DK959025
Clone id TST39A01NGRL0003_J02
Library
Length 691
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_J02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CATCTACAGACGTCGAGAGGGCAAGGCCAGCTAATGGTGGAGGTTGAATGGAAGATAGCT
TCGTTGACACAGGTGCACTAGAAGAGCCCTCTTATCTTCAGCTTCAACTTCATCGCCACT
ACCTCGACCACTACTATCACCCGGCCTTTCTAAGGGCATTTCCATGGCTACTCACAGTCT
TGTCAGCCAACCTGCTGCATTACAGCTCCCTCTTGCAAGCACGAGCGCATGCGCGAAGGT
TGGCGATGGACTCACCCCCACCGCTCTCTTTCACCCTCATGAACTCCCCTTCCATGCGCT
TGGTACGCTACAAAATCAAGCTCCTCAGGTACTCTGCAACCCTGATCTTCTTTCTTCTGT
TTTGGTCTTTCATACCCGAGATTGCGGTCCCCTTGGAAATGGGTTGGGGCACCATTGAAG
CCTCCATTGTGGGCCTCCTTGCCGGCTTCATCACCATCTACTTGAACGAGAACATGGCCC
TTAATATGAGAAATCCATGGAAACCCGCCATCGATTTTCAGTTGGCAAGCTATGGTTGCA
TGTGGGATATGTTGAGGCTTTTCGGTGCAACCCTGTTGGTCCCCTTTGAAGAGGAGCTGT
TCTACCATTCTTGGCTATACAGATACTTGTGCCAGCTTGTGAGCAGAGAGCGGCACTACG
GTAGCTTTATGGATGTGCCCTTTCATGAATG
■■Homology search results ■■ -
sp_hit_id Q00203
Definition sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101 OS=Aspergillus niger
Align length 62
Score (bit) 33.5
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959025|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_J02, 5'
(691 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM10... 33 1.1
sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo sa... 28 1.5
sp|A4XI01|MRAY_CALS8 Phospho-N-acetylmuramoyl-pentapeptide-trans... 33 1.9
sp|Q80SU6|NPT2C_MOUSE Sodium-dependent phosphate transport prote... 32 2.4
sp|Q8BZ97|PRDM8_MOUSE PR domain zinc finger protein 8 OS=Mus mus... 32 4.2
sp|Q0DK16|NIP13_ORYSJ Aquaporin NIP1-3 OS=Oryza sativa subsp. ja... 32 4.2
sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo sa... 27 5.2
sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo sa... 27 5.4
sp|Q5ZL54|K0907_CHICK UPF0469 protein KIAA0907 homolog OS=Gallus... 31 7.1
sp|P43268|ETV4_HUMAN ETS translocation variant 4 OS=Homo sapiens... 30 9.3
sp|Q9Y3E5|PTH2_HUMAN Peptidyl-tRNA hydrolase 2, mitochondrial OS... 30 9.4
sp|Q9RT91|GUAA_DEIRA GMP synthase [glutamine-hydrolyzing] OS=Dei... 30 9.4

>sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101
OS=Aspergillus niger GN=PACC PE=2 SV=1
Length = 667

Score = 33.5 bits (75), Expect = 1.1
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1

Query: 424 EASMVPQPISKGTAISGMKDQNRRKKIRVAEYLRSLIL*RTKRMEGEFMRVKESGGGESI 245
EA + T ++ D +K+R+ EYLR+ I R +R GEF ESGGG S
Sbjct: 552 EAEATLRTAQAATEVAERADVQWVEKVRLIEYLRNYIASRLER--GEFEN-NESGGGNSS 608

Query: 244 AN 239
+N
Sbjct: 609 SN 610


>sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo
sapiens GN=KRTAP10-7 PE=2 SV=2
Length = 375

Score = 28.5 bits (62), Expect(2) = 1.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1

Query: 181 CQPTCCITAPSC 216
C+PTCC+ PSC
Sbjct: 322 CRPTCCVPVPSC 333



Score = 23.1 bits (48), Expect(2) = 1.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1

Query: 178 SCQPTCCITA 207
SCQP CC T+
Sbjct: 297 SCQPACCTTS 306


>sp|A4XI01|MRAY_CALS8
Phospho-N-acetylmuramoyl-pentapeptide-transferase
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=mraY PE=3 SV=1
Length = 318

Score = 32.7 bits (73), Expect = 1.9
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = +3

Query: 321 LLRYSATLIFFLLFWSFIPEIAVPLEMGWGTIEASIVGLLAGFITIYLNENMALNMRNPW 500
L+ Y + LI LLF+ P+I PL ++G + F+ + L ++ L R
Sbjct: 57 LVIYLSILITSLLFYKKYPQIGAPLVC---ASAFGLIGFIDDFVKVVLKRSLGLRARE-- 111

Query: 501 KPAIDFQLASYGCMWDMLRLFGATLLVPFEEELFYHSWLY 620
K + F L S ++ + + G + +P SW Y
Sbjct: 112 KLVLQF-LISITFLYIVKKYLGTDVYIPILNRYVDLSWAY 150


>sp|Q80SU6|NPT2C_MOUSE Sodium-dependent phosphate transport protein
2C OS=Mus musculus GN=Slc34a3 PE=1 SV=1
Length = 601

Score = 32.3 bits (72), Expect = 2.4
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3

Query: 342 LIFFLLFWSFIPEIAVPLEMGWGTIEASIVGLLAGFITIYLNENMALNMRNPWKP 506
+++ LL + +P A L + GT+ A++ G L G + + + N+ R W P
Sbjct: 491 IVYLLLTFLLLPLAAFGLSLAGGTVLAAVGGPLVGLVLLIILVNVLQQHRPSWLP 545


>sp|Q8BZ97|PRDM8_MOUSE PR domain zinc finger protein 8 OS=Mus
musculus GN=Prdm8 PE=2 SV=1
Length = 687

Score = 31.6 bits (70), Expect = 4.2
Identities = 13/73 (17%), Positives = 33/73 (45%)
Frame = -3

Query: 545 PHATIACQLKIDGGFPWISHIKGHVLVQVDGDEAGKEAHNGGFNGAPTHFQGDRNLGYER 366
P+ + C + FP+++H++ ++ +A + GG G H G ++
Sbjct: 153 PYTCLECSQRFQFEFPYVAHLRFRCPKRLHSTDANPQDEQGGGLGTKDHGGGGGGKEQQQ 212

Query: 365 PKQKKEDQGCRVP 327
+Q+++ + +P
Sbjct: 213 QQQQQQQEAPLIP 225


>sp|Q0DK16|NIP13_ORYSJ Aquaporin NIP1-3 OS=Oryza sativa subsp.
japonica GN=NIP1-3 PE=3 SV=2
Length = 286

Score = 31.6 bits (70), Expect = 4.2
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -3

Query: 509 GGFPWISHIKGHVLVQVDGDEAGKEAHNGGFNGAPTHFQGDRNLG 375
G FPW + + QV G A A F GAP HF G G
Sbjct: 124 GRFPW-RRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAG 167


>sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo
sapiens GN=KRTAP10-4 PE=2 SV=1
Length = 401

Score = 26.6 bits (57), Expect(2) = 5.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1

Query: 181 CQPTCCITAPSC 216
C+P CC+ PSC
Sbjct: 369 CRPACCVPVPSC 380



Score = 23.1 bits (48), Expect(2) = 5.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1

Query: 178 SCQPTCCITA 207
SCQP CC T+
Sbjct: 344 SCQPACCTTS 353


>sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo
sapiens GN=KRTAP10-8 PE=2 SV=2
Length = 259

Score = 26.6 bits (57), Expect(2) = 5.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1

Query: 181 CQPTCCITAPSC 216
C+P CC+ PSC
Sbjct: 217 CRPACCVPVPSC 228



Score = 23.1 bits (48), Expect(2) = 5.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1

Query: 178 SCQPTCCITA 207
SCQP CC T+
Sbjct: 192 SCQPACCTTS 201


>sp|Q5ZL54|K0907_CHICK UPF0469 protein KIAA0907 homolog OS=Gallus
gallus GN=RCJMB04_7l9 PE=2 SV=1
Length = 619

Score = 30.8 bits (68), Expect = 7.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -3

Query: 482 KGHVLVQVDGDEAGKEAHNGGFNGAPTHFQGDRNLGYERPKQKK 351
KG LV GD + +E +GG A T QG +LGY+ P ++
Sbjct: 565 KGFGLVAYAGDSSDEEEEHGGHKNASTFSQG-WSLGYQYPSSQQ 607


>sp|P43268|ETV4_HUMAN ETS translocation variant 4 OS=Homo sapiens
GN=ETV4 PE=1 SV=3
Length = 484

Score = 30.4 bits (67), Expect = 9.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3

Query: 431 HNGGFNGAPTHFQGDRNLGYERPKQKKEDQGCRVPEELD 315
H GF+G P+ G GYE+P + D C VPE+ +
Sbjct: 281 HTEGFSG-PSPGDGAMGYGYEKPLRPFPDDVCVVPEKFE 318


tr_hit_id A9TS26
Definition tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 209
Score (bit) 162.0
E-value 2.0e-38
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959025|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_J02, 5'
(691 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella paten... 162 2e-38
tr|B2EV50|B2EV50_9BACT CAAX prenyl protease-related protein OS=b... 50 1e-04
tr|B5EA75|B5EA75_GEOBB CAAX prenyl protease-related protein OS=G... 39 0.31
tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5 OS... 39 0.31
tr|A5G429|A5G429_GEOUR Abortive infection protein OS=Geobacter u... 37 1.5
tr|A1VI31|A1VI31_DESVV Abortive infection protein OS=Desulfovibr... 36 2.6
tr|O01863|O01863_CAEEL Putative uncharacterized protein OS=Caeno... 36 2.7
tr|Q314M1|Q314M1_DESDG CAAX amino terminal protease family prote... 35 3.4
tr|Q1K3X4|Q1K3X4_DESAC Abortive infection protein OS=Desulfuromo... 35 3.4
tr|B7DDD1|B7DDD1_DESSA Phosphate ABC transporter, inner membrane... 35 3.4
tr|A3U1Z9|A3U1Z9_9RHOB CAAX amino terminal protease family prote... 35 4.5
tr|A7RY52|A7RY52_NEMVE Predicted protein OS=Nematostella vectens... 35 4.5
tr|Q74BQ0|Q74BQ0_GEOSL CAAX amino terminal protease family prote... 35 5.8
tr|A3SQB3|A3SQB3_9RHOB CAAX amino terminal protease family prote... 35 5.8
tr|B6MMA8|B6MMA8_BRAFL Putative uncharacterized protein OS=Branc... 35 5.8
tr|Q01PN3|Q01PN3_SOLUE Abortive infection protein OS=Solibacter ... 34 7.6
tr|B2ARF5|B2ARF5_PODAN Predicted CDS Pa_4_7670 OS=Podospora anse... 34 7.7

>tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_171612 PE=4 SV=1
Length = 284

Score = 162 bits (409), Expect = 2e-38
Identities = 88/209 (42%), Positives = 117/209 (55%), Gaps = 29/209 (13%)
Frame = +3

Query: 150 LRAFPWLLTVLSANLLHY-----------------------------SSXXXXXXXXXXX 242
LR PW+LT++ ANLLHY SS
Sbjct: 9 LRITPWILTIICANLLHYRSLLDARNENRERVLAQRVTSKQQAKREASSKDAFEFMRKQA 68

Query: 243 XMDSPPPLSFTLMNSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPLEMGWGTIEA 422
L+F LM SP MR RYKIKLLRY+AT ++ L F+ FIPE+ + + ++E
Sbjct: 69 TTSKHELLTFDLMRSPIMRKARYKIKLLRYAATSVYILFFYRFIPELNEAYPVNFFSLEC 128

Query: 423 SIVGLLAGFITIYLNENMALNMRNPWKPAIDFQLASYGCMWDMLRLFGATLLVPFEEELF 602
IVG+L+G IT+YLNEN MR W+PA+DF G +WD++RL GA+L VP EEELF
Sbjct: 129 LIVGILSGLITVYLNENQDEAMRTLWRPAVDFGSGFLGDIWDVIRLVGASLAVPVEEELF 188

Query: 603 YHSWLYRYLCQLVSRERHYGSFMDVPFHE 689
YHSW+YRY+ +L+ ++ Y SF+ V F E
Sbjct: 189 YHSWMYRYILKLLHKD-EYASFVHVSFFE 216


>tr|B2EV50|B2EV50_9BACT CAAX prenyl protease-related protein
OS=bacterium Ellin514 GN=CflavDRAFT_6127 PE=4 SV=1
Length = 209

Score = 50.4 bits (119), Expect = 1e-04
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Frame = +3

Query: 258 PPLSFTLMNSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPLEMGWG-TIEASIVG 434
P L F L+ + R + ++ T++ L W P + EM W + EA +VG
Sbjct: 6 PFLVFVLLTACQDRFGEASRYWIYFAKTIVGAWLVWMTWPIVK---EMRWAFSWEAVVVG 62

Query: 435 LLAGFITIYLNENMAL--NMRNPWKPAIDFQLASYGCMWDML--RLFGATLLVPFEEELF 602
+ I + L+ PW P + F S G W + R+ G+TL+VP EE+F
Sbjct: 63 VAVFAIWVGLDPYYPKLGKAGAPWNPNVSFVQGS-GLAWFFILTRIIGSTLVVPPIEEVF 121

Query: 603 YHSWLYRYLCQLVSRERHYGSFMDVPF 683
Y S+LYRY+ + + G F + F
Sbjct: 122 YRSFLYRYIVKKDFQSVALGFFHPIAF 148


>tr|B5EA75|B5EA75_GEOBB CAAX prenyl protease-related protein
OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
DSM 16622) GN=Gbem_1765 PE=4 SV=1
Length = 237

Score = 38.9 bits (89), Expect = 0.31
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3

Query: 405 WGTIEASIVGLLAGFITIYLNENMALNMRNPWKPAIDFQLAS--YGCMWDMLRLFGATLL 578
W T+ +++GLL I+++ + + + +P L + R+ GA L+
Sbjct: 84 WRTVSVALIGLLT--FAIWVSADWVVTLASPLSGFNPMLLPDEVVRVLMTAFRVVGAVLV 141

Query: 579 VPFEEELFYHSWLYRYLCQLVSRERHYGSF 668
VP EE+F+ S+L RYL GSF
Sbjct: 142 VPIMEEVFWRSFLLRYLVDTDFESIPIGSF 171


>tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5
OS=Hutchinsoniella macracantha GN=nad5 PE=3 SV=1
Length = 578

Score = 38.9 bits (89), Expect = 0.31
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +3

Query: 261 PLSFTLM-NSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPE---IAVPLEMGWGTIEASI 428
PLS T N +++ I LL AT + LL W P I +PL M T+ I
Sbjct: 408 PLSLTCSPNDKKNKMMTSPILLLTIMATTVGSLLTWFIFPNPEMICLPLPMKTATLFTII 467

Query: 429 VGLLAGFITIYLNENMALNMRNPWKPAIDFQLASYGCMWDMLRLFGATLLV 581
+G+L G I +N+ +N+ + D MW +++ +T+ +
Sbjct: 468 LGMLLGLILSNINQKSNMNLYKKFNKYKDLS----NTMW-FMKIISSTITI 513


>tr|A5G429|A5G429_GEOUR Abortive infection protein OS=Geobacter
uraniireducens (strain Rf4) GN=Gura_2368 PE=4 SV=1
Length = 237

Score = 36.6 bits (83), Expect = 1.5
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +3

Query: 423 SIVGLLAGFITIYLNENMALNM-----RNPWKPAIDFQLASYGCMWDMLRLFGATLLVPF 587
S++ +++G + L NM N + + P+I Q +R+ GA ++VP
Sbjct: 86 SVISIISGIVVFILWINMDWNFTSHPSQQGFNPSI-LQDDRMRTSMTFVRMTGAVIIVPI 144

Query: 588 EEELFYHSWLYRYLCQLVSRERHYGSF 668
EELF+ S+L RY+ + G F
Sbjct: 145 MEELFWRSFLIRYIINQTYSKISIGQF 171


>tr|A1VI31|A1VI31_DESVV Abortive infection protein OS=Desulfovibrio
vulgaris subsp. vulgaris (strain DP4) GN=Dvul_3086 PE=4
SV=1
Length = 274

Score = 35.8 bits (81), Expect = 2.6
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3

Query: 552 LRLFGATLLVPFEEELFYHSWLYRYL 629
+R GATLLVP EELF+ S+L R+L
Sbjct: 170 IRFIGATLLVPLAEELFWRSFLLRHL 195


>tr|O01863|O01863_CAEEL Putative uncharacterized protein
OS=Caenorhabditis elegans GN=D1007.15 PE=2 SV=4
Length = 1184

Score = 35.8 bits (81), Expect = 2.7
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = -2

Query: 678 AHP*SYRSAALCSQAGTSICIAKNGRTAPLQRGPTGLHRK-----ASTYPTCNHSLPTEN 514
AHP + +QAG + + N R P + G G+H + + PT N S N
Sbjct: 359 AHPSIEKVVFATNQAGKQLLLEINWRLIPDESGTLGIHLEVMNLSSDQEPTINSSGQPSN 418

Query: 513 RWRVSMD 493
+W +SMD
Sbjct: 419 KWTLSMD 425


>tr|Q314M1|Q314M1_DESDG CAAX amino terminal protease family protein
OS=Desulfovibrio desulfuricans (strain G20) GN=Dde_0824
PE=4 SV=1
Length = 242

Score = 35.4 bits (80), Expect = 3.4
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3

Query: 552 LRLFGATLLVPFEEELFYHSWLYRYL 629
+RL GATL+VP EELF+ S+L RY+
Sbjct: 138 VRLAGATLVVPVMEELFWRSFLIRYI 163


>tr|Q1K3X4|Q1K3X4_DESAC Abortive infection protein OS=Desulfuromonas
acetoxidans DSM 684 GN=Dace_3195 PE=4 SV=1
Length = 241

Score = 35.4 bits (80), Expect = 3.4
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3

Query: 540 MWDMLRLFGATLLVPFEEELFYHSWLYRYLCQLVSRERHYGSFMDV 677
M + RLFGA L+VP EE+F+ S+L RY G+FM V
Sbjct: 133 MMVIARLFGAVLVVPVMEEIFWRSFLIRYAID--------GNFMQV 170


>tr|B7DDD1|B7DDD1_DESSA Phosphate ABC transporter, inner membrane
subunit PstC OS=Desulfovibrio salexigens DSM 2638
GN=DesalDRAFT_0921 PE=3 SV=1
Length = 450

Score = 35.4 bits (80), Expect = 3.4
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3

Query: 390 PLEMGWGTIE--ASIVGLLAGFIT-IYLNENMALNMRNPWKPAIDFQLASYGCMWDMLRL 560
PL +G GT+ +S++ + G +T IYL E L +RN KPA++ A ++
Sbjct: 222 PLIVGSGTVTMLSSLIAIPLGVMTAIYLAEIAPLKVRNIVKPAVEMLAALPSV---VIGF 278

Query: 561 FGATLLVPFEEELF 602
FG ++ PF +E F
Sbjct: 279 FGMVVVAPFLQETF 292