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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK958850
Clone id TST39A01NGRL0003_B16
Library
Length 621
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_B16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TGGATGCTGGCTTCTTGTTCACTGGAGTGCGCTTCGATAAGAAGCGATTTGCTGCCGATT
TTAAGAAGTTCGAGAAGAGGGAGGAGGGAGCCCCTGTTCCGCCTGCTGGCACGGTTGAAC
GAGATTTGGCAGCTGATGAGACTAAGACGAATAAACGGAAGAAGAGGGCTTACGACGAGG
ATGCGGGCATTGTGAACATCTTCAAGCCCACTCAAGAGCTGGTCGCAGCAGAGTCCCAAG
CAGATGAAAAGCAACGACAGAGGCATGAAGCTGCGAGGGACGAGGAATTTGCATGTGTGC
TACGGAAGAAGTTCCGGGTTCATGTATCAGGTCACAACGTCCCGGCTCCTCTCTCCAGCT
TTCAAGATCTACGGTCAGTTTATGGTTGTCAGTCATACCTTATGAGAAATTTAGGCCTAG
CAGGATTCTTAGAGCCGACTCCCATTCAGCGGCAAGCCATTCCTGCCCTGCTTTCAGGTC
AGGAGTTCTTCGCTTGTGCACCCACAGGGTCTGGGAAGACGTTGGCATTTGCCCTTCCTA
TCCTTATGATGCTTGCTGCTCCCAAGAAAGATGGCATCCGTGCTGTGATCTTGTGTCCAA
CTCGCGAACTTGCCAAACAGA
■■Homology search results ■■ -
sp_hit_id Q5K5B6
Definition sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp. japonica
Align length 181
Score (bit) 171.0
E-value 2.0e-42
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958850|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_B16, 5'
         (621 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=O...   171   2e-42
sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=A...   152   1e-36
sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 ...   124   5e-28
sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 ...   120   4e-27
sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 ...   119   2e-26
sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS...   118   2e-26
sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 ...   116   1e-25
sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia...   110   8e-24
sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida ...   106   1e-22
sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyvero...   105   2e-22
sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwa...   104   3e-22
sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Pichia g...   103   5e-22
sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryom...   102   2e-21
sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharo...   101   4e-21
sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderom...   101   4e-21
sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharo...   100   5e-21
sp|Q75AE1|ROK1_ASHGO ATP-dependent RNA helicase ROK1 OS=Ashbya g...   100   8e-21
sp|A3GHW9|ROK1_PICST ATP-dependent RNA helicase ROK1 OS=Pichia s...    99   2e-20
sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida ...    96   2e-19
sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 ...    92   3e-18
sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 ...    89   2e-17
sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=O...    88   4e-17
sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS...    87   9e-17
sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicas...    86   1e-16
sp|Q5BET6|ROK1_EMENI ATP-dependent RNA helicase rok1 OS=Emericel...    84   6e-16
sp|Q26696|DDX17_TRYBB Putative DEAD-box RNA helicase HEL64 OS=Tr...    83   1e-15
sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS...    83   1e-15
sp|A1CHL3|PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helica...    83   1e-15
sp|A7E449|DBP2_SCLS1 ATP-dependent RNA helicase dbp2 OS=Scleroti...    82   3e-15
sp|A6SFW7|DBP2_BOTFB ATP-dependent RNA helicase dbp2 OS=Botryoti...    82   3e-15

>sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57
           OS=Oryza sativa subsp. japonica GN=Os07g0647900 PE=2
           SV=2
          Length = 540

 Score =  171 bits (434), Expect = 2e-42
 Identities = 92/181 (50%), Positives = 115/181 (63%), Gaps = 13/181 (7%)
 Frame = +3

Query: 117 ERDLAADETKTNKRKKRAYDEDAGIVNIFKPTQELVAAESQADEKQ-------------R 257
           +R   A   K+ KR+    D  +  V  F   + L A + + D ++             R
Sbjct: 50  KRQSKAKAKKSKKRRAEGADSASDAVEGFSVFKGLAAKKDEDDSEKKVETGKSEDSEVVR 109

Query: 258 QRHEAARDEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEP 437
           +R E  R+ E A +LRKKF +H+SG NVPAPL +F++L S YGC SYL+ NL   GF EP
Sbjct: 110 RRKEVEREIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEP 169

Query: 438 TPIQRQAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAK 617
           TPIQRQAIP LLSG+E FACAPTGSGKTLAF  PILM +    K+G++AVILCPTRELA 
Sbjct: 170 TPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAA 229

Query: 618 Q 620
           Q
Sbjct: 230 Q 230


>sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57
           OS=Arabidopsis thaliana GN=RH57 PE=2 SV=1
          Length = 541

 Score =  152 bits (384), Expect = 1e-36
 Identities = 81/167 (48%), Positives = 110/167 (65%), Gaps = 9/167 (5%)
 Frame = +3

Query: 147 TNKRKKRAYDEDAGI--VNIFKPTQELVAAESQADEK-------QRQRHEAARDEEFACV 299
           ++K++KR       +   ++FK +++   A+ +A+E+       +  + E  R  E   +
Sbjct: 60  SSKKRKRRSSNSVPVEGFDVFKSSKK-ARAKGKAEEQITKNEIVENPKKELNRQMERDAL 118

Query: 300 LRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAIPALLSG 479
            RK++ +HVSG+N+P PL SF +L S YGC+ Y++RNL   GF EPTPIQRQAIP LLSG
Sbjct: 119 SRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSG 178

Query: 480 QEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAKQ 620
           +E FACAPTGSGKT AF  P+L+ L  P  DGIRAVIL P RELA Q
Sbjct: 179 RECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQ 225


>sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52
           OS=Homo sapiens GN=DDX52 PE=1 SV=2
          Length = 599

 Score =  124 bits (310), Expect = 5e-28
 Identities = 71/176 (40%), Positives = 102/176 (57%), Gaps = 8/176 (4%)
 Frame = +3

Query: 117 ERDLAADETKTNKRKKRAYDEDAGIVNIFKPTQELVAAESQADEKQRQRH--------EA 272
           E  L   + + +K+K++    +          Q + + E++ ++K+ QR         E 
Sbjct: 75  EESLTERKREQSKKKRKTMTSEIASQEEGATIQWMSSVEAKIEDKKVQRESKLTSGKLEN 134

Query: 273 ARDEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQR 452
            R E+    LR K ++HV G ++P P+++FQ L   Y   S L++N+  AGF  PTPIQ 
Sbjct: 135 LRKEKIN-FLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQM 193

Query: 453 QAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAKQ 620
           QAIP +L G+E  A APTGSGKTLAF++PILM L  P   G RA+I+ PTRELA Q
Sbjct: 194 QAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQ 249


>sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52
           OS=Bos taurus GN=DDX52 PE=2 SV=1
          Length = 596

 Score =  120 bits (302), Expect = 4e-27
 Identities = 70/169 (41%), Positives = 96/169 (56%), Gaps = 8/169 (4%)
 Frame = +3

Query: 138 ETKTNKRKKRAYDEDAGIVNIFKPTQELVAAESQADEKQRQRH--------EAARDEEFA 293
           E K   RKK+    +          Q + + E++ ++K  +R         E  R E+  
Sbjct: 80  ERKKQNRKKKKITSEITSEEEVSTIQWISSVEAKIEDKNVKRKNKLTSGKLEQLRKEKLN 139

Query: 294 CVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAIPALL 473
              R K ++HV G ++P P+++FQ L   Y   S L++N+  AGF  PTPIQ QAIP +L
Sbjct: 140 -FFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQTPTPIQMQAIPVML 198

Query: 474 SGQEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAKQ 620
            G+E  A APTGSGKTLAF++PILM L  P   G RA+I+ PTRELA Q
Sbjct: 199 HGRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISPTRELASQ 247


>sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52
           OS=Mus musculus GN=Ddx52 PE=2 SV=1
          Length = 598

 Score =  119 bits (297), Expect = 2e-26
 Identities = 70/167 (41%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
 Frame = +3

Query: 138 ETKTNKRKKRAY------DEDAGIVNIFKPTQELVAAESQADEKQRQRHEAARDEEFACV 299
           E K  KRKK         D D GI        +L   +   ++K          +E    
Sbjct: 84  EPKKKKRKKMTSEVPAQEDLDGGIQWTSSVEAKLQEEKVSGEKKLTSGKLEHLRKEKVNF 143

Query: 300 LRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAIPALLSG 479
            R K ++HV G ++P P+++FQ L   Y   S L++N+  AGF  PTPIQ QAIP +L G
Sbjct: 144 FRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHG 203

Query: 480 QEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAKQ 620
           +E  A APTGSGKTLAF++PILM L  P   G RA+++ PTRELA Q
Sbjct: 204 RELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQ 250


>sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52
           OS=Rattus norvegicus GN=Ddx52 PE=2 SV=1
          Length = 598

 Score =  118 bits (296), Expect = 2e-26
 Identities = 73/178 (41%), Positives = 100/178 (56%), Gaps = 7/178 (3%)
 Frame = +3

Query: 108 GTVERDLAADETKTNKRKKRAYDEDA-----GIVNIFKPTQELVAAESQADEKQ--RQRH 266
           G +ER   + E K  KRKK   D  A     G +      +  +  +    EK+   ++ 
Sbjct: 77  GLLER---SKEPKKKKRKKMTADVPAQEDLDGTIQWTSSVEAKLQDKKANGEKKLTSEKL 133

Query: 267 EAARDEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPI 446
           E  R E+     R K ++HV G ++P P+++FQ L   Y     L++N+  AGF  PTPI
Sbjct: 134 EHLRKEKIN-FFRNKHKIHVQGTDLPDPIATFQQLDQEYKISPRLLQNILDAGFQVPTPI 192

Query: 447 QRQAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAKQ 620
           Q QAIP +L G+E  A APTGSGKTLAF++PILM L  P   G RA+++ PTRELA Q
Sbjct: 193 QMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQ 250


>sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52
           OS=Dictyostelium discoideum GN=ddx52 PE=3 SV=1
          Length = 668

 Score =  116 bits (290), Expect = 1e-25
 Identities = 62/162 (38%), Positives = 93/162 (57%)
 Frame = +3

Query: 135 DETKTNKRKKRAYDEDAGIVNIFKPTQELVAAESQADEKQRQRHEAARDEEFACVLRKKF 314
           +++  N+    + D D    N  K   + V+ E+Q D+ +R+              R K 
Sbjct: 132 NKSNENENSDDSDDSDDSGKNKNKNKNKKVSKETQEDKHKRE----------IATFRNKH 181

Query: 315 RVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAIPALLSGQEFFA 494
           R+ V G ++P P++ F  L + +  + YL+ N+   G+ EP+PIQ Q IP LL  +E  A
Sbjct: 182 RIKVDGTDIPDPMTEFSQLENRFKVRKYLLNNINEIGYKEPSPIQMQVIPILLKEREVVA 241

Query: 495 CAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAKQ 620
            APTGSGKT +F++PIL  L  PKK+G R+VI+ PTRELA+Q
Sbjct: 242 IAPTGSGKTASFSIPILQALYEPKKEGFRSVIIAPTRELAQQ 283


>sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia
           lipolytica GN=ROK1 PE=3 SV=1
          Length = 547

 Score =  110 bits (274), Expect = 8e-24
 Identities = 64/191 (33%), Positives = 108/191 (56%), Gaps = 13/191 (6%)
 Frame = +3

Query: 87  GAPVPPAGTVERDL------AADETKTNKRKKRAYDEDAGIVNIFKPTQELVAAESQADE 248
           GA +   G   +DL      A  +T+ N   + A + D         +++ VA E++ D 
Sbjct: 10  GATIQRNGKHRKDLTLLNHAAPKDTQDNVDIEVARETDFFKTKTDTYSKKRVAEEAELDN 69

Query: 249 KQRQRHEAA--RDEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLA 422
           ++ +          E A V R K +++++G + P P+ SF+DL + +    YL+ NL   
Sbjct: 70  EEEEEAPPPIISTPEEAVVFRNKHKINITGEDSPLPIGSFEDLITRFNLHPYLLANLKKN 129

Query: 423 GFLEPTPIQRQAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAAPK-----KDGIRAV 587
            + +PTPIQ ++IP +L+G++  ACAPTGSGKT+A+++P++ ML   K     K GI+A+
Sbjct: 130 KYTDPTPIQCESIPTMLNGRDLIACAPTGSGKTMAYSIPMVEMLGKKKGSKDAKKGIKAL 189

Query: 588 ILCPTRELAKQ 620
           ++ PT+ELA Q
Sbjct: 190 VVAPTKELASQ 200


>sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida
           glabrata GN=ROK1 PE=3 SV=1
          Length = 565

 Score =  106 bits (264), Expect = 1e-22
 Identities = 52/114 (45%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
 Frame = +3

Query: 282 EEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAI 461
           +E A  LRK ++ +++G ++P P+ SF+DL S +     L+ NL    F EPTPIQ +AI
Sbjct: 96  KEQASALRKSYKGNITGEDIPLPIGSFEDLISRFSLDKRLLNNLIENHFTEPTPIQCEAI 155

Query: 462 PALLSGQEFFACAPTGSGKTLAFALPILMMLAAPKK-DGIRAVILCPTRELAKQ 620
           P  L+G++  ACAPTGSGKTLAF +P+L  +   K   G++ +I+ PT+ELA Q
Sbjct: 156 PLCLNGRDLLACAPTGSGKTLAFLIPLLQQIIEEKNFSGVKGLIISPTKELATQ 209


>sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1
           OS=Kluyveromyces lactis GN=ROK1 PE=3 SV=1
          Length = 579

 Score =  105 bits (262), Expect = 2e-22
 Identities = 71/209 (33%), Positives = 105/209 (50%), Gaps = 31/209 (14%)
 Frame = +3

Query: 87  GAPVPPAGTVERDLAADETKTNKRKKR--------AYDE-----------DAGIVNIFKP 209
           GA +   G   R  +AD +  N++K +        A DE           +  I+N  K 
Sbjct: 10  GASIRKNGDSNRTQSADFSMANEKKSKTAGSSSTPARDEQQLTKELDFFRNKKIMNKVKS 69

Query: 210 TQELVAAESQADEKQRQRHEAARDEEF-----------ACVLRKKFRVHVSGHNVPAPLS 356
                  E +  E  ++  E   D+E            A  LRK ++ +VSG++VP P+ 
Sbjct: 70  ESTKGEGEDEVQEDNQEEDEDHADDETELSGKIITKQDALKLRKSYQGNVSGNSVPLPIG 129

Query: 357 SFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAIPALLSGQEFFACAPTGSGKTLAFAL 536
           SF+DL + +     L+ NL    F EPTPIQ ++IP LL  ++  ACAPTGSGKTLAF +
Sbjct: 130 SFEDLITRFQFDKRLLNNLIENNFTEPTPIQSESIPILLHERDMIACAPTGSGKTLAFLI 189

Query: 537 PILMMLAAPKKD-GIRAVILCPTRELAKQ 620
           P+L  +   K   G++ +I+ PT+ELA Q
Sbjct: 190 PLLQQIINDKTTVGLKGLIISPTKELANQ 218
tr_hit_id A7PSZ9
Definition tr|A7PSZ9|A7PSZ9_VITVI Chromosome chr8 scaffold_29, whole genome shotgun sequence OS=Vitis vinifera
Align length 207
Score (bit) 173.0
E-value 6.0e-42
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958850|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_B16, 5'
         (621 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PSZ9|A7PSZ9_VITVI Chromosome chr8 scaffold_29, whole genome...   173   6e-42
tr|A2YPC3|A2YPC3_ORYSI Putative uncharacterized protein OS=Oryza...   171   2e-41
tr|A5BS93|A5BS93_VITVI Putative uncharacterized protein OS=Vitis...   162   2e-38
tr|A9RWJ2|A9RWJ2_PHYPA Predicted protein (Fragment) OS=Physcomit...   150   8e-35
tr|B6NYH6|B6NYH6_BRAFL Putative uncharacterized protein OS=Branc...   129   1e-28
tr|Q59H21|Q59H21_HUMAN ATP-dependent RNA helicase ROK1 isoform a...   124   6e-27
tr|B6MS62|B6MS62_BRAFL Putative uncharacterized protein OS=Branc...   119   1e-25
tr|A8MTP9|A8MTP9_HUMAN Putative uncharacterized protein DDX52 OS...   119   1e-25
tr|Q3UZY9|Q3UZY9_MOUSE Putative uncharacterized protein OS=Mus m...   119   2e-25
tr|Q3TKX4|Q3TKX4_MOUSE Putative uncharacterized protein (Fragmen...   119   2e-25
tr|A1EC69|A1EC69_RAT ATP-dependent RNA helicase OS=Rattus norveg...   118   2e-25
tr|A1EC68|A1EC68_RAT ATP-dependent RNA helicase OS=Rattus norveg...   118   2e-25
tr|B3SC12|B3SC12_TRIAD Putative uncharacterized protein (Fragmen...   117   5e-25
tr|Q5FWY7|Q5FWY7_RAT DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 O...   115   2e-24
tr|A7SFZ1|A7SFZ1_NEMVE Predicted protein (Fragment) OS=Nematoste...   114   4e-24
tr|B3M3V9|B3M3V9_DROAN GF25239 OS=Drosophila ananassae GN=GF2523...   114   6e-24
tr|Q68F58|Q68F58_XENLA LOC446276 protein (Fragment) OS=Xenopus l...   112   1e-23
tr|Q4SFR8|Q4SFR8_TETNG Chromosome 7 SCAF14601, whole genome shot...   112   1e-23
tr|Q4QR54|Q4QR54_XENLA LOC446276 protein (Fragment) OS=Xenopus l...   112   1e-23
tr|A0AUS6|A0AUS6_XENLA LOC446276 protein OS=Xenopus laevis GN=dd...   112   1e-23
tr|Q7ZY19|Q7ZY19_XENLA MGC53409 protein OS=Xenopus laevis PE=2 SV=1   111   3e-23
tr|Q5F3Y6|Q5F3Y6_CHICK Putative uncharacterized protein OS=Gallu...   110   5e-23
tr|Q01CR6|Q01CR6_OSTTA DEAD/DEAH box helicase, putative (ISS) OS...   110   7e-23
tr|B4N4N5|B4N4N5_DROWI GK12420 OS=Drosophila willistoni GN=GK124...   110   7e-23
tr|Q5I091|Q5I091_XENTR Ddx52-prov protein (Fragment) OS=Xenopus ...   110   9e-23
tr|Q0IJ24|Q0IJ24_XENTR Ddx52 protein (Fragment) OS=Xenopus tropi...   110   9e-23
tr|Q32PQ3|Q32PQ3_DANRE Ddx52 protein (Fragment) OS=Danio rerio G...   109   1e-22
tr|Q1ECZ5|Q1ECZ5_DANRE DEAD (Asp-Glu-Ala-Asp) box polypeptide 52...   109   1e-22
tr|A4RUB4|A4RUB4_OSTLU Predicted protein OS=Ostreococcus lucimar...   109   1e-22
tr|B4L0G8|B4L0G8_DROMO GI13618 OS=Drosophila mojavensis GN=GI136...   108   2e-22

>tr|A7PSZ9|A7PSZ9_VITVI Chromosome chr8 scaffold_29, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023153001
           PE=4 SV=1
          Length = 524

 Score =  173 bits (439), Expect = 6e-42
 Identities = 97/207 (46%), Positives = 122/207 (58%), Gaps = 4/207 (1%)
 Frame = +3

Query: 12  FLFTGVXXXXXXXXXXXXXXXXXXXGAPVPPAGTVERDLAADETKTNKRKKRAYDEDAGI 191
           FLF+G+                      +  +G  E +  A   K  KRK    D   G 
Sbjct: 7   FLFSGITFDKKKFAADFSRFKEKKESDDLVESGKSEAEEGARPVKKRKRKATVADPVEGF 66

Query: 192 VNIFKPTQELVAAESQADEKQRQ----RHEAARDEEFACVLRKKFRVHVSGHNVPAPLSS 359
            N+FK ++       Q D+++ +    + E  R  E   +LRKK ++H+SG+NVP+PL +
Sbjct: 67  -NVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHKIHISGNNVPSPLEN 125

Query: 360 FQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAIPALLSGQEFFACAPTGSGKTLAFALP 539
           F +L S YGC+SYL+ NL   GF EPTPIQRQAIP LLSG+E FACAPTGSGKTLAF  P
Sbjct: 126 FSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFVCP 185

Query: 540 ILMMLAAPKKDGIRAVILCPTRELAKQ 620
           +LM L    KDGIRAVILCPTRELA Q
Sbjct: 186 MLMKLKHASKDGIRAVILCPTRELAAQ 212


>tr|A2YPC3|A2YPC3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_27114 PE=4 SV=1
          Length = 540

 Score =  171 bits (434), Expect = 2e-41
 Identities = 92/181 (50%), Positives = 115/181 (63%), Gaps = 13/181 (7%)
 Frame = +3

Query: 117 ERDLAADETKTNKRKKRAYDEDAGIVNIFKPTQELVAAESQADEKQ-------------R 257
           +R   A   K+ KR+    D  +  V  F   + L A + + D ++             R
Sbjct: 50  KRQSKAKAKKSKKRRAEGADSASDAVEGFSVFKGLAAKKDEDDSEKKVETGKSEDSEVVR 109

Query: 258 QRHEAARDEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEP 437
           +R E  R+ E A +LRKKF +H+SG NVPAPL +F++L S YGC SYL+ NL   GF EP
Sbjct: 110 RRKEVEREIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEP 169

Query: 438 TPIQRQAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAK 617
           TPIQRQAIP LLSG+E FACAPTGSGKTLAF  PILM +    K+G++AVILCPTRELA 
Sbjct: 170 TPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAA 229

Query: 618 Q 620
           Q
Sbjct: 230 Q 230


>tr|A5BS93|A5BS93_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_032421 PE=4 SV=1
          Length = 554

 Score =  162 bits (409), Expect = 2e-38
 Identities = 94/207 (45%), Positives = 118/207 (57%), Gaps = 4/207 (1%)
 Frame = +3

Query: 12  FLFTGVXXXXXXXXXXXXXXXXXXXGAPVPPAGTVERDLAADETKTNKRKKRAYDEDAGI 191
           FLF+G+                      +  +G  E +  A   K  KRK    D   G 
Sbjct: 7   FLFSGITFDKKKFAADFSRFKEKKESDDLVESGKSEAEEGARPVKKRKRKATVADPVEGF 66

Query: 192 VNIFKPTQELVAAESQADEKQRQ----RHEAARDEEFACVLRKKFRVHVSGHNVPAPLSS 359
            N+FK ++       Q D+++ +    + E  R  E   +LRKK  +H+SG+NVP+PL +
Sbjct: 67  -NVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHXIHISGNNVPSPLEN 125

Query: 360 FQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAIPALLSGQEFFACAPTGSGKTLAFALP 539
           F +L S YGC+SYL+ NL   GF EPTPIQRQAIP    G+E FACAPTGSGKTLAF  P
Sbjct: 126 FSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIP----GRECFACAPTGSGKTLAFVCP 181

Query: 540 ILMMLAAPKKDGIRAVILCPTRELAKQ 620
           +LM L    KDGIRAVILCPTRELA Q
Sbjct: 182 MLMKLKHASKDGIRAVILCPTRELAAQ 208


>tr|A9RWJ2|A9RWJ2_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_41894 PE=4 SV=1
          Length = 405

 Score =  150 bits (378), Expect = 8e-35
 Identities = 70/106 (66%), Positives = 88/106 (83%)
 Frame = +3

Query: 303 RKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAIPALLSGQ 482
           RKK+++HVSG +VPAPL +F+ LR+ Y C+ YLM+N+  AG+ EPTPIQRQAI  LL+ +
Sbjct: 3   RKKYQIHVSGRDVPAPLVAFEQLRTQYRCRKYLMKNIKEAGYTEPTPIQRQAITTLLAER 62

Query: 483 EFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAKQ 620
           E FACAPTGSGKTLAF+LPILM L  P K+G+RA++LCPTRELA Q
Sbjct: 63  ECFACAPTGSGKTLAFSLPILMKLRVPSKEGLRALVLCPTRELALQ 108


>tr|B6NYH6|B6NYH6_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_239041 PE=4 SV=1
          Length = 595

 Score =  129 bits (324), Expect = 1e-28
 Identities = 71/169 (42%), Positives = 102/169 (60%), Gaps = 4/169 (2%)
 Frame = +3

Query: 126 LAADETKTNKRKKRAYDEDAGIVNIFKPTQELVAAESQADEKQR----QRHEAARDEEFA 293
           L     K  KRK++    D+   +  +   ++ A+E +   K++     + E  + E+  
Sbjct: 96  LGVQSKKGKKRKQKGELADSDDSDSLQLLGDIKASEKKKKRKKKGLTVNKVEQIKQEKVK 155

Query: 294 CVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQRQAIPALL 473
              R+K R+HV G ++P P++SFQ+L+ VYG    ++ NL   G+ EPTPIQ QAIP +L
Sbjct: 156 H-FRRKNRIHVQGSDIPTPVTSFQELQGVYGIHPQIITNLQGLGYEEPTPIQMQAIPLML 214

Query: 474 SGQEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAKQ 620
             +E  ACAPTGSGKT AF LPIL  L  P++ G RAV++ PTRELAKQ
Sbjct: 215 QRREILACAPTGSGKTAAFILPILHHLREPRRQGFRAVVVSPTRELAKQ 263


>tr|Q59H21|Q59H21_HUMAN ATP-dependent RNA helicase ROK1 isoform a
           variant (Fragment) OS=Homo sapiens PE=2 SV=1
          Length = 512

 Score =  124 bits (310), Expect = 6e-27
 Identities = 71/176 (40%), Positives = 102/176 (57%), Gaps = 8/176 (4%)
 Frame = +3

Query: 117 ERDLAADETKTNKRKKRAYDEDAGIVNIFKPTQELVAAESQADEKQRQRH--------EA 272
           E  L   + + +K+K++    +          Q + + E++ ++K+ QR         E 
Sbjct: 74  EESLTERKREQSKKKRKTMTSEIASQEEGATIQWMSSVEAKIEDKKVQRESKLTSGKLEN 133

Query: 273 ARDEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFLEPTPIQR 452
            R E+    LR K ++HV G ++P P+++FQ L   Y   S L++N+  AGF  PTPIQ 
Sbjct: 134 LRKEKIN-FLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQM 192

Query: 453 QAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTRELAKQ 620
           QAIP +L G+E  A APTGSGKTLAF++PILM L  P   G RA+I+ PTRELA Q
Sbjct: 193 QAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQ 248


>tr|B6MS62|B6MS62_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_124435 PE=4 SV=1
          Length = 724

 Score =  119 bits (299), Expect = 1e-25
 Identities = 74/200 (37%), Positives = 108/200 (54%), Gaps = 35/200 (17%)
 Frame = +3

Query: 126 LAADETKTNKRKKRAYDEDAGIVNIFKPTQELVAAESQADEKQRQRH---------EAAR 278
           L     K  KRK++    D+   +  + + +L+     +++K+++R          E  +
Sbjct: 96  LRVQSKKGKKRKQKGELADSDDSDYSEDSLQLLGDIKASEKKKKKRKKKDLTVNKVEQIK 155

Query: 279 DEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNL-GLA----------- 422
            E+ +   R+K R+HV G ++PAP++SFQ+L+ VYG    ++ NL GL            
Sbjct: 156 QEKLS-EFRRKNRIHVQGSDIPAPVTSFQELQGVYGIHPQILTNLQGLGYEEPTPIQMQA 214

Query: 423 --------------GFLEPTPIQRQAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAA 560
                         G+ EPTPIQ QAIP +L  +E  ACAPTGSGKT AF LPIL  L  
Sbjct: 215 IPLMLQILTNLQGLGYEEPTPIQMQAIPLMLQRREILACAPTGSGKTAAFILPILHHLRE 274

Query: 561 PKKDGIRAVILCPTRELAKQ 620
           P++ G RAV++ PTRELAKQ
Sbjct: 275 PRRQGFRAVVVSPTRELAKQ 294


>tr|A8MTP9|A8MTP9_HUMAN Putative uncharacterized protein DDX52
           OS=Homo sapiens GN=DDX52 PE=4 SV=1
          Length = 491

 Score =  119 bits (299), Expect = 1e-25
 Identities = 66/140 (47%), Positives = 89/140 (63%), Gaps = 8/140 (5%)
 Frame = +3

Query: 225 AAESQADEKQRQRH--------EAARDEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSV 380
           + E++ ++K+ QR         E  R E+    LR K ++HV G ++P P+++FQ L   
Sbjct: 3   SVEAKIEDKKVQRESKLTSGKLENLRKEKIN-FLRNKHKIHVQGTDLPDPIATFQQLDQE 61

Query: 381 YGCQSYLMRNLGLAGFLEPTPIQRQAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAA 560
           Y   S L++N+  AGF  PTPIQ QAIP +L G+E  A APTGSGKTLAF++PILM L  
Sbjct: 62  YKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQ 121

Query: 561 PKKDGIRAVILCPTRELAKQ 620
           P   G RA+I+ PTRELA Q
Sbjct: 122 PANKGFRALIISPTRELASQ 141


>tr|Q3UZY9|Q3UZY9_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=Ddx52 PE=2 SV=1
          Length = 598

 Score =  119 bits (297), Expect = 2e-25
 Identities = 71/183 (38%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
 Frame = +3

Query: 99  PPAGTVERDLAADETKTNKRKKRAY---------DEDAGIVNIFKPTQELVAAESQADEK 251
           PP     + +  + +K  K+KKR           D D GI        +L   +   ++K
Sbjct: 68  PPNEEKTQGVLLERSKEPKKKKRKKMTSEVPAQEDFDGGIQWTSSVEAKLQDEKVSGEKK 127

Query: 252 QRQRHEAARDEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFL 431
                     +E     R K ++HV G ++P P+++FQ L   Y   S L++N+  AGF 
Sbjct: 128 LTSGKLEHLRKEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQ 187

Query: 432 EPTPIQRQAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTREL 611
            PTPIQ QAIP +L G+E  A APTGSGKTLAF++PILM L  P   G RA+++ PTREL
Sbjct: 188 VPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTREL 247

Query: 612 AKQ 620
           A Q
Sbjct: 248 ASQ 250


>tr|Q3TKX4|Q3TKX4_MOUSE Putative uncharacterized protein (Fragment)
           OS=Mus musculus GN=Ddx52 PE=2 SV=1
          Length = 595

 Score =  119 bits (297), Expect = 2e-25
 Identities = 71/183 (38%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
 Frame = +3

Query: 99  PPAGTVERDLAADETKTNKRKKRAY---------DEDAGIVNIFKPTQELVAAESQADEK 251
           PP     + +  + +K  K+KKR           D D GI        +L   +   ++K
Sbjct: 68  PPNEEKTQGVLLERSKEPKKKKRKKMTSEVPAQEDFDGGIQWTSSVEAKLQDEKVSGEKK 127

Query: 252 QRQRHEAARDEEFACVLRKKFRVHVSGHNVPAPLSSFQDLRSVYGCQSYLMRNLGLAGFL 431
                     +E     R K ++HV G ++P P+++FQ L   Y   S L++N+  AGF 
Sbjct: 128 LTSGKLEHLRKEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQ 187

Query: 432 EPTPIQRQAIPALLSGQEFFACAPTGSGKTLAFALPILMMLAAPKKDGIRAVILCPTREL 611
            PTPIQ QAIP +L G+E  A APTGSGKTLAF++PILM L  P   G RA+++ PTREL
Sbjct: 188 VPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTREL 247

Query: 612 AKQ 620
           A Q
Sbjct: 248 ASQ 250