DK959012 |
Clone id |
TST39A01NGRL0003_I13 |
Library |
TST39 |
Length |
631 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_I13. 5' end sequence. |
Accession |
DK959012 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1075Contig1 |
Sequence |
ATAGAACCAGGCTTTCGGAAGTACATGGTACATCGCAAGGCCTCTGCCACTCTTTCTTTC AGTGCTTCTATGGCCCAGTTGGTCACAAGGGTTCCACCTAGCTGTTTTAACGAGTCAGAT ATGACTGCATGGAAGGATGAGGGCAATGAAGGCGCTCAAAGAAATAATCAGAATGGCAAG GGGTGGAAGTGGATTGTAGTGGGGGGAGCTGTTGTACTTGCTTGCGGCCTGGACAAGGGA ATAGTGGGGAAGATATTAGTTTTTGGTCTGGCCAGGAGGCTGAGCAAGCTTGGGAGACGG TTGTGAGCGATGTTTCCTTGCTTGCATGCATATCACTGGCACAAGCTCAAATGCCCTGGG AGGTCATCTGTTTGTGGAGCTGGTTGGAGAGCCCCTTGAGGTTGGCGCCCACGCCCTTGG CTGATGGTGCTCTGTTTTTTATGCTAAAGAGCTATGTCCTAAGCTATGCCACTGGAAAAT TGGTTGGAGCATTCTGAGAGGCAGGTGTCATGGCATACGTTGAAGCCAGGTTTCTGTATT CTGTTTGGGAACAGTAGCCCGAGGCTTTATCAAAAAGTTATCTAGCTCTATGGATCTCAT ATGTACCTTTGTACCCTATGTTTTTATTTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1E1H4 |
Definition |
sp|Q1E1H4|NST1_COCIM Stress response protein NST1 OS=Coccidioides immitis |
Align length |
75 |
Score (bit) |
32.7 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NUT1 |
Definition |
tr|A9NUT1|A9NUT1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
101 |
Score (bit) |
68.2 |
E-value |
4.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959012|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_I13, 5' (617 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NUT1|A9NUT1_PICSI Putative uncharacterized protein OS=Picea... 68 4e-10 tr|A9TCG3|A9TCG3_PHYPA Predicted protein OS=Physcomitrella paten... 61 6e-08 tr|A9U359|A9U359_PHYPA Predicted protein OS=Physcomitrella paten... 58 4e-07 tr|B4G219|B4G219_MAIZE Putative uncharacterized protein OS=Zea m... 50 1e-04 tr|B4FP02|B4FP02_MAIZE Putative uncharacterized protein OS=Zea m... 50 1e-04 tr|Q7XTJ2|Q7XTJ2_ORYSJ Os04g0119500 protein OS=Oryza sativa subs... 49 3e-04 tr|Q6ZXK5|Q6ZXK5_ORYSJ Membrane related protein OS=Oryza sativa ... 49 3e-04 tr|Q01MR5|Q01MR5_ORYSA H0716A07.8 protein OS=Oryza sativa GN=H07... 49 3e-04 tr|A2XPT7|A2XPT7_ORYSI Putative uncharacterized protein OS=Oryza... 49 3e-04 tr|Q9XIR9|Q9XIR9_ARATH Putative membrane related protein OS=Arab... 46 0.002 tr|Q8L7P8|Q8L7P8_ARATH Membrane related protein CP5, putative OS... 45 0.003 tr|A7NX17|A7NX17_VITVI Chromosome chr5 scaffold_2, whole genome ... 45 0.004 tr|Q8W255|Q8W255_MEDSA Putative nodule membrane protein OS=Medic... 44 0.006 tr|Q7F1L8|Q7F1L8_ORYSJ Putative membrane related protein CP5 OS=... 44 0.008 tr|Q0D845|Q0D845_ORYSJ Os07g0185200 protein OS=Oryza sativa subs... 44 0.008 tr|B8B7W5|B8B7W5_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.008 tr|A7QJ33|A7QJ33_VITVI Chromosome chr2 scaffold_105, whole genom... 44 0.008 tr|A3BHA1|A3BHA1_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.008 tr|B7FHR5|B7FHR5_MEDTR Putative uncharacterized protein OS=Medic... 43 0.013 tr|B4G0M5|B4G0M5_MAIZE Putative uncharacterized protein OS=Zea m... 41 0.049 tr|Q9LS84|Q9LS84_ARATH Membrane related protein-like (Putative u... 39 0.32 tr|Q93ZZ1|Q93ZZ1_ARATH Putative uncharacterized protein At3g2308... 39 0.32 tr|Q2V3T7|Q2V3T7_ARATH Uncharacterized protein At3g23080.2 OS=Ar... 39 0.32 tr|Q6Z705|Q6Z705_ORYSJ Putative membrane related protein CP5 OS=... 37 0.93 tr|B8AGY6|B8AGY6_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.93 tr|A3A2N2|A3A2N2_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.93 tr|B6TV06|B6TV06_MAIZE CP5 OS=Zea mays PE=2 SV=1 35 2.7 tr|B6T237|B6T237_MAIZE CP5 OS=Zea mays PE=2 SV=1 35 2.7 tr|B8AN54|B8AN54_ORYSI Putative uncharacterized protein OS=Oryza... 35 3.5 tr|B3P199|B3P199_DROER GG19335 OS=Drosophila erecta GN=GG19335 P... 34 6.0
>tr|A9NUT1|A9NUT1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 426
Score = 68.2 bits (165), Expect = 4e-10 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%) Frame = +1
Query: 1 IEPGFRKYMVHRKASATLSFSASMAQLVTRVPPSCFNESDMTAWKDEGNEG-AQRNNQNG 177 +EPG R Y + RK+ A LS SA MA++ T++P S D+ + +D +E Q G Sbjct: 329 VEPGVRAYQMARKSDAPLSRSALMARINTKLPVS-----DLRSLEDSSDEEEVATKTQQG 383
Query: 178 KGWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSKLGRR 300 W+W+ D+G+V K L+FG+ARR LG+R Sbjct: 384 IPWRWVIVGGAVALACGLDRGVVSKALIFGVARRFGNLGKR 424
>tr|A9TCG3|A9TCG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_143492 PE=4 SV=1 Length = 435
Score = 60.8 bits (146), Expect = 6e-08 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 6/107 (5%) Frame = +1
Query: 1 IEPGFRKYMVHRKASATLSFSASMAQLVTRVPPSCFNESDMTAWKDEGNEGAQR------ 162 + PG KY RKA+ LS S MA+ +VP +E + + K +E + Sbjct: 329 MSPGIDKYRAERKANIPLSASTKMARKCCKVPRHLLSEPESSQTKSIDSENVKVVKDIDI 388
Query: 163 NNQNGKGWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSKLGRRL 303 ++ N KWI D+G VGK LVFG+A+RL ++GRRL Sbjct: 389 HHGNKGCMKWIILGGAVALACSIDRGAVGKFLVFGVAKRLGRVGRRL 435
>tr|A9U359|A9U359_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155288 PE=4 SV=1 Length = 429
Score = 58.2 bits (139), Expect = 4e-07 Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 9/108 (8%) Frame = +1
Query: 7 PGFRKYMVHRKASATLSFSASMAQLVTRVPPSCFNESD-MTAWKDEGN--------EGAQ 159 PG KY RKA+ LS SA MA+ +VP +E + +T D N Q Sbjct: 324 PGLNKYRADRKANLPLSPSAKMARKFWKVPRHLLSEPERLTKSFDSENVRIVAVRDSDIQ 383
Query: 160 RNNQNGKGWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSKLGRRL 303 + N+N KW+ D+G VGK LV G+ARRL ++GRRL Sbjct: 384 QENKNYV--KWVILGGAVALACGIDRGAVGKFLVLGVARRLGRIGRRL 429
>tr|B4G219|B4G219_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 438
Score = 50.1 bits (118), Expect = 1e-04 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%) Frame = +1
Query: 1 IEPGFRKYMVHRKASATLSFSASMAQLVTRVPPSCFNES---DMTAWKDEGNEGAQRNN- 168 ++ GFR Y R TLS S MA++ T++ + N+ D++ +E N Sbjct: 338 LQSGFRAYQQMRHTETTLSHSVIMARMTTKISITASNDPLDHDLSVADKISDENDSSNAV 397
Query: 169 QNGKGWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSK 288 Q+G WKW+ + G+VGK ++ G ARR +K Sbjct: 398 QHGFDWKWLVVGGAVAAVCVLNTGLVGKAVLLGAARRQAK 437
>tr|B4FP02|B4FP02_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 123
Score = 50.1 bits (118), Expect = 1e-04 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%) Frame = +1
Query: 1 IEPGFRKYMVHRKASATLSFSASMAQLVTRVPPSCFNES---DMTAWKDEGNEGAQRNN- 168 ++ GFR Y R TLS S MA++ T++ + N+ D++ +E N Sbjct: 23 LQSGFRAYQQMRHTETTLSHSVIMARMTTKISITASNDPLDHDLSVADKISDENDSSNAV 82
Query: 169 QNGKGWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSK 288 Q+G WKW+ + G+VGK ++ G ARR +K Sbjct: 83 QHGFDWKWLVVGGAVAAVCVLNTGLVGKAVLLGAARRQAK 122
>tr|Q7XTJ2|Q7XTJ2_ORYSJ Os04g0119500 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020P07.12 PE=2 SV=2 Length = 400
Score = 48.5 bits (114), Expect = 3e-04 Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Frame = +1
Query: 1 IEPGFRKYMVHRKASATLSFSASMAQLVTRVPPS-CFNESDMTAWKDEGNEGAQR-NNQN 174 IEPG R Y + R A LS A+MA + T+V P D T N A++ + Sbjct: 299 IEPGLRAYQIARTAGEPLSKCAAMAHVNTKVDPDELITAEDKTEASSTNNAEAEKPKHWT 358
Query: 175 GKGWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSKLGRR 300 G K I D G++ K L+FG ARR + GRR Sbjct: 359 GNIPKVILVGGAVALACTFDHGLLTKALIFGTARRFAGPGRR 400
>tr|Q6ZXK5|Q6ZXK5_ORYSJ Membrane related protein OS=Oryza sativa subsp. japonica GN=mrp1 PE=2 SV=1 Length = 400
Score = 48.5 bits (114), Expect = 3e-04 Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Frame = +1
Query: 1 IEPGFRKYMVHRKASATLSFSASMAQLVTRVPPS-CFNESDMTAWKDEGNEGAQR-NNQN 174 IEPG R Y + R A LS A+MA + T+V P D T N A++ + Sbjct: 299 IEPGLRAYQIARTAGEPLSKCAAMAHVNTKVDPDELITAEDKTEASSTNNAEAEKPKHWT 358
Query: 175 GKGWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSKLGRR 300 G K I D G++ K L+FG ARR + GRR Sbjct: 359 GNIPKVILVGGAVALACTFDHGLLTKALIFGTARRFAGPGRR 400
>tr|Q01MR5|Q01MR5_ORYSA H0716A07.8 protein OS=Oryza sativa GN=H0716A07.8 PE=4 SV=1 Length = 400
Score = 48.5 bits (114), Expect = 3e-04 Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Frame = +1
Query: 1 IEPGFRKYMVHRKASATLSFSASMAQLVTRVPPS-CFNESDMTAWKDEGNEGAQR-NNQN 174 IEPG R Y + R A LS A+MA + T+V P D T N A++ + Sbjct: 299 IEPGLRAYQIARTAGEPLSKCAAMAHVNTKVDPDELITAEDKTEASSTNNAEAEKPKHWT 358
Query: 175 GKGWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSKLGRR 300 G K I D G++ K L+FG ARR + GRR Sbjct: 359 GNIPKVILVGGAVALACTFDHGLLTKALIFGTARRFAGPGRR 400
>tr|A2XPT7|A2XPT7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14648 PE=4 SV=1 Length = 400
Score = 48.5 bits (114), Expect = 3e-04 Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Frame = +1
Query: 1 IEPGFRKYMVHRKASATLSFSASMAQLVTRVPPS-CFNESDMTAWKDEGNEGAQR-NNQN 174 IEPG R Y + R A LS A+MA + T+V P D T N A++ + Sbjct: 299 IEPGLRAYQIARTAGEPLSKCAAMAHVNTKVDPDELITAEDKTEASSTNNAEAEKPKHWT 358
Query: 175 GKGWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSKLGRR 300 G K I D G++ K L+FG ARR + GRR Sbjct: 359 GNIPKVILVGGAVALACTFDHGLLTKALIFGTARRFAGPGRR 400
>tr|Q9XIR9|Q9XIR9_ARATH Putative membrane related protein OS=Arabidopsis thaliana GN=At1g64720 PE=4 SV=1 Length = 385
Score = 46.2 bits (108), Expect = 0.002 Identities = 31/101 (30%), Positives = 50/101 (49%) Frame = +1
Query: 1 IEPGFRKYMVHRKASATLSFSASMAQLVTRVPPSCFNESDMTAWKDEGNEGAQRNNQNGK 180 IEPG R Y + A A LS SA MA + T+V F + + G++ +N Sbjct: 290 IEPGLRAYQRAKAAGAGLSPSAIMAHINTKVSAEEFMNERGSIAEVTGDKPTGKNIP--- 346
Query: 181 GWKWIXXXXXXXXXXXXDKGIVGKILVFGLARRLSKLGRRL 303 K + DKG++ K ++FG+ARR +++G+R+ Sbjct: 347 --KILVVGGAIALACTLDKGLLTKAVIFGVARRFARMGKRM 385
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