DK958901 |
Clone id |
TST39A01NGRL0003_D19 |
Library |
TST39 |
Length |
623 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_D19. 5' end sequence. |
Accession |
DK958901 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL394Contig1 |
Sequence |
CTGCGTTCTAGGGTAAGCTCCAGCACCGCTTCTTCATAGCCAATAAGCCTGCGAGCGAGC CATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACCGCAAGAGAGGAAAGAACGAAGCAGA CGATGAGAAGCGAGAGTTGGTCTTCAAAGAAGATGGGCAAGAATACGCACAAGTGCTCAG AATGCTTGGCAATGGTCGCTGCGAAGCTCTGTGTATAGATGGTAACAAGAGGCTCTGTCA CATTCGGGGTAAGATGCATAAGAAGGTATGGATCGCTTCTGGAGACATTATTCTCGTTGG GCTGCGTGACTATCAGGATGACAAGGCTGATGTGATCCTCAAGTATCAGCCTGATGAAGC TCGTCTTCTTAAGGCATACGGAGAGCTTCCTGACAATGTCCGCCTCAATGAAGGTATTGC AGGTGGCATGGATGAAGAAGATGATGGTGCTGGTGATGACTACCTGGAATTCGAAGATGA GGACATTGATAAGATCTGATCTGTGAGAACAGCATACTTTTTTGAGTATTTAAAGCCTGT GCCTGTTAGCCTGGGAGCCATATCTAGGATTTTCTGTCAAGGCCTTGCATGCTATGGTTT TTTGCATGTTGGGGCTTTTATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P56331 |
Definition |
sp|P56331|IF1A_ONOVI Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia |
Align length |
128 |
Score (bit) |
211.0 |
E-value |
3.0e-54 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NLE4 |
Definition |
tr|A9NLE4|A9NLE4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
128 |
Score (bit) |
215.0 |
E-value |
1.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958901|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_D19, 5' (623 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NLE4|A9NLE4_PICSI Putative uncharacterized protein OS=Picea... 215 1e-54 tr|A9TTA1|A9TTA1_PHYPA Predicted protein OS=Physcomitrella paten... 214 3e-54 tr|A9RER3|A9RER3_PHYPA Predicted protein OS=Physcomitrella paten... 214 3e-54 tr|A5BQH0|A5BQH0_VITVI Putative uncharacterized protein (Chromos... 213 6e-54 tr|A9PCD3|A9PCD3_POPTR Putative uncharacterized protein OS=Popul... 213 7e-54 tr|A9PE28|A9PE28_POPTR Putative uncharacterized protein OS=Popul... 212 2e-53 tr|A7NVA8|A7NVA8_VITVI Chromosome chr18 scaffold_1, whole genome... 209 1e-52 tr|Q2XTB8|Q2XTB8_SOLTU Putative translation initiation factor eI... 209 1e-52 tr|A9P2I8|A9P2I8_PICSI Putative uncharacterized protein OS=Picea... 209 1e-52 tr|B5M1Y2|B5M1Y2_RHEAU Translation initiation factor OS=Rheum au... 208 2e-52 tr|Q9SJB9|Q9SJB9_ARATH Putative translation initiation factor eI... 208 2e-52 tr|Q93VF1|Q93VF1_ARATH At2g04520/T1O3.7 OS=Arabidopsis thaliana ... 207 3e-52 tr|Q9FKI2|Q9FKI2_ARATH Similarity to translation initiation fact... 205 2e-51 tr|Q8VXT0|Q8VXT0_BETVU Translation initiation factor (EIF-1A) OS... 205 2e-51 tr|Q7Y1V3|Q7Y1V3_ORYSJ Os02g0300700 protein OS=Oryza sativa subs... 201 3e-50 tr|A2X3S0|A2X3S0_ORYSI Putative uncharacterized protein OS=Oryza... 201 3e-50 tr|Q7Y1V2|Q7Y1V2_ORYSJ Os06g0342200 protein OS=Oryza sativa subs... 201 4e-50 tr|A2YCL4|A2YCL4_ORYSI Putative uncharacterized protein OS=Oryza... 201 4e-50 tr|B4FUJ1|B4FUJ1_MAIZE Putative uncharacterized protein OS=Zea m... 196 9e-49 tr|A7QB05|A7QB05_VITVI Chromosome chr5 scaffold_72, whole genome... 191 4e-47 tr|A5BTF1|A5BTF1_VITVI Putative uncharacterized protein (Fragmen... 191 4e-47 tr|B6T9H2|B6T9H2_MAIZE Eukaryotic translation initiation factor ... 187 3e-46 tr|A8I4H4|A8I4H4_CHLRE Eukaryotic initiation factor OS=Chlamydom... 166 8e-40 tr|A7SX41|A7SX41_NEMVE Predicted protein (Fragment) OS=Nematoste... 166 8e-40 tr|A7SV47|A7SV47_NEMVE Predicted protein OS=Nematostella vectens... 166 8e-40 tr|Q4SZY2|Q4SZY2_TETNG Chromosome undetermined SCAF11458, whole ... 166 1e-39 tr|A4S6I7|A4S6I7_OSTLU Predicted protein OS=Ostreococcus lucimar... 166 1e-39 tr|B7PUC5|B7PUC5_IXOSC Translation initiation factor 1A OS=Ixode... 164 4e-39 tr|Q5ZIE2|Q5ZIE2_CHICK Putative uncharacterized protein OS=Gallu... 162 1e-38 tr|B5XB91|B5XB91_SALSA Eukaryotic translation initiation factor ... 162 1e-38
>tr|A9NLE4|A9NLE4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 145
Score = 215 bits (548), Expect = 1e-54 Identities = 105/128 (82%), Positives = 109/128 (85%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDG KRLCHIRGKMHKKVWIA+GDI+ Sbjct: 18 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGTKRLCHIRGKMHKKVWIAAGDIV 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKY PDEARLLKAYGELP+NVRLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENVRLNEGIAGGLDEDEEGGADDYIEF 137
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 138 EDEDIDKI 145
>tr|A9TTA1|A9TTA1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_150243 PE=3 SV=1 Length = 145
Score = 214 bits (546), Expect = 3e-54 Identities = 106/128 (82%), Positives = 109/128 (85%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EA+DEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDG KRLCHIRGKMHKKVWIASGDII Sbjct: 18 EAEDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGTKRLCHIRGKMHKKVWIASGDII 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKYQPDEARLLKAY ELP+NVRLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYQPDEARLLKAYSELPENVRLNEGIAGGMDDEEDGGGDDYVEF 137
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 138 EDEDIDKI 145
>tr|A9RER3|A9RER3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158714 PE=3 SV=1 Length = 145
Score = 214 bits (546), Expect = 3e-54 Identities = 106/128 (82%), Positives = 109/128 (85%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EA+DEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDG KRLCHIRGKMHKKVWIASGDII Sbjct: 18 EAEDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGTKRLCHIRGKMHKKVWIASGDII 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKYQPDEARLLKAY ELP+NVRLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYQPDEARLLKAYSELPENVRLNEGIAGGMDDEEGGGDDDYVEF 137
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 138 EDEDIDKI 145
>tr|A5BQH0|A5BQH0_VITVI Putative uncharacterized protein (Chromosome chr15 scaffold_40, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00026971001 PE=3 SV=1 Length = 145
Score = 213 bits (543), Expect = 6e-54 Identities = 104/128 (81%), Positives = 108/128 (84%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEA+CIDG KRLCHIRGKMHKKVWIA+GDII Sbjct: 18 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDII 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKY PDEARLLKAYGELP+N RLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIAGGLDEEDEGAGDDYIEF 137
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 138 EDEDIDKI 145
>tr|A9PCD3|A9PCD3_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 145
Score = 213 bits (542), Expect = 7e-54 Identities = 103/128 (80%), Positives = 108/128 (84%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EADDEKREL+FKEDGQEYAQVLRMLGNGRCEA+CIDG KRLCHIRGKMHKKVWIA+GDII Sbjct: 18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDII 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKY PDEARLLKAYGELP+N RLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIAGGLDEEDDGAGDDYIEF 137
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 138 EDEDIDKI 145
>tr|A9PE28|A9PE28_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 145
Score = 212 bits (539), Expect = 2e-53 Identities = 103/128 (80%), Positives = 107/128 (83%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EADDEKREL+FKEDGQEYAQVLRMLGNGRCEA CIDG KRLCHIRGKMHKKVWIA+GDII Sbjct: 18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDII 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKY PDEARLLKAYGELP+N RLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIAGGLDEEDDGAGDDYIEF 137
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 138 EDEDIDKI 145
>tr|A7NVA8|A7NVA8_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015363001 PE=3 SV=1 Length = 142
Score = 209 bits (532), Expect = 1e-52 Identities = 104/128 (81%), Positives = 108/128 (84%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEA+CIDG KRLCHIRGKMHKKVWIA+GDII Sbjct: 18 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDII 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKY PDEARLLKAYGELP+N RLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN---EGGLDEEDEGAGDDYIEF 134
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 135 EDEDIDKI 142
>tr|Q2XTB8|Q2XTB8_SOLTU Putative translation initiation factor eIF-1A-like OS=Solanum tuberosum PE=2 SV=1 Length = 144
Score = 209 bits (531), Expect = 1e-52 Identities = 103/128 (80%), Positives = 108/128 (84%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEA+CIDG KRLCHIRGKMHKKVWIA+GDI+ Sbjct: 18 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIV 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKY PDEARLLKAYGELP+N RLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN-EGIANLDEEDENAADDYIEF 136
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 137 EDEDIDKI 144
>tr|A9P2I8|A9P2I8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 145
Score = 209 bits (531), Expect = 1e-52 Identities = 104/128 (81%), Positives = 107/128 (83%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EADDEKRELVFKEDGQEYAQV RMLGNGRCEALCIDG KRL HIRGKMHKKVWIA+GDII Sbjct: 18 EADDEKRELVFKEDGQEYAQVQRMLGNGRCEALCIDGTKRLGHIRGKMHKKVWIAAGDII 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKY PDEARLLKAYGELP+NVRLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENVRLNEGIAGGLDEDDEGGGDDYIEF 137
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 138 EDEDIDKI 145
>tr|B5M1Y2|B5M1Y2_RHEAU Translation initiation factor OS=Rheum australe PE=2 SV=1 Length = 144
Score = 208 bits (530), Expect = 2e-52 Identities = 104/128 (81%), Positives = 107/128 (83%) Frame = +2
Query: 113 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGNKRLCHIRGKMHKKVWIASGDII 292 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEA CID KRLCHIRGKMHKKVWIA+GDII Sbjct: 18 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDNTKRLCHIRGKMHKKVWIAAGDII 77
Query: 293 LVGLRDYQDDKADVILKYQPDEARLLKAYGELPDNVRLNXXXXXXXXXXXXXXXXXYLEF 472 LVGLRDYQDDKADVILKY PDEARLLKAYGELPDN+RLN Y+EF Sbjct: 78 LVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNIRLN-EGIATLDEEDDGAADDYIEF 136
Query: 473 EDEDIDKI 496 EDEDIDKI Sbjct: 137 EDEDIDKI 144
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