DK959018 |
Clone id |
TST39A01NGRL0003_I19 |
Library |
TST39 |
Length |
628 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_I19. 5' end sequence. |
Accession |
DK959018 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1023Contig1 |
Sequence |
GAGAGAGAGAGAGCCGAGTCTGGCGTTGGTCTTGGTCGTCACGACAAGATCGCGTCGCCA TAGCCCGTCGTTTCCTTCCTGCTGTCTGATCCTCGCTTTGTCTCCCGCCAATTCACCCGC GTAGAATTTGCTACCTGCCTTACTTCTCAGAAAGGCGTCCTTAACCCCCAGGAAACATGG GAAAATTCTCTGTGGAGAAGATGGAGGCCCGGCAAGCGTACCGCAATGTCTGGCACACTG ATCTCATGGGGACCATGTCTGCAGATTGCCCATATTTCTGCTTTGCCCTTTGGTGCTCGC CATGTGCTTCCTATTTACTGAGAAAGAGAGCTCTCTATGATGACATGTCAAGGTATGTTT GTTGTGCTGGATATATGCCTTGCAGTGGTAGCTGTGGTGAGCGTAAATGTCCAGAATTTT GCCTTTGCACAGAGGTGTGGTGCTGCTTTGCAAACTCAGTACAATCAACCAGGTTCTTGC TGCAAGACGAGTTCAACATCCAGACAACAAAATGTGACAACTGCATCATTGGTTTTATGT TTTGTCTCCAACAAATAGCTTGCATATTCTCCATTGTGGCTGCCCTTGTTTGGAGGTGGA GAGTTAAATGAGGCTGCTGATCTTCTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A8MQ03 |
Definition |
sp|A8MQ03|CI169_HUMAN UPF0574 protein C9orf169 OS=Homo sapiens |
Align length |
36 |
Score (bit) |
33.5 |
E-value |
0.92 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q10SG5 |
Definition |
tr|Q10SG5|Q10SG5_ORYSJ Os03g0123600 protein OS=Oryza sativa subsp. japonica |
Align length |
134 |
Score (bit) |
242.0 |
E-value |
1.0e-62 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959018|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_I19, 5' (628 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q10SG5|Q10SG5_ORYSJ Os03g0123600 protein OS=Oryza sativa subs... 242 1e-62 tr|B8ALY9|B8ALY9_ORYSI Putative uncharacterized protein OS=Oryza... 242 1e-62 tr|A9NZ96|A9NZ96_PICSI Putative uncharacterized protein OS=Picea... 242 1e-62 tr|Q8W458|Q8W458_ARATH Putative uncharacterized protein OS=Arabi... 241 3e-62 tr|Q681W9|Q681W9_ARATH MRNA, , clone: RAFL21-92-I07 OS=Arabidops... 241 3e-62 tr|Q681W8|Q681W8_ARATH MRNA, , clone: RAFL21-92-L18 OS=Arabidops... 241 3e-62 tr|Q67YE3|Q67YE3_ARATH MRNA, , clone: RAFL25-03-N20 OS=Arabidops... 241 3e-62 tr|Q2V3F7|Q2V3F7_ARATH Uncharacterized protein At4g23470.3 OS=Ar... 241 3e-62 tr|B7FIY1|B7FIY1_MEDTR Putative uncharacterized protein OS=Medic... 241 3e-62 tr|A9PCV7|A9PCV7_POPTR Putative uncharacterized protein OS=Popul... 240 4e-62 tr|A9PIT6|A9PIT6_POPJC Putative uncharacterized protein OS=Popul... 240 6e-62 tr|Q8LCK6|Q8LCK6_ARATH Putative uncharacterized protein OS=Arabi... 235 2e-60 tr|B6SRY9|B6SRY9_MAIZE Putative uncharacterized protein OS=Zea m... 230 6e-59 tr|Q9FN61|Q9FN61_ARATH Gb|AAF07369.1 OS=Arabidopsis thaliana GN=... 228 2e-58 tr|Q45GG6|Q45GG6_ARATH Putative uncharacterized protein OS=Arabi... 228 2e-58 tr|A0MFL3|A0MFL3_ARATH Putative uncharacterized protein (Fragmen... 228 2e-58 tr|Q9CAJ7|Q9CAJ7_ARATH Putative uncharacterized protein T12P18.1... 227 5e-58 tr|Q8W2X9|Q8W2X9_ORYSJ Os10g0535800 protein OS=Oryza sativa subs... 224 2e-57 tr|A2Z9Q5|A2Z9Q5_ORYSI Putative uncharacterized protein OS=Oryza... 224 2e-57 tr|O81743|O81743_ARATH Putative uncharacterized protein F16G20.1... 215 2e-54 tr|A7PZM5|A7PZM5_VITVI Chromosome chr15 scaffold_40, whole genom... 194 4e-48 tr|A7QNK8|A7QNK8_VITVI Chromosome chr2 scaffold_132, whole genom... 191 4e-47 tr|A8J6S0|A8J6S0_CHLRE Predicted protein OS=Chlamydomonas reinha... 165 2e-39 tr|Q67XV0|Q67XV0_ARATH Putative uncharacterized protein At4g2348... 156 8e-37 tr|A9RTT5|A9RTT5_PHYPA Predicted protein OS=Physcomitrella paten... 155 2e-36 tr|Q45GG5|Q45GG5_ARATH Putative uncharacterized protein OS=Arabi... 151 3e-35 tr|B2WSA2|B2WSA2_9BRAS Hydroxyproline-rich glycoprotein family p... 150 5e-35 tr|Q00XH6|Q00XH6_OSTTA Homology to unknown gene OS=Ostreococcus ... 130 6e-29 tr|A4S640|A4S640_OSTLU Predicted protein (Fragment) OS=Ostreococ... 121 3e-26 tr|A9VCT8|A9VCT8_MONBE Predicted protein (Fragment) OS=Monosiga ... 96 1e-18
>tr|Q10SG5|Q10SG5_ORYSJ Os03g0123600 protein OS=Oryza sativa subsp. japonica GN=Os03g0123600 PE=2 SV=1 Length = 274
Score = 242 bits (618), Expect = 1e-62 Identities = 106/134 (79%), Positives = 119/134 (88%) Frame = +3
Query: 189 SVEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRYVCCA 368 +++KM+ RQ+YRN+WH+DL T+ AD PY C ALWC PC SY+LRKRALY+DMSRYVCCA Sbjct: 7 NLDKMQLRQSYRNLWHSDLTSTIQADFPYCCLALWCGPCVSYMLRKRALYNDMSRYVCCA 66
Query: 369 GYMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGFMFCL 548 GYMPCSG CGE +CPEFCL TEV+ CF NSV STRFLLQDEFNIQTTKCDNCIIGFMFCL Sbjct: 67 GYMPCSGKCGESRCPEFCLATEVFLCFGNSVASTRFLLQDEFNIQTTKCDNCIIGFMFCL 126
Query: 549 QQIACIFSIVAALV 590 QQIACIFSIVAA+V Sbjct: 127 QQIACIFSIVAAIV 140
>tr|B8ALY9|B8ALY9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09791 PE=4 SV=1 Length = 274
Score = 242 bits (618), Expect = 1e-62 Identities = 106/134 (79%), Positives = 119/134 (88%) Frame = +3
Query: 189 SVEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRYVCCA 368 +++KM+ RQ+YRN+WH+DL T+ AD PY C ALWC PC SY+LRKRALY+DMSRYVCCA Sbjct: 7 NLDKMQLRQSYRNLWHSDLTNTIQADFPYCCLALWCGPCVSYMLRKRALYNDMSRYVCCA 66
Query: 369 GYMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGFMFCL 548 GYMPCSG CGE +CPEFCL TEV+ CF NSV STRFLLQDEFNIQTTKCDNCIIGFMFCL Sbjct: 67 GYMPCSGKCGESRCPEFCLATEVFLCFGNSVASTRFLLQDEFNIQTTKCDNCIIGFMFCL 126
Query: 549 QQIACIFSIVAALV 590 QQIACIFSIVAA+V Sbjct: 127 QQIACIFSIVAAIV 140
>tr|A9NZ96|A9NZ96_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 257
Score = 242 bits (618), Expect = 1e-62 Identities = 106/133 (79%), Positives = 120/133 (90%) Frame = +3
Query: 192 VEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRYVCCAG 371 VEKM+ RQ YRN+WHTDL+ T++AD PY CF+L+C PC SYLLRKRALY+DMSRYVCCAG Sbjct: 7 VEKMQLRQQYRNLWHTDLLHTITADTPYCCFSLFCGPCVSYLLRKRALYNDMSRYVCCAG 66
Query: 372 YMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGFMFCLQ 551 YMPCSGSCGE +CPE CLCTEV+CCF NSV STRFLLQDEFNIQTT+CDNCIIGFMF LQ Sbjct: 67 YMPCSGSCGESRCPELCLCTEVFCCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMFFLQ 126
Query: 552 QIACIFSIVAALV 590 Q+ACIFSI+A +V Sbjct: 127 QLACIFSIIACIV 139
>tr|Q8W458|Q8W458_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana GN=F16G20.170:F16G20.180 PE=2 SV=1 Length = 255
Score = 241 bits (615), Expect = 3e-62 Identities = 108/138 (78%), Positives = 118/138 (85%) Frame = +3
Query: 177 MGKFSVEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRY 356 M K +EKME R+ +RNVWHTDL ++ D PY CFALWC+PCASYLLRKRALYDDMSRY Sbjct: 1 MPKQDMEKMELRKNFRNVWHTDLTHSIQNDTPYCCFALWCAPCASYLLRKRALYDDMSRY 60
Query: 357 VCCAGYMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGF 536 VCCAGYMPCSG CGE KCP+ CL TEV+CCFANSV STRFLLQDEF IQTTKCDNCIIGF Sbjct: 61 VCCAGYMPCSGRCGEAKCPQLCLATEVFCCFANSVASTRFLLQDEFQIQTTKCDNCIIGF 120
Query: 537 MFCLQQIACIFSIVAALV 590 M CL Q+ACIFSIVA +V Sbjct: 121 MVCLSQVACIFSIVACIV 138
>tr|Q681W9|Q681W9_ARATH MRNA, , clone: RAFL21-92-I07 OS=Arabidopsis thaliana PE=2 SV=1 Length = 255
Score = 241 bits (615), Expect = 3e-62 Identities = 108/138 (78%), Positives = 118/138 (85%) Frame = +3
Query: 177 MGKFSVEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRY 356 M K +EKME R+ +RNVWHTDL ++ D PY CFALWC+PCASYLLRKRALYDDMSRY Sbjct: 1 MPKQDMEKMELRKNFRNVWHTDLTHSIQNDTPYCCFALWCAPCASYLLRKRALYDDMSRY 60
Query: 357 VCCAGYMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGF 536 VCCAGYMPCSG CGE KCP+ CL TEV+CCFANSV STRFLLQDEF IQTTKCDNCIIGF Sbjct: 61 VCCAGYMPCSGRCGEAKCPQLCLATEVFCCFANSVASTRFLLQDEFQIQTTKCDNCIIGF 120
Query: 537 MFCLQQIACIFSIVAALV 590 M CL Q+ACIFSIVA +V Sbjct: 121 MVCLSQVACIFSIVACIV 138
>tr|Q681W8|Q681W8_ARATH MRNA, , clone: RAFL21-92-L18 OS=Arabidopsis thaliana PE=2 SV=1 Length = 255
Score = 241 bits (615), Expect = 3e-62 Identities = 108/138 (78%), Positives = 118/138 (85%) Frame = +3
Query: 177 MGKFSVEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRY 356 M K +EKME R+ +RNVWHTDL ++ D PY CFALWC+PCASYLLRKRALYDDMSRY Sbjct: 1 MPKQDMEKMELRKNFRNVWHTDLTHSIQNDTPYCCFALWCAPCASYLLRKRALYDDMSRY 60
Query: 357 VCCAGYMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGF 536 VCCAGYMPCSG CGE KCP+ CL TEV+CCFANSV STRFLLQDEF IQTTKCDNCIIGF Sbjct: 61 VCCAGYMPCSGRCGEAKCPQLCLATEVFCCFANSVASTRFLLQDEFQIQTTKCDNCIIGF 120
Query: 537 MFCLQQIACIFSIVAALV 590 M CL Q+ACIFSIVA +V Sbjct: 121 MVCLSQVACIFSIVACIV 138
>tr|Q67YE3|Q67YE3_ARATH MRNA, , clone: RAFL25-03-N20 OS=Arabidopsis thaliana PE=2 SV=1 Length = 255
Score = 241 bits (615), Expect = 3e-62 Identities = 108/138 (78%), Positives = 118/138 (85%) Frame = +3
Query: 177 MGKFSVEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRY 356 M K +EKME R+ +RNVWHTDL ++ D PY CFALWC+PCASYLLRKRALYDDMSRY Sbjct: 1 MPKQDMEKMELRKNFRNVWHTDLTHSIQNDTPYCCFALWCAPCASYLLRKRALYDDMSRY 60
Query: 357 VCCAGYMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGF 536 VCCAGYMPCSG CGE KCP+ CL TEV+CCFANSV STRFLLQDEF IQTTKCDNCIIGF Sbjct: 61 VCCAGYMPCSGRCGEAKCPQLCLATEVFCCFANSVASTRFLLQDEFQIQTTKCDNCIIGF 120
Query: 537 MFCLQQIACIFSIVAALV 590 M CL Q+ACIFSIVA +V Sbjct: 121 MVCLSQVACIFSIVACIV 138
>tr|Q2V3F7|Q2V3F7_ARATH Uncharacterized protein At4g23470.3 OS=Arabidopsis thaliana GN=At4g23470 PE=4 SV=1 Length = 233
Score = 241 bits (615), Expect = 3e-62 Identities = 108/138 (78%), Positives = 118/138 (85%) Frame = +3
Query: 177 MGKFSVEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRY 356 M K +EKME R+ +RNVWHTDL ++ D PY CFALWC+PCASYLLRKRALYDDMSRY Sbjct: 1 MPKQDMEKMELRKNFRNVWHTDLTHSIQNDTPYCCFALWCAPCASYLLRKRALYDDMSRY 60
Query: 357 VCCAGYMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGF 536 VCCAGYMPCSG CGE KCP+ CL TEV+CCFANSV STRFLLQDEF IQTTKCDNCIIGF Sbjct: 61 VCCAGYMPCSGRCGEAKCPQLCLATEVFCCFANSVASTRFLLQDEFQIQTTKCDNCIIGF 120
Query: 537 MFCLQQIACIFSIVAALV 590 M CL Q+ACIFSIVA +V Sbjct: 121 MVCLSQVACIFSIVACIV 138
>tr|B7FIY1|B7FIY1_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 263
Score = 241 bits (614), Expect = 3e-62 Identities = 105/134 (78%), Positives = 116/134 (86%) Frame = +3
Query: 189 SVEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRYVCCA 368 ++EKM+ RQ YRN+WHTDLM T+ D PY C +LWC+PC SYLLRKRALYDDMSRY CCA Sbjct: 6 NLEKMQLRQNYRNLWHTDLMRTIQVDTPYCCLSLWCAPCVSYLLRKRALYDDMSRYTCCA 65
Query: 369 GYMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGFMFCL 548 GYMPCSG CGE KCPEFCLCTEV+ CF NSV STRFLLQDEFNIQTT+CDNCIIGFM CL Sbjct: 66 GYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMLCL 125
Query: 549 QQIACIFSIVAALV 590 Q+ACIFSIVA +V Sbjct: 126 NQVACIFSIVAMIV 139
>tr|A9PCV7|A9PCV7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 253
Score = 240 bits (613), Expect = 4e-62 Identities = 105/133 (78%), Positives = 116/133 (87%) Frame = +3
Query: 192 VEKMEARQAYRNVWHTDLMGTMSADCPYFCFALWCSPCASYLLRKRALYDDMSRYVCCAG 371 ++KM+ RQ YRN+WHTDLMGT+ AD PY C A WC PC SYLLRKRALY+DMSRYVCCAG Sbjct: 7 LDKMQLRQNYRNLWHTDLMGTIKADAPYCCLAFWCGPCVSYLLRKRALYNDMSRYVCCAG 66
Query: 372 YMPCSGSCGERKCPEFCLCTEVWCCFANSVQSTRFLLQDEFNIQTTKCDNCIIGFMFCLQ 551 YMPCSG CGE +CPE CL TEV+ CF NSV STRF+LQDEFNIQTT+CDNCIIGFMFCLQ Sbjct: 67 YMPCSGRCGESRCPELCLATEVFLCFGNSVASTRFMLQDEFNIQTTRCDNCIIGFMFCLQ 126
Query: 552 QIACIFSIVAALV 590 QIACIFSIVA +V Sbjct: 127 QIACIFSIVAMIV 139
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