DK958879 |
Clone id |
TST39A01NGRL0003_C21 |
Library |
TST39 |
Length |
648 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_C21. 5' end sequence. |
Accession |
DK958879 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1743Contig1 |
Sequence |
GAGAGATGGAGCCTCACGCCGAGGATCAGCATCAACATGAGGAGCACCAGCATCATTCCT ATGACCACCACCACCACCATGAGGAGGGGCACGAGCACCACCATCATTCCCATGACCACC ACCATGAGGACAGAAATGCTGATGGTTACTGGATTGGAAAAGATGGGAAGCATTACCATT CTCATGATGGATTGCCACCCCACACTCATGAACCTCTAGATTCACCAGGTTATTTCAGCA GGAGAGCACAACGGCTTGCAAATCGCGACTTCACAGAGAGAGCTTTCACTGTAGGCATTG GGGGGCCAGTTGGTAGTGGCAAAACAGCTTTGATGCTAGCTTTGTGTACTGCCTTGAGGG ACAAGTACAGTGTTGCTGCTGTAACAAATGATATTTTTACTCGAGAAGATGGTGAGTTTT TGGTGAAACATGGTGCACTTCCAGCGGAGAGAATAAAGGCAATTGAAACTGGGGGTTGTC CACATGCTGCTATTCGTGAAGATATCAGCATCAACCTTGGCCCATTGGAAGAGCTTTCAA GAAGCTTCTCAACTGATATTTTACTGTGTGAATCAGGAGGGGATAATCTCGCTGCCAATT TTAGTAGAGAGTTGGCCGATTACATAATTTATATTATTGATGTTGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A7HHN3 |
Definition |
sp|A7HHN3|UREG_ANADF Urease accessory protein ureG OS=Anaeromyxobacter sp. (strain Fw109-5) |
Align length |
157 |
Score (bit) |
199.0 |
E-value |
8.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958879|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_C21, 5' (648 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|A7HHN3|UREG_ANADF Urease accessory protein ureG OS=Anaeromyxo... 199 8e-51 sp|A9GP90|UREG_SORC5 Urease accessory protein ureG OS=Sorangium ... 197 3e-50 sp|Q11VN1|UREG_CYTH3 Urease accessory protein ureG OS=Cytophaga ... 178 2e-44 sp|A4FCP1|UREG2_SACEN Urease accessory protein ureG 2 OS=Sacchar... 162 1e-39 sp|B1W5H1|UREG1_STRGG Urease accessory protein ureG 1 OS=Strepto... 161 3e-39 sp|Q4ZMY9|UREG_PSEU2 Urease accessory protein ureG OS=Pseudomona... 160 5e-39 sp|Q48DC7|UREG_PSE14 Urease accessory protein ureG OS=Pseudomona... 160 5e-39 sp|A4VQW0|UREG_PSEU5 Urease accessory protein ureG OS=Pseudomona... 160 7e-39 sp|Q4KJ34|UREG_PSEF5 Urease accessory protein ureG OS=Pseudomona... 159 9e-39 sp|Q826R7|UREG_STRAW Urease accessory protein ureG OS=Streptomyc... 158 2e-38 sp|Q0AC95|UREG_ALHEH Urease accessory protein ureG OS=Alkalilimn... 158 2e-38 sp|B1M3X4|UREG1_METRJ Urease accessory protein ureG 1 OS=Methylo... 157 5e-38 sp|Q9HUS0|UREG_PSEAE Urease accessory protein ureG OS=Pseudomona... 156 8e-38 sp|Q8DMQ4|UREG_THEEB Urease accessory protein ureG OS=Thermosyne... 156 1e-37 sp|B0UBI3|UREG_METS4 Urease accessory protein ureG OS=Methylobac... 156 1e-37 sp|A8LRR5|UREG_DINSH Urease accessory protein ureG OS=Dinoroseob... 156 1e-37 sp|B1ZHN6|UREG1_METPB Urease accessory protein ureG 1 OS=Methylo... 155 2e-37 sp|Q1H0F5|UREG_METFK Urease accessory protein ureG OS=Methylobac... 154 3e-37 sp|B0V9P2|UREG_ACIBY Urease accessory protein ureG OS=Acinetobac... 154 4e-37 sp|A3M3F5|UREG_ACIBT Urease accessory protein ureG OS=Acinetobac... 154 4e-37 sp|B2HVS4|UREG_ACIBC Urease accessory protein ureG OS=Acinetobac... 154 4e-37 sp|A9W6X0|UREG1_METEP Urease accessory protein ureG 1 OS=Methylo... 154 4e-37 sp|Q6N223|UREG_RHOPA Urease accessory protein ureG OS=Rhodopseud... 153 7e-37 sp|Q88J00|UREG_PSEPK Urease accessory protein ureG OS=Pseudomona... 153 7e-37 sp|B0KUZ3|UREG_PSEPG Urease accessory protein ureG OS=Pseudomona... 153 7e-37 sp|A5W4B2|UREG_PSEP1 Urease accessory protein ureG OS=Pseudomona... 153 7e-37 sp|A8APV3|UREG_CITK8 Urease accessory protein ureG OS=Citrobacte... 153 8e-37 sp|Q1IBN6|UREG_PSEE4 Urease accessory protein ureG OS=Pseudomona... 152 1e-36 sp|A4WEJ8|UREG_ENT38 Urease accessory protein ureG OS=Enterobact... 152 1e-36 sp|Q07QT9|UREG_RHOP5 Urease accessory protein ureG OS=Rhodopseud... 152 2e-36
>sp|A7HHN3|UREG_ANADF Urease accessory protein ureG OS=Anaeromyxobacter sp. (strain Fw109-5) GN=ureG PE=3 SV=1 Length = 236
Score = 199 bits (507), Expect = 8e-51 Identities = 103/157 (65%), Positives = 117/157 (74%) Frame = +3
Query: 177 HSHDGLPPHTHEPLDSPGYFSRRAQRLANRDFTERAFTVGIGGPVGSGKTALMLALCTAL 356 H H H H PG F R A D RAFTVG+GGPVGSGKTAL+LALC AL Sbjct: 2 HDHSLHSGHDHGL--GPGSFHDRGAPHARGDLRRRAFTVGVGGPVGSGKTALVLALCRAL 59
Query: 357 RDKYSVAAVTNDIFTREDGEFLVKHGALPAERIKAIETGGCPHAAIREDISINLGPLEEL 536 RD S+ VTNDIFTRED EFLV++ ALPAERI+A+ETGGCPHAAIRED++ NL LEEL Sbjct: 60 RDSRSLGVVTNDIFTREDAEFLVRNDALPAERIRAVETGGCPHAAIREDVTANLLALEEL 119
Query: 537 SRSFSTDILLCESGGDNLAANFSRELADYIIYIIDVA 647 + + +IL CESGGDNLAA+FSRELADY IY+IDVA Sbjct: 120 TEAHRPEILFCESGGDNLAAHFSRELADYTIYVIDVA 156
>sp|A9GP90|UREG_SORC5 Urease accessory protein ureG OS=Sorangium cellulosum (strain So ce56) GN=ureG PE=3 SV=1 Length = 302
Score = 197 bits (502), Expect = 3e-50 Identities = 101/159 (63%), Positives = 120/159 (75%) Frame = +3
Query: 171 HYHSHDGLPPHTHEPLDSPGYFSRRAQRLANRDFTERAFTVGIGGPVGSGKTALMLALCT 350 H H+H+ HTHE PG FS R +RDF+ RAFTVGIGGPVGSGKTAL+LALC Sbjct: 62 HAHAHEHAHGHTHEHWAHPGLFSER-DAPKDRDFSARAFTVGIGGPVGSGKTALVLALCR 120
Query: 351 ALRDKYSVAAVTNDIFTREDGEFLVKHGALPAERIKAIETGGCPHAAIREDISINLGPLE 530 ALRD+ + VTNDIFT+ED EFL ++ ALP ERI+A+ETGGCPHAAIREDIS NL L+ Sbjct: 121 ALRDRMPLGVVTNDIFTQEDAEFLHRNKALPPERIRAVETGGCPHAAIREDISHNLVALD 180
Query: 531 ELSRSFSTDILLCESGGDNLAANFSRELADYIIYIIDVA 647 +L + +L+ ESGGDNLAA +SREL DY IY+IDVA Sbjct: 181 DLMDHVAPALLIVESGGDNLAAQYSRELVDYTIYVIDVA 219
>sp|Q11VN1|UREG_CYTH3 Urease accessory protein ureG OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ureG PE=3 SV=1 Length = 244
Score = 178 bits (452), Expect = 2e-44 Identities = 87/144 (60%), Positives = 111/144 (77%), Gaps = 1/144 (0%) Frame = +3
Query: 219 DSPGYFSRRAQRLANRDFTERAFTVGIGGPVGSGKTALMLALCTALRDKYSVAAVTNDIF 398 DSPG+F R R+F +RAFTVGIGGPVG+GKTA ++ +C ALRDK ++A VTNDIF Sbjct: 14 DSPGHFHHRELIHEKRNFKKRAFTVGIGGPVGTGKTAWLMQICKALRDKMNIAVVTNDIF 73
Query: 399 TREDGEFLVKHGALPAERIKAIETGGCPHAAIREDISINLGPLEELSRSF-STDILLCES 575 T ED EFL+++ AL +RI +ETGGCPHAAIRED+S N+ LEEL + F ++L ES Sbjct: 74 TSEDAEFLIRNEALSKDRIIGVETGGCPHAAIREDVSQNMYALEELMKRFPDVELLFVES 133
Query: 576 GGDNLAANFSRELADYIIYIIDVA 647 GGDNLAA+FS+EL DY +Y+IDV+ Sbjct: 134 GGDNLAAHFSKELVDYSVYVIDVS 157
>sp|A4FCP1|UREG2_SACEN Urease accessory protein ureG 2 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=ureG2 PE=3 SV=1 Length = 236
Score = 162 bits (410), Expect = 1e-39 Identities = 87/166 (52%), Positives = 108/166 (65%), Gaps = 1/166 (0%) Frame = +3
Query: 153 IGKDGKHYHSHDGLPPHTHEPLDSPGYFSRRAQRLANRDFTERAFTVGIGGPVGSGKTAL 332 IG H H H P +P+ G SRRA R +G+GGPVGSGKTA Sbjct: 7 IGNSVPHAHLHSAAPARPADPVRPDG--SRRALR------------IGLGGPVGSGKTAT 52
Query: 333 MLALCTALRDKYSVAAVTNDIFTREDGEFLVKHGALPAERIKAIETGGCPHAAIREDISI 512 + ALC ALRD+ S+A VTNDI+TRED +FL++H LPAERI A+ETG CPH AIR+DIS Sbjct: 53 VAALCRALRDRLSIAVVTNDIYTREDADFLLRHAILPAERILAVETGACPHTAIRDDISA 112
Query: 513 NLGPLEELSRSFS-TDILLCESGGDNLAANFSRELADYIIYIIDVA 647 NL +E+L + D++L ESGGDNL A FS+ L D I++IDVA Sbjct: 113 NLEAVEQLEATVGPLDLILVESGGDNLTATFSKGLVDAQIFVIDVA 158
>sp|B1W5H1|UREG1_STRGG Urease accessory protein ureG 1 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ureG1 PE=3 SV=1 Length = 234
Score = 161 bits (407), Expect = 3e-39 Identities = 84/154 (54%), Positives = 106/154 (68%), Gaps = 1/154 (0%) Frame = +3
Query: 189 GLPPHTHEPLDSPGYFSRRAQRLANRDFTERAFTVGIGGPVGSGKTALMLALCTALRDKY 368 G+P H D+P S A R D T RA +G+GGPVGSGKTA + ALC LRD+ Sbjct: 7 GVPMHLGHTHDAPAAVSADATR---PDGTRRALRIGLGGPVGSGKTATVAALCRELRDRL 63
Query: 369 SVAAVTNDIFTREDGEFLVKHGALPAERIKAIETGGCPHAAIREDISINLGPLEELSRSF 548 S+A VTNDI+TRED +FL+K+ LP ERI+A+ETG CPH AIR+DIS NL +E+L + Sbjct: 64 SIAVVTNDIYTREDADFLLKNAVLPPERIQAVETGACPHTAIRDDISANLEAVEDLEDAV 123
Query: 549 S-TDILLCESGGDNLAANFSRELADYIIYIIDVA 647 D++L ESGGDNL A FS+ L D I++IDVA Sbjct: 124 GPLDLILVESGGDNLTATFSKGLVDAQIFVIDVA 157
>sp|Q4ZMY9|UREG_PSEU2 Urease accessory protein ureG OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ureG PE=3 SV=1 Length = 205
Score = 160 bits (405), Expect = 5e-39 Identities = 79/120 (65%), Positives = 98/120 (81%), Gaps = 1/120 (0%) Frame = +3
Query: 291 VGIGGPVGSGKTALMLALCTALRDKYSVAAVTNDIFTREDGEFLVKHGALPAERIKAIET 470 VGIGGPVGSGKTAL LALC ALRD+Y++A VTNDI+TRED +FLV++ AL ERI +ET Sbjct: 8 VGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRNEALAPERIIGVET 67
Query: 471 GGCPHAAIREDISINLGPLEELSRSF-STDILLCESGGDNLAANFSRELADYIIYIIDVA 647 GGCPH AIRED SINL +++L+R F D+++ ESGGDNL+A FS EL+D IY+IDV+ Sbjct: 68 GGCPHTAIREDASINLEAVDQLNRRFEGLDLIIVESGGDNLSATFSPELSDLTIYVIDVS 127
>sp|Q48DC7|UREG_PSE14 Urease accessory protein ureG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ureG PE=3 SV=1 Length = 205
Score = 160 bits (405), Expect = 5e-39 Identities = 79/120 (65%), Positives = 98/120 (81%), Gaps = 1/120 (0%) Frame = +3
Query: 291 VGIGGPVGSGKTALMLALCTALRDKYSVAAVTNDIFTREDGEFLVKHGALPAERIKAIET 470 VGIGGPVGSGKTAL LALC ALRD+Y++A VTNDI+TRED +FLV++ AL ERI +ET Sbjct: 8 VGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRNEALAPERIIGVET 67
Query: 471 GGCPHAAIREDISINLGPLEELSRSF-STDILLCESGGDNLAANFSRELADYIIYIIDVA 647 GGCPH AIRED SINL +++L+R F D+++ ESGGDNL+A FS EL+D IY+IDV+ Sbjct: 68 GGCPHTAIREDASINLEAVDQLNRRFEGLDLIIVESGGDNLSATFSPELSDLTIYVIDVS 127
>sp|A4VQW0|UREG_PSEU5 Urease accessory protein ureG OS=Pseudomonas stutzeri (strain A1501) GN=ureG PE=3 SV=1 Length = 204
Score = 160 bits (404), Expect = 7e-39 Identities = 79/120 (65%), Positives = 98/120 (81%), Gaps = 1/120 (0%) Frame = +3
Query: 291 VGIGGPVGSGKTALMLALCTALRDKYSVAAVTNDIFTREDGEFLVKHGALPAERIKAIET 470 VGIGGPVGSGKTAL LALC ALRD+Y++A VTNDI+T+ED +FLV++ AL ERI +ET Sbjct: 8 VGIGGPVGSGKTALTLALCQALRDRYNLAVVTNDIYTQEDAQFLVRNEALAPERIIGVET 67
Query: 471 GGCPHAAIREDISINLGPLEELSRSF-STDILLCESGGDNLAANFSRELADYIIYIIDVA 647 GGCPH AIRED SINL +E+L+R F D+++ ESGGDNL+A FS EL+D IY+IDV+ Sbjct: 68 GGCPHTAIREDASINLEAVEQLNRRFPGLDLIIVESGGDNLSATFSPELSDLTIYVIDVS 127
>sp|Q4KJ34|UREG_PSEF5 Urease accessory protein ureG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ureG PE=3 SV=1 Length = 204
Score = 159 bits (403), Expect = 9e-39 Identities = 79/120 (65%), Positives = 98/120 (81%), Gaps = 1/120 (0%) Frame = +3
Query: 291 VGIGGPVGSGKTALMLALCTALRDKYSVAAVTNDIFTREDGEFLVKHGALPAERIKAIET 470 VGIGGPVGSGKTAL LALC ALR++Y++A VTNDI+TRED +FLV++ AL ERI +ET Sbjct: 8 VGIGGPVGSGKTALTLALCLALRERYNLAVVTNDIYTREDADFLVRNEALAPERIIGVET 67
Query: 471 GGCPHAAIREDISINLGPLEELSRSF-STDILLCESGGDNLAANFSRELADYIIYIIDVA 647 GGCPH AIRED SINL +++L+R F D++L ESGGDNL+A FS EL+D IY+IDV+ Sbjct: 68 GGCPHTAIREDASINLEAVDQLNRRFPGLDLILVESGGDNLSATFSPELSDLTIYVIDVS 127
>sp|Q826R7|UREG_STRAW Urease accessory protein ureG OS=Streptomyces avermitilis GN=ureG PE=3 SV=1 Length = 227
Score = 158 bits (400), Expect = 2e-38 Identities = 85/150 (56%), Positives = 102/150 (68%), Gaps = 1/150 (0%) Frame = +3
Query: 201 HTHEPLDSPGYFSRRAQRLANRDFTERAFTVGIGGPVGSGKTALMLALCTALRDKYSVAA 380 HTH D P S A R D T RA +G+GGPVGSGKTA + ALC ALRD +S+A Sbjct: 7 HTH---DGPSAVSADAHR---PDGTRRALRIGLGGPVGSGKTATVAALCRALRDAFSLAV 60
Query: 381 VTNDIFTREDGEFLVKHGALPAERIKAIETGGCPHAAIREDISINLGPLEELSRSFS-TD 557 VTNDI+TRED EFL++ LP ERI A+ETG CPH AIR+DIS NL +E+L D Sbjct: 61 VTNDIYTREDAEFLLREAVLPPERITAVETGACPHTAIRDDISANLEAVEDLEDEVGPLD 120
Query: 558 ILLCESGGDNLAANFSRELADYIIYIIDVA 647 ++L ESGGDNL A FS+ L D I++IDVA Sbjct: 121 LVLVESGGDNLTATFSKGLVDAQIFVIDVA 150
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNA6 |
Definition |
tr|A9NNA6|A9NNA6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
166 |
Score (bit) |
297.0 |
E-value |
3.0e-79 |
Report |
|