DK959010 |
Clone id |
TST39A01NGRL0003_I11 |
Library |
TST39 |
Length |
651 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_I11. 5' end sequence. |
Accession |
DK959010 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL265Contig1 |
Sequence |
CAGCTCTTCGCCTCTTCATATTCTGCTCCCGTCTCTCAGACACTGACACGAACCTACAGG ATTCGGAATCCTTGCTCTCATCGCCGACGATGGCTCTCGTTTTCAAGGTCACGCATGGAG ACACCCTCCGCAGATGGGTGGTTTCTGACTCAATCAGTGCAGAGATGTTCCCAGTTACAT TGGAGCAATTGCAGGCCAAAGTCAGGGAGCTCTTCCAGTTCCCTCCTTCTGCTGTGCTCG CTTTTACCTACTTAGATAAAGATAATGATGTGGTTACGCTGGGGGATGATCGTGATCTTG TGGACGCATGTCTTGTTCAATGCTTGAACCCACTTCGCCTTGAGGTTCAGGTCTTGGAAT CAAAGTCAAATGGAAGTGATCGCGCACACCAGCCAGCAGACAATTACAACATGGAAGTCT TTCTAAAGCTTTTGTTTCCTCATGCAACAGCTGAGGCTTTGCAAGGTTTTCTACAGTCGC TTGACCCTTCGCTATCTATTGCAACTCTTATTTTAAAGGCTCAGGATGCTTTCAAGGACT TCTTAGCTCATGCAGCAAGGCCAGAGTTTCCCAAACCTGGACCATCGGATAAGCCTGCTC ATCATCATCCATACAAGCACCCTTTTGGAGATATGCACTGCAAATCCATGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O13965 |
Definition |
sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces pombe |
Align length |
63 |
Score (bit) |
34.3 |
E-value |
0.58 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SHX9 |
Definition |
tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
88 |
Score (bit) |
82.8 |
E-value |
2.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959010|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_I11, 5' (651 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella paten... 83 2e-14 tr|A9NT24|A9NT24_PICSI Putative uncharacterized protein OS=Picea... 78 4e-13 tr|A9NP76|A9NP76_PICSI Putative uncharacterized protein OS=Picea... 77 9e-13 tr|B8K1X5|B8K1X5_WHEAT Ubiquitin-associated protein OS=Triticum ... 75 3e-12 tr|Q7XK43|Q7XK43_ORYSJ Os04g0476800 protein OS=Oryza sativa subs... 72 4e-11 tr|Q01JY6|Q01JY6_ORYSA OSIGBa0116M22.2 protein OS=Oryza sativa G... 72 4e-11 tr|B8AVG3|B8AVG3_ORYSI Putative uncharacterized protein OS=Oryza... 72 4e-11 tr|Q6ZH84|Q6ZH84_ORYSJ Os02g0593700 protein OS=Oryza sativa subs... 71 5e-11 tr|A2X6P6|A2X6P6_ORYSI Putative uncharacterized protein OS=Oryza... 71 5e-11 tr|Q0ZII2|Q0ZII2_NICPL Joka2 (Fragment) OS=Nicotiana plumbaginif... 64 1e-08 tr|A9S1V5|A9S1V5_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-06 tr|Q9SB64|Q9SB64_ARATH Putative uncharacterized protein AT4g2469... 52 3e-05 tr|A5ADS2|A5ADS2_VITVI Putative uncharacterized protein OS=Vitis... 49 3e-04 tr|A0C582|A0C582_PARTE Chromosome undetermined scaffold_15, whol... 37 0.80 tr|Q14VK1|Q14VK1_9VIRU ORF129 OS=Ranid herpesvirus 1 PE=4 SV=1 36 2.3 tr|Q55CE3|Q55CE3_DICDI ZZ-type Zn finger-containing protein OS=D... 36 2.3 tr|Q2TXP8|Q2TXP8_ASPOR Predicted protein OS=Aspergillus oryzae G... 35 3.0 tr|B8NVF1|B8NVF1_ASPFL Putative uncharacterized protein OS=Asper... 35 3.0 tr|Q4SQC2|Q4SQC2_TETNG Chromosome 4 SCAF14533, whole genome shot... 35 5.2 tr|B6NHG6|B6NHG6_BRAFL Putative uncharacterized protein OS=Branc... 35 5.2 tr|A9RSB9|A9RSB9_PHYPA SWI/SNF class chromatin remodeling comple... 35 5.2 tr|Q4DEU7|Q4DEU7_TRYCR Putative uncharacterized protein OS=Trypa... 34 6.7 tr|A8N2P6|A8N2P6_COPC7 Predicted protein OS=Coprinopsis cinerea ... 34 6.7 tr|Q39GN9|Q39GN9_BURS3 ABC cobalamin/Fe3+-siderophore transporte... 34 8.8 tr|Q3XXI1|Q3XXI1_ENTFC Haloacid dehalogenase-like hydrolase:Cati... 34 8.8 tr|B8LCA4|B8LCA4_THAPS Predicted protein OS=Thalassiosira pseudo... 34 8.8 tr|A0C9S2|A0C9S2_PARTE Chromosome undetermined scaffold_16, whol... 34 8.8 tr|A7EUB6|A7EUB6_SCLS1 Putative uncharacterized protein OS=Scler... 34 8.8
>tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212537 PE=4 SV=1 Length = 732
Score = 82.8 bits (203), Expect = 2e-14 Identities = 41/88 (46%), Positives = 54/88 (61%) Frame = +3
Query: 99 VFKVTHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVVT 278 VFK+ HGD +RR+ V S+ + QL+ +R+ F+ P S+ L Y DKD DVVT Sbjct: 5 VFKIKHGDVVRRFTVQPSVPGGGPDMNFSQLEDTIRQAFKLPASSDLVINYNDKDGDVVT 64
Query: 279 LGDDRDLVDACLVQCLNPLRLEVQVLES 362 + D DL DAC++Q LNPLRL V ES Sbjct: 65 MAGDHDLYDACVIQELNPLRLTVTAHES 92
>tr|A9NT24|A9NT24_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 174
Score = 78.2 bits (191), Expect = 4e-13 Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 3/118 (2%) Frame = +3
Query: 90 MALVFKVTHGDTLRRWVVSDSISAEMFP-VTLEQLQAKVRELFQFPPSAVLAFTYLDKDN 266 MALV KV + LRR + + E P + ++ L+ K+RELF+ P+A ++ TY D+D Sbjct: 1 MALVVKVKYQGILRRLTLQ--LREEYVPEINMDALKCKIRELFKLNPNADMSITYTDEDG 58
Query: 267 DVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPAD--NYNMEVFLKLL 434 DVVT+ DD D +DA + Q LNPLRL+V + SN S+R+ PA+ N ME L+ L Sbjct: 59 DVVTMADDVDFLDA-VRQGLNPLRLDVSLATEPSN-SERSSTPAEQRNEGMEPLLEAL 114
>tr|A9NP76|A9NP76_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 174
Score = 77.0 bits (188), Expect = 9e-13 Identities = 50/118 (42%), Positives = 72/118 (61%), Gaps = 3/118 (2%) Frame = +3
Query: 90 MALVFKVTHGDTLRRWVVSDSISAEMFP-VTLEQLQAKVRELFQFPPSAVLAFTYLDKDN 266 M LV KV + LRR + + E P + ++ L+ K+RELF+ P+A ++ TY D+D Sbjct: 1 MTLVVKVKYQGILRRLTLQ--LREEYVPEINMDALKCKIRELFKLNPNADMSITYTDEDG 58
Query: 267 DVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPAD--NYNMEVFLKLL 434 DVVT+ DD D +DA + Q LNPLRL+V + SN S+R+ PA+ N ME L+ L Sbjct: 59 DVVTMADDVDFLDA-VRQGLNPLRLDVSLATEPSN-SERSSSPAEQRNEGMEPLLEAL 114
>tr|B8K1X5|B8K1X5_WHEAT Ubiquitin-associated protein OS=Triticum aestivum GN=UBA PE=2 SV=1 Length = 870
Score = 75.1 bits (183), Expect = 3e-12 Identities = 40/94 (42%), Positives = 57/94 (60%) Frame = +3
Query: 96 LVFKVTHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 275 +V KV +GDTL+R+ + ++ F + L L++K+ F+F P A TY D+D DVV Sbjct: 21 VVVKVKYGDTLKRF--NGYVNGTHFTLNLSALRSKIASAFKFAPDADFILTYTDEDGDVV 78
Query: 276 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGS 377 L DD DL DA + Q LNPLR+ VQ+ S + S Sbjct: 79 MLDDDEDLHDAAIHQKLNPLRINVQLKNSHAGAS 112
>tr|Q7XK43|Q7XK43_ORYSJ Os04g0476800 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0044K18.2 PE=4 SV=1 Length = 881
Score = 71.6 bits (174), Expect = 4e-11 Identities = 41/99 (41%), Positives = 57/99 (57%) Frame = +3
Query: 96 LVFKVTHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 275 LV KV G TL+R+ ++ F + L L++K+ F+F P TY D+D DVV Sbjct: 18 LVVKVKFGGTLKRFTAF--VNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVV 75
Query: 276 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQ 392 L DD DL DA + Q LNPLR+ V+ L+S S+G + Q Sbjct: 76 ILDDDSDLCDAAISQRLNPLRINVE-LKSSSDGVHQTKQ 113
>tr|Q01JY6|Q01JY6_ORYSA OSIGBa0116M22.2 protein OS=Oryza sativa GN=OSIGBa0116M22.2 PE=4 SV=1 Length = 881
Score = 71.6 bits (174), Expect = 4e-11 Identities = 41/99 (41%), Positives = 57/99 (57%) Frame = +3
Query: 96 LVFKVTHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 275 LV KV G TL+R+ ++ F + L L++K+ F+F P TY D+D DVV Sbjct: 18 LVVKVKFGGTLKRFTAF--VNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVV 75
Query: 276 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQ 392 L DD DL DA + Q LNPLR+ V+ L+S S+G + Q Sbjct: 76 ILDDDSDLCDAAISQRLNPLRINVE-LKSSSDGVHQTKQ 113
>tr|B8AVG3|B8AVG3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16310 PE=4 SV=1 Length = 881
Score = 71.6 bits (174), Expect = 4e-11 Identities = 41/99 (41%), Positives = 57/99 (57%) Frame = +3
Query: 96 LVFKVTHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 275 LV KV G TL+R+ ++ F + L L++K+ F+F P TY D+D DVV Sbjct: 18 LVVKVKFGGTLKRFTAF--VNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVV 75
Query: 276 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQ 392 L DD DL DA + Q LNPLR+ V+ L+S S+G + Q Sbjct: 76 ILDDDSDLCDAAISQRLNPLRINVE-LKSSSDGVHQTKQ 113
>tr|Q6ZH84|Q6ZH84_ORYSJ Os02g0593700 protein OS=Oryza sativa subsp. japonica GN=OJ1067_B01.6-1 PE=2 SV=1 Length = 845
Score = 71.2 bits (173), Expect = 5e-11 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 1/114 (0%) Frame = +3
Query: 66 ESLLSSPT-MALVFKVTHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLA 242 E L S P +V KV +G+TL+R+ + F + L L++K+ F+F Sbjct: 10 EGLASRPDEWDVVLKVKYGETLKRF--GGYVQGPQFSLNLSALRSKIASAFKFGSDVDFI 67
Query: 243 FTYLDKDNDVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPADN 404 TY D+D D+V L DD DL DA + Q LNPLR+ VQ+ S + Q +DN Sbjct: 68 LTYTDEDGDIVMLDDDDDLHDAAIHQKLNPLRINVQLNNSHTAAPQAKQQDSDN 121
>tr|A2X6P6|A2X6P6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07886 PE=4 SV=1 Length = 845
Score = 71.2 bits (173), Expect = 5e-11 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 1/114 (0%) Frame = +3
Query: 66 ESLLSSPT-MALVFKVTHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLA 242 E L S P +V KV +G+TL+R+ + F + L L++K+ F+F Sbjct: 10 EGLASRPDEWDVVLKVKYGETLKRF--GGYVQGPQFSLNLSALRSKIASAFKFGSDVDFI 67
Query: 243 FTYLDKDNDVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPADN 404 TY D+D D+V L DD DL DA + Q LNPLR+ VQ+ S + Q +DN Sbjct: 68 LTYTDEDGDIVMLDDDDDLHDAAIHQKLNPLRINVQLNNSHTAAPQAKQQDSDN 121
>tr|Q0ZII2|Q0ZII2_NICPL Joka2 (Fragment) OS=Nicotiana plumbaginifolia PE=2 SV=1 Length = 467
Score = 63.5 bits (153), Expect = 1e-08 Identities = 39/102 (38%), Positives = 61/102 (59%) Frame = +3
Query: 93 ALVFKVTHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDV 272 A+V KV + +TLRR+ + + E + ++ L K+ +LF A L TY+D+D DV Sbjct: 1 AIVIKVKYEETLRRF--NARVINEKLDLNMDGLSDKIFQLFNIARDAELILTYVDEDGDV 58
Query: 273 VTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPA 398 VTL DD DL D + Q LNPLR+ V++ N ++R+ +P+ Sbjct: 59 VTLVDDEDLQDV-MRQDLNPLRISVRL-----NAAERSSRPS 94
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