| DK958863 |
| Clone id |
TST39A01NGRL0003_C05 |
| Library |
TST39 |
| Length |
693 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_C05. 5' end sequence. |
| Accession |
DK958863 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL1167Contig1 |
| Sequence |
GTGAGAAGCGCGCAAGCAGAGAAGTGGCTATGGCGCTACTCAACTCGAAGATCGTGGGTC ATCACGTGAATGCTCCTTGCTTTAAGTACTTGCATGCGGAACAACCAGCCATCACGAAGC AGACTGTGGGTTTCACGCCGATGCCTCTTTTTGCCCTGCGCAGAAACAGAGCATGCCCCT CGAAGCTCATCTGCTCTGTTCATGAAGGCGCCCTTCCTGTTGCTTCTACCTCTCCCTTGC CCGCCAGCAATGTGCAAGGAACCTCTTACAGCCCTCCTTCTTCTGCCGTGCAATATGCGG AGGAGTTCATTGAGAAGACTATATTCAATTGCAGATTTCTTACCCTGATGGGAGTTGTGG GCTCCCTTACTGGTTCTGTCTTATGCTTCCTTAAGGGATGTTCCTTTGTGGTGGAGTCAT TCAGAGAGTATTTTTTGACTTGCTTGCATGGCGTTGGCACGGGGAAGGTCATCCTGCTAC TTGTGGAAGCAGTAGATGTATATCTCATGGGGACTGTCATGCTCATTTTTGGAATGGGAC TTTATGAGCTTTTCATAAGCACCTTGGATGTGCCGGGTGGTAATTGCGCCTCTGGGGGCT CAAGAACGACGGTTTGTGGGTCGAATTTATTTGGCCTTTTCCGATTGAGGGAGAGGCCCA AATGGTTAGAAATTCGCTCCTTAGATGAACTGA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9ZEZ0 |
| Definition |
sp|Q9ZEZ0|YREP_BUCAI UPF0114 protein in repA1-repA2 intergenic region OS=Buchnera aphidicola subsp. Acyrthosiphon pisum |
| Align length |
91 |
| Score (bit) |
38.9 |
| E-value |
0.026 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9NWL7 |
| Definition |
tr|A9NWL7|A9NWL7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
131 |
| Score (bit) |
204.0 |
| E-value |
3.0e-51 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958863|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_C05, 5' (693 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NWL7|A9NWL7_PICSI Putative uncharacterized protein OS=Picea... 204 3e-51 tr|A9TW38|A9TW38_PHYPA Predicted protein OS=Physcomitrella paten... 184 6e-45 tr|A9NPX7|A9NPX7_PICSI Putative uncharacterized protein OS=Picea... 173 8e-42 tr|Q94JM4|Q94JM4_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thalia... 154 4e-36 tr|A7Q232|A7Q232_VITVI Chromosome chr13 scaffold_45, whole genom... 153 1e-35 tr|Q940D6|Q940D6_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thalia... 151 4e-35 tr|B6SKX4|B6SKX4_MAIZE Uncharacterized protein UPF0114 OS=Zea ma... 147 5e-34 tr|Q8H3C6|Q8H3C6_ORYSJ Os07g0656700 protein OS=Oryza sativa subs... 147 8e-34 tr|A2YPH6|A2YPH6_ORYSI Putative uncharacterized protein OS=Oryza... 147 8e-34 tr|B4FCT5|B4FCT5_MAIZE Putative uncharacterized protein OS=Zea m... 146 1e-33 tr|A7QKN2|A7QKN2_VITVI Chromosome chr2 scaffold_113, whole genom... 145 2e-33 tr|Q5Z9G6|Q5Z9G6_ORYSJ Os06g0710300 protein OS=Oryza sativa subs... 142 3e-32 tr|A3BFA7|A3BFA7_ORYSJ Putative uncharacterized protein OS=Oryza... 142 3e-32 tr|A2YGW0|A2YGW0_ORYSI Putative uncharacterized protein OS=Oryza... 142 3e-32 tr|B8B5E4|B8B5E4_ORYSI Putative uncharacterized protein OS=Oryza... 140 6e-32 tr|Q9FNA1|Q9FNA1_ARATH Genomic DNA, chromosome 5, P1 clone:MSH12... 140 8e-32 tr|Q8L645|Q8L645_ARATH Putative uncharacterized protein At5g1372... 140 8e-32 tr|A5AN14|A5AN14_VITVI Putative uncharacterized protein OS=Vitis... 140 1e-31 tr|A9RFF8|A9RFF8_PHYPA Predicted protein OS=Physcomitrella paten... 139 2e-31 tr|Q7EYX5|Q7EYX5_ORYSJ Os07g0656600 protein OS=Oryza sativa subs... 134 4e-30 tr|A9TX04|A9TX04_PHYPA Predicted protein (Fragment) OS=Physcomit... 134 5e-30 tr|B4FTW2|B4FTW2_MAIZE Putative uncharacterized protein OS=Zea m... 129 2e-28 tr|B6U4B2|B6U4B2_MAIZE Uncharacterized protein UPF0114 OS=Zea ma... 128 3e-28 tr|O65710|O65710_ARATH Putative uncharacterized protein AT4g1939... 120 1e-25 tr|A7NTK8|A7NTK8_VITVI Chromosome chr18 scaffold_1, whole genome... 115 2e-24 tr|A3BMZ9|A3BMZ9_ORYSJ Putative uncharacterized protein OS=Oryza... 109 2e-22 tr|Q7Y1G8|Q7Y1G8_ORYSJ Os03g0739700 protein OS=Oryza sativa subs... 86 2e-15 tr|A2XLU1|A2XLU1_ORYSI Putative uncharacterized protein OS=Oryza... 86 2e-15 tr|A5BP12|A5BP12_VITVI Putative uncharacterized protein OS=Vitis... 76 2e-12 tr|B1NY88|B1NY88_ORYSJ Putative uncharacterized protein OS=Oryza... 71 7e-11
>tr|A9NWL7|A9NWL7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 204 bits (520), Expect = 3e-51 Identities = 99/131 (75%), Positives = 114/131 (87%) Frame = +3
Query: 300 EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILL 479 EEFIEK IFNCRFLTLM V GSL GS+LCFLKGC+FV +SF+EYF + ++ G+GKVILL Sbjct: 129 EEFIEKAIFNCRFLTLMAVAGSLAGSMLCFLKGCAFVFDSFKEYFQSYIYHHGSGKVILL 188
Query: 480 LVEAVDVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSRTTVCGSNLFGLFRLRERP 659 LVEAVDVYLMGTVMLIFGMGLYELF+++L++P N SR TVCGSNLFGLFRL+ERP Sbjct: 189 LVEAVDVYLMGTVMLIFGMGLYELFVNSLEIPDRNSTQQTSRATVCGSNLFGLFRLQERP 248
Query: 660 KWLEIRSLDEL 692 KWLEI+SLDEL Sbjct: 249 KWLEIQSLDEL 259
>tr|A9TW38|A9TW38_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172311 PE=4 SV=1 Length = 475
Score = 184 bits (466), Expect = 6e-45 Identities = 92/131 (70%), Positives = 101/131 (77%) Frame = +3
Query: 300 EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILL 479 E IE+ IFNCRF TLM VVGSL GSVLCFLKG FV +SF EYF G+ T KV+ L Sbjct: 288 EAIIERVIFNCRFFTLMAVVGSLVGSVLCFLKGTLFVTQSFVEYFQAAWQGLSTSKVVFL 347
Query: 480 LVEAVDVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSRTTVCGSNLFGLFRLRERP 659 LVEAVDVYLMGTVMLIFGMGLYELF+ TL+V G C R CGSNLFGLF+++ERP Sbjct: 348 LVEAVDVYLMGTVMLIFGMGLYELFVDTLEVSGAECEE--VREPACGSNLFGLFQMKERP 405
Query: 660 KWLEIRSLDEL 692 KWLEIRSLDEL Sbjct: 406 KWLEIRSLDEL 416
>tr|A9NPX7|A9NPX7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 296
Score = 173 bits (439), Expect = 8e-42 Identities = 99/159 (62%), Positives = 114/159 (71%), Gaps = 3/159 (1%) Frame = +3
Query: 225 STSPLPASNVQGTSYSPPSSAVQYA---EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLK 395 S+S +S G + +PP + EE IE IFNCRF TLM V GSL GSVLCFLK Sbjct: 84 SSSSETSSVGSGGTLAPPIILPEQPLSLEERIEMIIFNCRFFTLMAVAGSLAGSVLCFLK 143
Query: 396 GCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTLDVP 575 G +V ESFR ++ LH TGKVILLLVEA+DVYLMGTVMLIFGMGLY LFIS+LDV Sbjct: 144 GGVYVFESFRAWYSCFLHQHATGKVILLLVEALDVYLMGTVMLIFGMGLYGLFISSLDVS 203
Query: 576 GGNCASGGSRTTVCGSNLFGLFRLRERPKWLEIRSLDEL 692 N S S TV GSNLFGLF+L+ERPKWL+I+SL+EL Sbjct: 204 AENSGSDDS-GTVFGSNLFGLFKLQERPKWLKIQSLEEL 241
>tr|Q94JM4|Q94JM4_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thaliana GN=At4g19390 PE=2 SV=1 Length = 273
Score = 154 bits (390), Expect = 4e-36 Identities = 84/165 (50%), Positives = 111/165 (67%), Gaps = 3/165 (1%) Frame = +3
Query: 207 GALPVASTSPLPASNVQGTSYSPPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLC 386 G L ASTS +++ S ++ + EE IEK I++CRF+T +G +GSL GSVLC Sbjct: 67 GRLASASTSTSASTSTSAAVTSNSTNRFEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLC 126
Query: 387 FLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTL 566 F+KGC +VV+SF +Y V GKVI LLVEA+D+YL+GTVML+FG+GLYELFIS L Sbjct: 127 FIKGCMYVVDSFLQY------SVNRGKVIFLLVEAIDIYLLGTVMLVFGLGLYELFISNL 180
Query: 567 DVPGGNCASGGSRTTVCGSN---LFGLFRLRERPKWLEIRSLDEL 692 D + SRT SN LFG+F L+ERP+WLE++S+ EL Sbjct: 181 D-------TSESRTHDIVSNRSSLFGMFTLKERPQWLEVKSVSEL 218
>tr|A7Q232|A7Q232_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028719001 PE=4 SV=1 Length = 322
Score = 153 bits (386), Expect = 1e-35 Identities = 86/178 (48%), Positives = 120/178 (67%), Gaps = 6/178 (3%) Frame = +3
Query: 177 PSKLICSVHEGALP-VASTSPLPASN---VQGTSYSPPSSAVQYAEEFIEKTIFNCRFLT 344 P++ I S + + P V S+ PL ++ + SP V+Y+E IE+ IF+ RFL Sbjct: 96 PTETILSSNPPSKPLVESSRPLNSTYNYALPDPKASPIVRFVRYSESSIERVIFDFRFLA 155
Query: 345 LMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVML 524 L+ V GSL GS+LCFL GC ++V++++ Y+ +C+ G+ TGK++L LVEA+DVYL GTVML Sbjct: 156 LLAVGGSLAGSLLCFLNGCVYIVDAYKVYWTSCVKGIHTGKMVLRLVEAIDVYLAGTVML 215
Query: 525 IFGMGLYELFISTL--DVPGGNCASGGSRTTVCGSNLFGLFRLRERPKWLEIRSLDEL 692 IFGMGLY LFIS + DVP + GS+LFG+F L+ERPKW++I SLDEL Sbjct: 216 IFGMGLYGLFISNVPPDVP------PSVDRALKGSSLFGMFALKERPKWMKISSLDEL 267
>tr|Q940D6|Q940D6_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thaliana PE=2 SV=1 Length = 273
Score = 151 bits (381), Expect = 4e-35 Identities = 83/165 (50%), Positives = 110/165 (66%), Gaps = 3/165 (1%) Frame = +3
Query: 207 GALPVASTSPLPASNVQGTSYSPPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLC 386 G L ASTS +++ S ++ + EE IEK I++CRF+T +G +GSL GSVLC Sbjct: 67 GRLASASTSTSASTSTSAAVTSNSTNRFEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLC 126
Query: 387 FLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTL 566 F+KGC +VV+SF +Y V GKVI LLVEA+D+YL+GTVML+FG+ LYELFIS L Sbjct: 127 FIKGCMYVVDSFLQY------SVNRGKVIFLLVEAIDIYLLGTVMLVFGLVLYELFISNL 180
Query: 567 DVPGGNCASGGSRTTVCGSN---LFGLFRLRERPKWLEIRSLDEL 692 D + SRT SN LFG+F L+ERP+WLE++S+ EL Sbjct: 181 D-------TSESRTHDIVSNRSSLFGMFTLKERPQWLEVKSVSEL 218
>tr|B6SKX4|B6SKX4_MAIZE Uncharacterized protein UPF0114 OS=Zea mays PE=2 SV=1 Length = 266
Score = 147 bits (372), Expect = 5e-34 Identities = 88/203 (43%), Positives = 118/203 (58%), Gaps = 4/203 (1%) Frame = +3
Query: 96 AEQPAITKQTVGFTPMPLFALRRNRACPSKLICSVHEGALPVASTSPLPASNV---QGTS 266 A PA+ G +P RR + S G + +S V G + Sbjct: 10 AAPPAVHAAPAGSRLLPPALPRRRLVAVASSASSAPSGEVASSSQDGRGYGTVGGPNGHA 69
Query: 267 YSPPSSAVQYA-EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTC 443 +P + A E +E+ IF+ RFL L+ V GSL GSVLCFL GC F+ E+++ Y+ +C Sbjct: 70 IAPATDTKSTAVETTVERVIFDFRFLALLAVAGSLAGSVLCFLNGCVFIKEAYQVYWSSC 129
Query: 444 LHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSRTTVCGS 623 + GV TG+++L +VEA+DVYL GTVMLIFGMGLY LFIS + P G S + GS Sbjct: 130 VKGVHTGQMVLKVVEAIDVYLAGTVMLIFGMGLYGLFIS--NAPAG--VPPESDRALSGS 185
Query: 624 NLFGLFRLRERPKWLEIRSLDEL 692 +LFG+F L+ERPKW+ I SLDEL Sbjct: 186 SLFGMFALKERPKWMNITSLDEL 208
>tr|Q8H3C6|Q8H3C6_ORYSJ Os07g0656700 protein OS=Oryza sativa subsp. japonica GN=P0047B07.113 PE=2 SV=1 Length = 286
Score = 147 bits (370), Expect = 8e-34 Identities = 76/142 (53%), Positives = 100/142 (70%), Gaps = 2/142 (1%) Frame = +3
Query: 273 PPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHG 452 PP++ E +E+ IF+ RFL L+ V GSL GS+LCFL GC ++ E++ Y+ CL G Sbjct: 87 PPTTKSTAVETTVERVIFDFRFLALLAVAGSLAGSLLCFLNGCVYIKEAYSVYWSGCLKG 146
Query: 453 VGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFIS--TLDVPGGNCASGGSRTTVCGSN 626 V TG+++L +VEA+DVYL GTVMLIFGMGLY LFIS + DVP S + GS+ Sbjct: 147 VHTGQMVLKVVEAIDVYLAGTVMLIFGMGLYGLFISNTSTDVP------SESDRALQGSS 200
Query: 627 LFGLFRLRERPKWLEIRSLDEL 692 LFG+F L+ERPKW++I SLDEL Sbjct: 201 LFGMFALKERPKWMKITSLDEL 222
>tr|A2YPH6|A2YPH6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27168 PE=4 SV=1 Length = 286
Score = 147 bits (370), Expect = 8e-34 Identities = 76/142 (53%), Positives = 100/142 (70%), Gaps = 2/142 (1%) Frame = +3
Query: 273 PPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHG 452 PP++ E +E+ IF+ RFL L+ V GSL GS+LCFL GC ++ E++ Y+ CL G Sbjct: 87 PPTTKSTAVETTVERVIFDFRFLALLAVAGSLAGSLLCFLNGCVYIKEAYSVYWSGCLKG 146
Query: 453 VGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFIS--TLDVPGGNCASGGSRTTVCGSN 626 V TG+++L +VEA+DVYL GTVMLIFGMGLY LFIS + DVP S + GS+ Sbjct: 147 VHTGQMVLKVVEAIDVYLAGTVMLIFGMGLYGLFISNTSTDVP------SESDRALQGSS 200
Query: 627 LFGLFRLRERPKWLEIRSLDEL 692 LFG+F L+ERPKW++I SLDEL Sbjct: 201 LFGMFALKERPKWMKITSLDEL 222
>tr|B4FCT5|B4FCT5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 266
Score = 146 bits (369), Expect = 1e-33 Identities = 84/186 (45%), Positives = 114/186 (61%), Gaps = 12/186 (6%) Frame = +3
Query: 171 ACPSKLICSVHEGALPVASTSPLPASNVQGTSYS----PPSSAVQYA--------EEFIE 314 A P + + +V A P A + + +S+ G Y P A+ A E +E Sbjct: 28 ALPRRRLVAVASSASP-APSGEVASSSQDGRGYGTVGGPNGHAIAPATVTKSTAVETTVE 86
Query: 315 KTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAV 494 + IF+ RFL L+ V GSL GSVLCFL GC F+ E+++ Y+ +C+ GV TG+++L +VEA+ Sbjct: 87 RVIFDFRFLALLAVAGSLAGSVLCFLNGCVFIKEAYQVYWSSCVKGVHTGQMVLKVVEAI 146
Query: 495 DVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSRTTVCGSNLFGLFRLRERPKWLEI 674 DVYL GTVMLIFGMGLY LFIS + S + GS+LFG+F L+ERPKW+ I Sbjct: 147 DVYLAGTVMLIFGMGLYGLFISNAPA----SVAPESDRALSGSSLFGMFALKERPKWMNI 202
Query: 675 RSLDEL 692 SLDEL Sbjct: 203 TSLDEL 208
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