul... 270 3e-71 tr|A9PA96|A9PA96_POPTR Putative uncharacterized protein OS=Popul... 270 3e-71 tr|A5B412|A5B412_VITVI Putative uncharacterized protein OS=Vitis... 270 3e-71 tr|A9PE02|A9PE02_POPTR Putative uncharacterized protein OS=Popul... 268 9e-71 tr|A9PBU5|A9PBU5_POPTR Putative uncharacterized protein OS=Popul... 268 1e-70 tr|A7QP85|A7QP85_VITVI Chromosome chr1 scaffold_136, whole genom... 268 1e-70 tr|B3TM07|B3TM07_ELAGV Ribosomal protein L17 OS=Elaeis guineensi... 267 3e-70 tr|B3TM08|B3TM08_ELAGV Ribosomal protein OS=Elaeis guineensis va... 266 4e-70 tr|B6T595|B6T595_MAIZE 60S ribosomal protein L17 OS=Zea mays PE=... 265 1e-69 tr|A9PCW9|A9PCW9_POPTR Putative uncharacterized protein OS=Popul... 265 1e-69 tr|Q947H2|Q947H2_PETHY Ribosomal protein OS=Petunia hybrida GN=P... 265 1e-69 tr|Q0WRE5|Q0WRE5_ARATH Ribosomal protein L17-like protein OS=Ara... 265 1e-69 tr|A7QP86|A7QP86_VITVI Chromosome chr1 scaffold_136, whole genom... 265 1e-69 tr|Q6K1W6|Q6K1W6_ORYSJ Os09g0258600 protein OS=Oryza sativa subs... 264 2e-69 tr|A2YZ23|A2YZ23_ORYSI Putative uncharacterized protein OS=Oryza... 264 2e-69 tr|B4FHE4|B4FHE4_MAIZE Putative uncharacterized protein OS=Zea m... 263 3e-69 tr|B4FNT0|B4FNT0_MAIZE Putative uncharacterized protein OS=Zea m... 263 4e-69 tr|Q307X7|Q307X7_SOLTU Ribosomal protein PETRP-like OS=Solanum t... 263 5e-69 tr|B6UDY2|B6UDY2_MAIZE 60S ribosomal protein L17 OS=Zea mays PE=... 262 6e-69 tr|B6T1L4|B6T1L4_MAIZE 60S ribosomal protein L17 OS=Zea mays PE=... 262 8e-69 tr|B6SJH2|B6SJH2_MAIZE 60S ribosomal protein L17 OS=Zea mays PE=... 261 1e-68
>tr|A9SN83|A9SN83_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165821 PE=3 SV=1 Length = 186
Score = 285 bits (729), Expect = 9e-76 Identities = 139/157 (88%), Positives = 147/157 (93%) Frame = +3
Query: 39 MVKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 218 MVKY+R+PDN TKACK+RGSD R FKN REAAQAIK ++LAKAKRYLEDV AHKQA+PF Sbjct: 1 MVKYARDPDNSTKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAVPF 60
Query: 219 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 398 RRFCGGVGRTAQAKARHSNGQGRWPVKSA FLLGLLKNAESNAE KGLDVDTL VSHIQV Sbjct: 61 RRFCGGVGRTAQAKARHSNGQGRWPVKSATFLLGLLKNAESNAEVKGLDVDTLVVSHIQV 120
Query: 399 NKAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL+EKEAP Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEAP 157
>tr|A9TXV0|A9TXV0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152415 PE=3 SV=1 Length = 190
Score = 285 bits (728), Expect = 1e-75 Identities = 139/156 (89%), Positives = 146/156 (93%) Frame = +3
Query: 42 VKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIPFR 221 VKY+REPDN TKACK+RGSD R FKN REAAQAIK ++LAKAKRYLEDV AHKQAIPFR Sbjct: 2 VKYAREPDNATKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIPFR 61
Query: 222 RFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQVN 401 RFCGGVGRTAQAKARHSNGQGRWPVKSA FLLGLLKNAESNAE KGLDVDTL VSHIQVN Sbjct: 62 RFCGGVGRTAQAKARHSNGQGRWPVKSATFLLGLLKNAESNAEVKGLDVDTLVVSHIQVN 121
Query: 402 KAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 +AQKQRRRTYRAHGRINPYMSSPCHIEL+L+EKEAP Sbjct: 122 QAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEAP 157
>tr|A9S035|A9S035_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122013 PE=3 SV=1 Length = 174
Score = 283 bits (725), Expect = 3e-75 Identities = 139/156 (89%), Positives = 146/156 (93%) Frame = +3
Query: 42 VKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIPFR 221 VKY+R+PDN TKACK+RGSD R FKN REAAQAIK ++LAKAKRYLEDV AHKQAIPFR Sbjct: 2 VKYARDPDNSTKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIPFR 61
Query: 222 RFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQVN 401 RFCGGVGRTAQAKARHSNGQGRWPVKSA FLLGLLKNAESNAE KGLDVDTL VSHIQVN Sbjct: 62 RFCGGVGRTAQAKARHSNGQGRWPVKSATFLLGLLKNAESNAEVKGLDVDTLVVSHIQVN 121
Query: 402 KAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 +AQKQRRRTYRAHGRINPYMSSPCHIELIL+EKEAP Sbjct: 122 QAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEAP 157
>tr|A9SN82|A9SN82_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_132604 PE=3 SV=1 Length = 229
Score = 282 bits (722), Expect = 6e-75 Identities = 138/156 (88%), Positives = 145/156 (92%) Frame = +3
Query: 42 VKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIPFR 221 VKY+R+PDN TKACK+RGSD R FKN REAAQAIK ++LAKAKRYLEDV AHKQAIPFR Sbjct: 1 VKYARDPDNATKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIPFR 60
Query: 222 RFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQVN 401 RFCGGVGRTAQAKARHSNGQGRWPVKSA FLLGLLKNAESNAE KGLDVDTL VSHIQVN Sbjct: 61 RFCGGVGRTAQAKARHSNGQGRWPVKSATFLLGLLKNAESNAEVKGLDVDTLVVSHIQVN 120
Query: 402 KAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 +AQKQRRRTYRAHGRINPYMSSPCHIELIL+EKE P Sbjct: 121 QAQKQRRRTYRAHGRINPYMSSPCHIELILSEKETP 156
>tr|A9NT26|A9NT26_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 280 bits (717), Expect = 2e-74 Identities = 136/157 (86%), Positives = 146/157 (92%) Frame = +3
Query: 39 MVKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 218 MVKYSREP N TK+ K+RGSD R FKN RE AQA+KKL L KAKRYLEDV+AHKQAIPF Sbjct: 1 MVKYSREPGNPTKSAKARGSDLRVHFKNTRETAQAVKKLSLTKAKRYLEDVIAHKQAIPF 60
Query: 219 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 398 RRFCGGVGRTAQAK+R+SNGQGRWPVKSA+FLLGLLKNAESNAE KGLDVDTLY+SHIQV Sbjct: 61 RRFCGGVGRTAQAKSRNSNGQGRWPVKSAEFLLGLLKNAESNAEVKGLDVDTLYISHIQV 120
Query: 399 NKAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL+EKEAP Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEAP 157
>tr|A9NT14|A9NT14_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 280 bits (717), Expect = 2e-74 Identities = 136/157 (86%), Positives = 144/157 (91%) Frame = +3
Query: 39 MVKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 218 MVKYSREPDN TK+CK+RGSD R FKN RE AQA+KKL LAKAK YLEDV+AHKQAIPF Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAQAVKKLPLAKAKAYLEDVLAHKQAIPF 60
Query: 219 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 398 RRFCGGVGRTAQAK+RHSNGQGRWPVKS QFLL LLKNAESNAE KGLDVD LY+SHIQV Sbjct: 61 RRFCGGVGRTAQAKSRHSNGQGRWPVKSVQFLLQLLKNAESNAEVKGLDVDALYISHIQV 120
Query: 399 NKAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL+EKE P Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEVP 157
>tr|A9NYW9|A9NYW9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 279 bits (714), Expect = 5e-74 Identities = 135/157 (85%), Positives = 144/157 (91%) Frame = +3
Query: 39 MVKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 218 MVKYSREPDN TK+CK+RGSD R FKN RE AQA+KKL +AKAK YLEDV+AHKQAIPF Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAQAVKKLPVAKAKAYLEDVLAHKQAIPF 60
Query: 219 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 398 RRFCGGVGRTAQAK+RHSNGQGRWPVKS QFLL LLKNAESNAE KGLDVD LY+SHIQV Sbjct: 61 RRFCGGVGRTAQAKSRHSNGQGRWPVKSVQFLLQLLKNAESNAEVKGLDVDALYISHIQV 120
Query: 399 NKAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL+EKE P Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEVP 157
>tr|A9RQX8|A9RQX8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177216 PE=3 SV=1 Length = 187
Score = 278 bits (711), Expect = 1e-73 Identities = 137/157 (87%), Positives = 145/157 (92%) Frame = +3
Query: 39 MVKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 218 MVKY+R+P N TKACK+RGSD R FKN REAAQAIK ++LAKAKRYLEDV AHKQAIPF Sbjct: 1 MVKYARDPVNATKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIPF 60
Query: 219 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 398 RRFCGGVGRTAQAKARHSNGQGRWPVKSA FLL LLKNAESNAE KGLDVD+L VSHIQV Sbjct: 61 RRFCGGVGRTAQAKARHSNGQGRWPVKSATFLLDLLKNAESNAEVKGLDVDSLVVSHIQV 120
Query: 399 NKAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 N+AQKQRRRTYRAHGRINPYMSSPCHIELIL+EKEAP Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEAP 157
>tr|A7PHG3|A7PHG3_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017930001 PE=3 SV=1 Length = 216
Score = 272 bits (696), Expect = 6e-72 Identities = 133/158 (84%), Positives = 144/158 (91%) Frame = +3
Query: 36 AMVKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIP 215 AMVKYSREPDN TK+CK+RGSD R FKN RE A AI+KL L KAKRYLEDV+AHKQAIP Sbjct: 33 AMVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLRLTKAKRYLEDVLAHKQAIP 92
Query: 216 FRRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQ 395 F+RFC GVGRTAQAK RHSNGQGRWPVKSA+F+L LLKNAESNA+ KGLDVD+LYVSHIQ Sbjct: 93 FQRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYVSHIQ 152
Query: 396 VNKAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 VN+AQKQRRRTYRAHGRINPYMSSPCHIELIL+EKE P Sbjct: 153 VNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEP 190
>tr|A9PJV5|A9PJV5_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 178
Score = 270 bits (690), Expect = 3e-71 Identities = 130/157 (82%), Positives = 141/157 (89%) Frame = +3
Query: 39 MVKYSREPDNITKACKSRGSDRRALFKNAREAAQAIKKLDLAKAKRYLEDVVAHKQAIPF 218 MVKYSREPDN TK+CK+RGSD R FKN RE A A++KL L KAKRYLEDV+AHKQAIPF Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFALRKLPLVKAKRYLEDVMAHKQAIPF 60
Query: 219 RRFCGGVGRTAQAKARHSNGQGRWPVKSAQFLLGLLKNAESNAETKGLDVDTLYVSHIQV 398 RRFCGGVGRTAQAK RHSNGQGRWP KSA+F+L LLKNAESNAE KGLDVD LY++HIQV Sbjct: 61 RRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYITHIQV 120
Query: 399 NKAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEAP 509 N+AQKQRRRTYRAHGRINPYMSSPCHIEL L+EKE P Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEP 157
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