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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK958855
Clone id TST39A01NGRL0003_B21
Library
Length 595
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_B21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTCGTTTCTATACGAGAAGAGTAGTACATGGAGGTGGATCGTGGCATCATGCAAAGCATC
CCAGACTTTCTTCCTGACCTTTAGCGCCCTGTGCGTGGGTGGGTCCGTGGCTTTGGGACA
CGCTACCATGTACCTCACGTCCTACAATGAACACCGCCTGCGTGAGCGTCTCTCCAAGAA
TGTGGACACAGGGATGATGTCCAAGGCCAATAATGATATGCTTGGCGAACTTCTTAGTGA
TGTTAAGAACAAAAAAAACATGGATGAGAGATATGCTGCATCATTACAAGGAAAGATATT
GACTGGTCCACCTAATGCCCTGTTTGAACGCCGTGAGAGAACATCATGGAGACCGCTACC
TGAACAAGCTGATGATCACGAAAATAAAGGACATTGAACTCCTTCATAAGTTTAGCATGG
CCTTTTGGCTGCCTAGGTTTCATGCTTGCCAGATAGATACTTATGGGTCTAAATGGTTCT
CATATAGCATGGTATTTTATGATGGATACTTGAGAATTGTCTATAGCATGAGTGAGATGC
ATTGGTGGCTAGTGTGATCTCTCTCACAGACGATGATCTTGTTGAGCATGCAGCA
■■Homology search results ■■ -
sp_hit_id P53968
Definition sp|P53968|CRZ1_YEAST Transcriptional regulator CRZ1 OS=Saccharomyces cerevisiae
Align length 79
Score (bit) 33.1
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958855|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_B21, 5'
         (595 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53968|CRZ1_YEAST Transcriptional regulator CRZ1 OS=Saccharom...    33   1.1  
sp|Q29KL8|LRC50_DROPS Leucine-rich repeat-containing protein 50 ...    31   4.1  
sp|B4GT53|LRC50_DROPE Leucine-rich repeat-containing protein 50 ...    31   4.1  
sp|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase OS=P...    31   5.4  
sp|Q5GA86|VGLG_TAVCV Glycoprotein G OS=Taro vein chlorosis virus...    30   7.0  
sp|Q92805|GOGA1_HUMAN Golgin subfamily A member 1 OS=Homo sapien...    30   7.1  
sp|P33145|CADHK_CHICK B-cadherin (Fragment) OS=Gallus gallus GN=...    30   7.1  
sp|P36106|BYE1_YEAST Transcription factor BYE1 OS=Saccharomyces ...    30   7.1  

>sp|P53968|CRZ1_YEAST Transcriptional regulator CRZ1
           OS=Saccharomyces cerevisiae GN=CRZ1 PE=1 SV=1
          Length = 678

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
 Frame = +2

Query: 176 KNVDTGMMSKANNDMLGELLSDVKNKKNMDERYAASLQGKILTGPPNALFERRERTSWRP 355
           +N D G  S   ND L +L S   N+KN    +A  + GK  T P N     R  T+ RP
Sbjct: 538 ENNDNGTFSVKKNDNLEKLDSVTNNRKN-PANFACDVCGKKFTRPYNLKSHLRTHTNERP 596

Query: 356 L------PEQADDHENKGH 394
                     A  H+ K H
Sbjct: 597 FICSICGKAFARQHDRKRH 615


>sp|Q29KL8|LRC50_DROPS Leucine-rich repeat-containing protein 50
            homolog OS=Drosophila pseudoobscura pseudoobscura GN=dtr
            PE=3 SV=2
          Length = 1582

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +2

Query: 116  GHATMYLTSYNEHRLRERLSKNVDTGMMSKANNDML----GELLSDVKNKKNMDERYAAS 283
            G   + LTS     L+E LS N D     K+N+D L     ELL+ +  +    E  A  
Sbjct: 1054 GSTELQLTSEENEMLQEMLSSNEDLEAKHKSNDDPLVERDNELLNKMMQRMKEHEERARE 1113

Query: 284  LQGKI 298
            LQ ++
Sbjct: 1114 LQEQL 1118


>sp|B4GT53|LRC50_DROPE Leucine-rich repeat-containing protein 50
            homolog OS=Drosophila persimilis GN=dtr PE=3 SV=1
          Length = 1501

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +2

Query: 116  GHATMYLTSYNEHRLRERLSKNVDTGMMSKANNDML----GELLSDVKNKKNMDERYAAS 283
            G   + LTS     L+E LS N D     K+N+D L     ELL+ +  +    E  A  
Sbjct: 1003 GSTELQLTSEENEMLQEMLSSNEDLEAKHKSNDDPLVERDNELLNKMMQRMKEHEERARE 1062

Query: 284  LQGKI 298
            LQ ++
Sbjct: 1063 LQEQL 1067


>sp|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase
           OS=Pisum sativum GN=FT1 PE=2 SV=1
          Length = 565

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +2

Query: 209 NNDMLGELLSDVKNKKNMDERYAASLQGKILTGPPNALFERRER 340
           N+ +LG LL+D  ++K+   RY +++ GK L+G P++    R R
Sbjct: 99  NDKLLGGLLADGFDEKSCLSRYQSAIFGKGLSGKPSSYLISRLR 142


>sp|Q5GA86|VGLG_TAVCV Glycoprotein G OS=Taro vein chlorosis virus
           GN=G PE=3 SV=1
          Length = 588

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 12/100 (12%)
 Frame = +3

Query: 48  HAKHPRLSS*PLAPCAWVGPWL-------WDTLPCTSRPTMNTACVSVSPRMWTQG*CPR 206
           H+ HP +   P      VGPWL       +  +PC S P +                   
Sbjct: 339 HSDHPLVIETP------VGPWLPASKGGEFVVIPCQSEPNLVVMT--------------- 377

Query: 207 PIMICLANFLVMLRTKKT-----WMRDMLHHYKERY*LVH 311
           PI  CL+ FL+ +++ KT     WM    H   +R  L H
Sbjct: 378 PIETCLSPFLIKVKSLKTGEVYWWMPTESHVSPDRQCLGH 417


>sp|Q92805|GOGA1_HUMAN Golgin subfamily A member 1 OS=Homo sapiens
           GN=GOLGA1 PE=1 SV=2
          Length = 767

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +2

Query: 182 VDTGMMSKANNDMLGELLSDVKNKKNMDERYAA---SLQGKILTGPPNALFERRERTSWR 352
           +D   + K   D+  +LL   K  K M +R      +LQ ++   P N LFE RE    +
Sbjct: 614 MDLTQLQKEKQDLEQQLLEKNKTIKQMQQRMLELRKTLQKELKIRPDNELFEVRE----K 669

Query: 353 PLPEQAD 373
           P PE A+
Sbjct: 670 PGPEMAN 676


>sp|P33145|CADHK_CHICK B-cadherin (Fragment) OS=Gallus gallus
           GN=K-CAM PE=2 SV=1
          Length = 732

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 233 LSDVKNKKNMDERYAASLQGKILTGPPNALFERRERTSWRPLPEQAD-DHENKGH 394
           L  +K+ ++ + +   S+ G+    PP  +F   + T W  + +  D +H NK H
Sbjct: 27  LVQIKSNRDREAKIFYSITGQGADAPPEGIFTIEKETGWMKVTQPLDREHINKYH 81


>sp|P36106|BYE1_YEAST Transcription factor BYE1 OS=Saccharomyces
           cerevisiae GN=BYE1 PE=1 SV=1
          Length = 594

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = +2

Query: 152 HRLRERLSK---NVDTGMMSKANNDMLGELLSDVKNKKNMDERYAASLQGKI 298
           H L E L K   NV+ G + K   + +  L S++K+KKN+ E  A  ++GK+
Sbjct: 280 HNLEEELYKACLNVEFGTLDKIYTEKVRSLYSNLKDKKNL-ELKAHVVEGKL 330
tr_hit_id A9TNZ3
Definition tr|A9TNZ3|A9TNZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 108
Score (bit) 95.9
E-value 2.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958855|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_B21, 5'
         (595 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TNZ3|A9TNZ3_PHYPA Predicted protein OS=Physcomitrella paten...    96   2e-18
tr|A9NKS4|A9NKS4_PICSI Putative uncharacterized protein OS=Picea...    92   2e-17
tr|Q9SAK9|Q9SAK9_ARATH T8K14.19 protein (Putative uncharacterize...    91   5e-17
tr|A7QML3|A7QML3_VITVI Chromosome chr19 scaffold_126, whole geno...    82   3e-14
tr|Q6K6Q8|Q6K6Q8_ORYSJ cDNA, clone: J080087H24, full insert sequ...    78   4e-13
tr|A9PG86|A9PG86_POPTR Putative uncharacterized protein OS=Popul...    78   4e-13
tr|B4FJ69|B4FJ69_MAIZE Putative uncharacterized protein OS=Zea m...    76   1e-12
tr|Q0E136|Q0E136_ORYSJ Os02g0495900 protein OS=Oryza sativa subs...    66   1e-09
tr|A2X513|A2X513_ORYSI Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|Q4DGU6|Q4DGU6_TRYCR Translation elongation factor EF-2, putat...    34   7.2  
tr|A9T534|A9T534_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.5  

>tr|A9TNZ3|A9TNZ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_148381 PE=4 SV=1
          Length = 150

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 48/108 (44%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   SFLYEKSSTWRWIVASCKASQTFFLTFSALCVGGSVALGHATMYLTSYNEHRLRERLSKN 181
           S+L+EKS TWRW+V + K ++ FF  F+ LC  GS ALG A M  T+ ++  L E L + 
Sbjct: 2   SWLWEKSGTWRWVVMNSKYNKGFFFAFTTLCFMGSWALGEAVMRTTNMSQISLDEELRRR 61

Query: 182 V--DTGMMSKANNDMLGELLSDVKNKKNMDERYAASLQGKILTGPPNA 319
              D+ M+ + N D L +LL +V+ K+N ++RYAA+L+G+ LTG P A
Sbjct: 62  ARPDSMMVGQVNKDRLRQLLEEVQRKENTEDRYAAALRGETLTGTPGA 109


>tr|A9NKS4|A9NKS4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 135

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   SFLYEKSSTWRWIVASCKASQTFFLTFSALCVGGSVALGHATMYLTSYNEHRLRERLSKN 181
           +F+YEKS+TWRWIV SC+ S+ FF TF+ +C      +G+  M  T+ +  +L+  L KN
Sbjct: 2   AFMYEKSATWRWIVRSCRDSKQFFYTFATICGVIPGVIGYGVMQFTNTSSEKLQADLRKN 61

Query: 182 V--DTGMMSKANNDMLGELLSDVKNKKNMDERYAASLQGKILTGPP 313
              D+ MM K N + L E L +++ K+N ++RY A+L+G+ LT  P
Sbjct: 62  ASEDSLMMGKVNKERLAEFLGELQRKENTEDRYVAALRGETLTRNP 107


>tr|Q9SAK9|Q9SAK9_ARATH T8K14.19 protein (Putative uncharacterized
           protein At1g79390) (At1g79390) OS=Arabidopsis thaliana
           GN=At1g79390/T8K14_19 PE=2 SV=1
          Length = 126

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   SFLYEKSSTWRWIVASCKASQTFFLTFSALCVGGSVALGHATMYLTSYNEHRLRERLSKN 181
           SF+YEKS+TWRW+V   + S++FF TF+ALC      +G+  M +T+ +   L  RL K+
Sbjct: 2   SFMYEKSNTWRWLVMKTRDSRSFFFTFAALCGVIPGVIGYGVMQVTNSSNPELEARLRKS 61

Query: 182 V--DTGMMSKANNDMLGELLSDVKNKKNMDERYAASLQGKILTGPP 313
              DT MM K N + L E L ++K K++ ++RY A+L+G+ LT  P
Sbjct: 62  ARPDTLMMGKVNQERLAEYLGELKQKQDTNDRYVAALRGETLTRKP 107


>tr|A7QML3|A7QML3_VITVI Chromosome chr19 scaffold_126, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002111001
           PE=4 SV=1
          Length = 127

 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
 Frame = +2

Query: 2   SFLYEKSSTWRWIVASCKASQTFFLTFSALCVGGSVALGHATMYLTSYNEHRLRERLSKN 181
           S L+EKS TWRWIV   + S+ FFL F+ +C      +G+  M  T+     L  +L  N
Sbjct: 2   SVLWEKSETWRWIVRKSRDSKPFFLAFATICGVVPGVIGYCVMQFTNSRNPELEAQLRSN 61

Query: 182 V--DTGMMSKANNDMLGELLSDVKNKKNMDERYAASLQGKILTGPPNALFERRERTSWRP 355
              D+ MM K N + L E L +++ K++ ++RY A+L+G+ LT  P   +ER +     P
Sbjct: 62  ARPDSLMMGKVNQERLAEFLGELQRKEDTNDRYVAALRGETLTRKP---YERIQ-----P 113

Query: 356 LPEQAD 373
           +P+Q++
Sbjct: 114 IPKQSN 119


>tr|Q6K6Q8|Q6K6Q8_ORYSJ cDNA, clone: J080087H24, full insert
           sequence OS=Oryza sativa subsp. japonica GN=P0040H05.31
           PE=2 SV=1
          Length = 137

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   SFLYEKSSTWRWIVASCKASQTFFLTFSALCVGGSVALGHATMYLTSYNEHRLRERLSKN 181
           S L+EKS+ WRW+V   + S+ FF TF+ALC      +G+  M LTS    +L   L   
Sbjct: 2   SILWEKSAGWRWLVRRTRDSKPFFFTFAALCGVVPGVVGYGVMQLTSSRNDQLEAHLRST 61

Query: 182 V--DTGMMSKANNDMLGELLSDVKNKKNMDERYAASLQGKILT 304
              +T MM + N + L E L +++ K++ ++RY A+L+G+ LT
Sbjct: 62  ARPETAMMGQVNRERLAEFLGELQRKEDTNDRYVAALKGETLT 104


>tr|A9PG86|A9PG86_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 133

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
 Frame = +2

Query: 2   SFLYEKSSTWRWIVASCKASQTFFLTFSALCVGGSVALGHATMYLTSYNEHRLRERLSKN 181
           S L+EKS  WRWIV   + S+ FF  F+ +C      +G+  M  T+     L  RL +N
Sbjct: 2   SILWEKSEAWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYFVMQTTNSRNPELEARLRQN 61

Query: 182 V--DTGMMSKANNDMLGELLSDVKNKKNMDERYAASLQGKILTGPPNALFERRERTSWRP 355
              D+ MM K N + L E L +++ K++ ++RY A+L+G+ LT  P+   +   +     
Sbjct: 62  ARPDSLMMGKVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRNPHLRIQPIPKLDNTQ 121

Query: 356 LPEQADDHENK 388
             EQ  D++ K
Sbjct: 122 ADEQKLDNKQK 132


>tr|B4FJ69|B4FJ69_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 138

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   SFLYEKSSTWRWIVASCKASQTFFLTFSALCVGGSVALGHATMYLTSYNEHRLRERLSKN 181
           S L+EKS+ WRW+V   + S+ FF TF+ALC      +G+  M LT     +L   L   
Sbjct: 2   SILWEKSAGWRWLVRRTRDSKPFFFTFAALCGVVPGVIGYGVMQLTGSRNEQLEAHLRST 61

Query: 182 V--DTGMMSKANNDMLGELLSDVKNKKNMDERYAASLQGKILT 304
              +T MM + N + L E L +++ K++ ++RY A+L+G+ LT
Sbjct: 62  ARPETTMMGQVNRERLAEFLGELQRKEDTNDRYVAALRGETLT 104


>tr|Q0E136|Q0E136_ORYSJ Os02g0495900 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0495900 PE=4 SV=1
          Length = 158

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 23/124 (18%)
 Frame = +2

Query: 2   SFLYEKSSTWRWIVASCKASQTFFLTFSALCVGGSVALGHATMYLTSYNEHRLRERL--- 172
           S L+EKS+ WRW+V   + S+ FF TF+ALC      +G+  M LTS    +L   L   
Sbjct: 2   SILWEKSAGWRWLVRRTRDSKPFFFTFAALCGVVPGVVGYGVMQLTSSRNDQLEAHLRST 61

Query: 173 --------------SKNVD------TGMMSKANNDMLGELLSDVKNKKNMDERYAASLQG 292
                         + N D        MM + N + L E L +++ K++ ++RY A+L+G
Sbjct: 62  ARPETALKSGKSLFAVNADYQPYELPKMMGQVNRERLAEFLGELQRKEDTNDRYVAALKG 121

Query: 293 KILT 304
           + LT
Sbjct: 122 ETLT 125


>tr|A2X513|A2X513_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07286 PE=4 SV=1
          Length = 158

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 23/124 (18%)
 Frame = +2

Query: 2   SFLYEKSSTWRWIVASCKASQTFFLTFSALCVGGSVALGHATMYLTSYNEHRLRERL--- 172
           S L+EKS+ WRW+V   + S+ FF TF+ALC      +G+  M LTS    +L   L   
Sbjct: 2   SILWEKSAGWRWLVRRTRDSKPFFFTFAALCGVVPGVVGYGVMQLTSSRNDQLEAHLRST 61

Query: 173 --------------SKNVD------TGMMSKANNDMLGELLSDVKNKKNMDERYAASLQG 292
                         + N D        MM + N + L E L +++ K++ ++RY A+L+G
Sbjct: 62  ARPETALKSGKSLFAVNADYQPYELPKMMGQVNRERLAEFLGELQRKEDTNDRYVAALKG 121

Query: 293 KILT 304
           + LT
Sbjct: 122 ETLT 125


>tr|Q4DGU6|Q4DGU6_TRYCR Translation elongation factor EF-2, putative
           OS=Trypanosoma cruzi GN=Tc00.1047053507081.30 PE=4 SV=1
          Length = 890

 Score = 33.9 bits (76), Expect = 7.2
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
 Frame = -3

Query: 476 PFRPI-----SIYLASMKPRQPKGHAKLMKEFNVLYFRDHQLVQVAVSMMFSHGVQT 321
           PF+P+     SI  AS+ P+ PK H +L+K   +LY  D Q V+V++     H + T
Sbjct: 489 PFKPLVLQSTSILRASVYPKDPKDHLQLVKGLRLLYRVDPQ-VEVSILPTGEHVIGT 544