DK958898
Clone id TST39A01NGRL0003_D16
Library
Length 492
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_D16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTCTAAGAAGCTTACACGTCCCCTGTTTCTCATCGGCAGCCACAATGGCATAGCGATGGT
GAGTTGGACAGGGTGCGGCCCCGCCTTAAGTAACTTGCAAGCGTTATGCACTGCCCGCTT
CCCCAGCATAGCAATGGTGTGTGGCAACAGGTTGCGAACCAATATTCAAGGCAATGAATA
CTCTCCGGTGCAACATTTCTCAATCAAGGGCAATACTCATCTGCACAGGTCCGCTATTTT
ATGATTTTGCTGACTATTTTACAGAATGTTCTCACGTTTTCTTGTTGTGTACTCCTCGCA
GCTCAGAACTTCTGCCCTCTTTCTTAGGGATGCCCTGTTTTGATAGCGGGTTTGTTTTCT
TTAATTAGACTTGTTTCTTTTTGGCTTGAGATTTTAACCTGATCTGCTGAATCTTGATTG
TGTAGCGAAGTCATTGTCTAAGCAATTGCATCCAAAGCTGCGAATCATTATCATGCTAGT
GTTGATTTTCAG
■■Homology search results ■■ -
sp_hit_id P57989
Definition sp|P57989|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella multocida
Align length 20
Score (bit) 31.2
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958898|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_D16, 5'
(492 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P57989|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella... 31 2.7
sp|Q25255|PE44_LUCCU Peritrophin-44 OS=Lucilia cuprina PE=1 SV=1 30 4.5
sp|Q96MU6|ZN778_HUMAN Zinc finger protein 778 OS=Homo sapiens GN... 30 5.9

>sp|P57989|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella
multocida GN=csd PE=3 SV=1
Length = 421

Score = 31.2 bits (69), Expect = 2.7
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2

Query: 413 LDCVAKSLSKQLHPKLRIII 472
++CVA+ LS QLHPK III
Sbjct: 114 INCVARGLSHQLHPKAEIII 133


>sp|Q25255|PE44_LUCCU Peritrophin-44 OS=Lucilia cuprina PE=1 SV=1
Length = 356

Score = 30.4 bits (67), Expect = 4.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3

Query: 261 TECSHVFLLCTPRSSELLP----SFLGMPCFDSGFVFFN 365
TEC + FL+C +S+ + ++G+PC D + FFN
Sbjct: 299 TECKN-FLICKNETSQGMAYNYAKYIGLPCTDKNYPFFN 336


>sp|Q96MU6|ZN778_HUMAN Zinc finger protein 778 OS=Homo sapiens
GN=ZNF778 PE=2 SV=2
Length = 687

Score = 30.0 bits (66), Expect = 5.9
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = +2

Query: 35 GSHNGIAMVSWTGCGPALSNLQALCT------ARFPSIAMVCGNRLR 157
GSHNG W CG AL++ T R P + CG R
Sbjct: 175 GSHNGEETWKWKPCGKALTHSMGCATPVEMHAVRNPHVCRECGKAFR 221


tr_hit_id Q8VAG6
Definition tr|Q8VAG6|Q8VAG6_WSSV Wsv450 (WSSV510) OS=White spot syndrome virus
Align length 51
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958898|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_D16, 5'
(492 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8VAG6|Q8VAG6_WSSV Wsv450 (WSSV510) OS=White spot syndrome vi... 35 2.5
tr|B4MVZ7|B4MVZ7_DROWI GK14965 OS=Drosophila willistoni GN=GK149... 33 7.1

>tr|Q8VAG6|Q8VAG6_WSSV Wsv450 (WSSV510) OS=White spot syndrome virus
PE=4 SV=1
Length = 157

Score = 34.7 bits (78), Expect = 2.5
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1

Query: 244 ILLTILQNVLTFSCCVLLAAQNFCPLS*GCPVLIAGLFSLIRLVSFWLEIL 396
I+L++L+ + +FSC L A +S GCP S+ L+SF EIL
Sbjct: 78 IILSVLEEIASFSCLALELAMRRSHISLGCPCSFVINSSIFFLLSFPFEIL 128


>tr|B4MVZ7|B4MVZ7_DROWI GK14965 OS=Drosophila willistoni GN=GK14965
PE=4 SV=1
Length = 140

Score = 33.1 bits (74), Expect = 7.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2

Query: 20 PLFLIGSHN--GIAMVSWTGCGPALSNLQALCTARFPSIAMVCGNRLRTNIQGNEYSPVQ 193
P+ + GSH G A + TG G + AL TAR S V + + Q + P+
Sbjct: 20 PVAVHGSHTAAGAAAATVTGTGTGTTTASALLTARLTSANTVTSSVTSLHQQQQQQEPLL 79

Query: 194 HFSIKGNT 217
H S G+T
Sbjct: 80 HQSTTGHT 87