Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958869|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_C11, 5' (476 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 196 4e-50 sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 182 9e-46 sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl... 84 3e-16 sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl... 83 7e-16 sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 71 2e-12 sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl... 69 1e-11 sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragmen... 66 9e-11 sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 66 9e-11 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 66 9e-11 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 66 9e-11 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 66 9e-11 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 65 2e-10 sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 65 2e-10 sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 65 2e-10 sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chlorop... 65 2e-10 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 65 2e-10 sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chlorop... 65 2e-10 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 65 2e-10 sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 65 2e-10 sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 65 2e-10 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 65 2e-10 sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 64 3e-10 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 64 3e-10 sp|P14277|CB2F_SOLLC Chlorophyll a-b binding protein 3B, chlorop... 64 3e-10 sp|P14276|CB2E_SOLLC Chlorophyll a-b binding protein 3A, chlorop... 64 3e-10 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 64 3e-10 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 64 3e-10 sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 64 3e-10 sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 64 3e-10 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 64 3e-10
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1 Length = 245
Score = 196 bits (498), Expect = 4e-50 Identities = 93/141 (65%), Positives = 102/141 (72%) Frame = +2
Query: 2 LLPEALGLGNWVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKD 181 L+PEALGLGNWV AQ+WAA P GQATYLGNPVPWGNLP QR EKD Sbjct: 102 LVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKD 161
Query: 182 PEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENL 361 PEK+KYPGG FDPLGFSK+P NGRLA+LAFVGF VQ +A PGTGPLENL Sbjct: 162 PEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENL 221
Query: 362 FTHLADPWHKNIAEIVIPRSV 424 THLADPWH NI +IVIPR++ Sbjct: 222 ATHLADPWHNNIGDIVIPRNI 242
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1 Length = 246
Score = 182 bits (461), Expect = 9e-46 Identities = 85/141 (60%), Positives = 98/141 (69%) Frame = +2
Query: 2 LLPEALGLGNWVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKD 181 ++PEALGLGNWV AQ+WAA PGGQATYLG PVPWG LP QR+ EKD Sbjct: 103 IVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKD 162
Query: 182 PEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENL 361 EK+KYPGG FDPLG+SK+P NGRLALLA VGF VQ +A GTGPLENL Sbjct: 163 SEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENL 222
Query: 362 FTHLADPWHKNIAEIVIPRSV 424 THLADPWH NI +++IP+ + Sbjct: 223 ATHLADPWHNNIGDVIIPKGI 243
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=2 SV=1 Length = 290
Score = 84.0 bits (206), Expect = 3e-16 Identities = 52/125 (41%), Positives = 67/125 (53%), Gaps = 1/125 (0%) Frame = +2
Query: 32 WVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGP 211 W DA K G ++YLG P+P+ ++ QRN E D EKR YPGG Sbjct: 165 WQDAGKVELVDG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGK 221
Query: 212 F-DPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLADPWH 388 F DPLG + +P + RLA++AF+GF+VQAAA G GPL N THL+DP H Sbjct: 222 FFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLH 280
Query: 389 KNIAE 403 I + Sbjct: 281 TTIID 285
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1 Length = 287
Score = 82.8 bits (203), Expect = 7e-16 Identities = 51/125 (40%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Frame = +2
Query: 32 WVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGP 211 W DA K G ++YLG P+P+ ++ QRN E D EKR YPGG Sbjct: 162 WQDAGKVELVDG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGK 218
Query: 212 F-DPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLADPWH 388 F DPLG + +P + RLA++ F+GF+VQAAA G GPL N THL+DP H Sbjct: 219 FFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAA-TGKGPLNNWATHLSDPLH 277
Query: 389 KNIAE 403 I + Sbjct: 278 TTIID 282
>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1 Length = 280
Score = 71.2 bits (173), Expect = 2e-12 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = +2
Query: 179 DPEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLEN 358 D E + +PGGPFDPLG +K+P NGRLA+ A +GF +Q A + G GP+EN Sbjct: 195 DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQ-AYVTGEGPVEN 253
Query: 359 LFTHLADPWHKNIAEIV 409 L HL+DP+ N+ ++ Sbjct: 254 LAKHLSDPFGNNLLTVI 270
>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2 SV=1 Length = 276
Score = 68.9 bits (167), Expect = 1e-11 Identities = 47/119 (39%), Positives = 61/119 (51%) Frame = +2
Query: 11 EALGLGNWVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEK 190 EAL W DA K G ++YLG P+P+ +L QRN E DPEK Sbjct: 159 EALTGIAWQDAGKVELVEG--SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEK 215
Query: 191 RKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFT 367 R YPGG FDPLG + +P + RLA++AF+ F++Q AA G GP+ L T Sbjct: 216 RIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQ-AAFTGKGPVSFLAT 273
>sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1 Length = 116
Score = 65.9 bits (159), Expect = 9e-11 Identities = 38/91 (41%), Positives = 45/91 (49%) Frame = +2
Query: 197 YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLA 376 YPGG FDPLG +++P NGRLA+ + GF VQ A + G GPLENL HLA Sbjct: 40 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ-AIVTGKGPLENLADHLA 98
Query: 377 DPWHKNIAEIVIPRSVL*TV*RCLWSYETKF 469 DP + N WSY T F Sbjct: 99 DPVNNN-----------------AWSYATNF 112
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1 Length = 267
Score = 65.9 bits (159), Expect = 9e-11 Identities = 38/91 (41%), Positives = 45/91 (49%) Frame = +2
Query: 197 YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLA 376 YPGG FDPLG +++P NGRLA+ + GF VQ A + G GPLENL HLA Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQ-AIVTGKGPLENLADHLA 249
Query: 377 DPWHKNIAEIVIPRSVL*TV*RCLWSYETKF 469 DP + N WSY T F Sbjct: 250 DPVNNN-----------------AWSYATNF 263
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1 Length = 266
Score = 65.9 bits (159), Expect = 9e-11 Identities = 38/91 (41%), Positives = 45/91 (49%) Frame = +2
Query: 197 YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLA 376 YPGG FDPLG +++P NGRLA+ + GF VQ A + G GPLENL HLA Sbjct: 190 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ-ALVTGKGPLENLADHLA 248
Query: 377 DPWHKNIAEIVIPRSVL*TV*RCLWSYETKF 469 DP + N WSY T F Sbjct: 249 DPVNNN-----------------AWSYATNF 262
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1 Length = 267
Score = 65.9 bits (159), Expect = 9e-11 Identities = 38/91 (41%), Positives = 45/91 (49%) Frame = +2
Query: 197 YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLA 376 YPGG FDPLG +++P NGRLA+ + GF VQ A + G GPLENL HLA Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ-AIVTGKGPLENLADHLA 249
Query: 377 DPWHKNIAEIVIPRSVL*TV*RCLWSYETKF 469 DP + N WSY T F Sbjct: 250 DPVNNN-----------------AWSYATNF 263
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