DK959025 |
Clone id |
TST39A01NGRL0003_J02 |
Library |
TST39 |
Length |
691 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_J02. 5' end sequence. |
Accession |
DK959025 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL293Contig1 |
Sequence |
CATCTACAGACGTCGAGAGGGCAAGGCCAGCTAATGGTGGAGGTTGAATGGAAGATAGCT TCGTTGACACAGGTGCACTAGAAGAGCCCTCTTATCTTCAGCTTCAACTTCATCGCCACT ACCTCGACCACTACTATCACCCGGCCTTTCTAAGGGCATTTCCATGGCTACTCACAGTCT TGTCAGCCAACCTGCTGCATTACAGCTCCCTCTTGCAAGCACGAGCGCATGCGCGAAGGT TGGCGATGGACTCACCCCCACCGCTCTCTTTCACCCTCATGAACTCCCCTTCCATGCGCT TGGTACGCTACAAAATCAAGCTCCTCAGGTACTCTGCAACCCTGATCTTCTTTCTTCTGT TTTGGTCTTTCATACCCGAGATTGCGGTCCCCTTGGAAATGGGTTGGGGCACCATTGAAG CCTCCATTGTGGGCCTCCTTGCCGGCTTCATCACCATCTACTTGAACGAGAACATGGCCC TTAATATGAGAAATCCATGGAAACCCGCCATCGATTTTCAGTTGGCAAGCTATGGTTGCA TGTGGGATATGTTGAGGCTTTTCGGTGCAACCCTGTTGGTCCCCTTTGAAGAGGAGCTGT TCTACCATTCTTGGCTATACAGATACTTGTGCCAGCTTGTGAGCAGAGAGCGGCACTACG GTAGCTTTATGGATGTGCCCTTTCATGAATG |
■■Homology search results ■■ |
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Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q00203 |
Definition |
sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101 OS=Aspergillus niger |
Align length |
62 |
Score (bit) |
33.5 |
E-value |
1.1 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959025|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_J02, 5' (691 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM10... 33 1.1 sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo sa... 28 1.5 sp|A4XI01|MRAY_CALS8 Phospho-N-acetylmuramoyl-pentapeptide-trans... 33 1.9 sp|Q80SU6|NPT2C_MOUSE Sodium-dependent phosphate transport prote... 32 2.4 sp|Q8BZ97|PRDM8_MOUSE PR domain zinc finger protein 8 OS=Mus mus... 32 4.2 sp|Q0DK16|NIP13_ORYSJ Aquaporin NIP1-3 OS=Oryza sativa subsp. ja... 32 4.2 sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo sa... 27 5.2 sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo sa... 27 5.4 sp|Q5ZL54|K0907_CHICK UPF0469 protein KIAA0907 homolog OS=Gallus... 31 7.1 sp|P43268|ETV4_HUMAN ETS translocation variant 4 OS=Homo sapiens... 30 9.3 sp|Q9Y3E5|PTH2_HUMAN Peptidyl-tRNA hydrolase 2, mitochondrial OS... 30 9.4 sp|Q9RT91|GUAA_DEIRA GMP synthase [glutamine-hydrolyzing] OS=Dei... 30 9.4
>sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101 OS=Aspergillus niger GN=PACC PE=2 SV=1 Length = 667
Score = 33.5 bits (75), Expect = 1.1 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = -1
Query: 424 EASMVPQPISKGTAISGMKDQNRRKKIRVAEYLRSLIL*RTKRMEGEFMRVKESGGGESI 245 EA + T ++ D +K+R+ EYLR+ I R +R GEF ESGGG S Sbjct: 552 EAEATLRTAQAATEVAERADVQWVEKVRLIEYLRNYIASRLER--GEFEN-NESGGGNSS 608
Query: 244 AN 239 +N Sbjct: 609 SN 610
>sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo sapiens GN=KRTAP10-7 PE=2 SV=2 Length = 375
Score = 28.5 bits (62), Expect(2) = 1.5 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1
Query: 181 CQPTCCITAPSC 216 C+PTCC+ PSC Sbjct: 322 CRPTCCVPVPSC 333
Score = 23.1 bits (48), Expect(2) = 1.5 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +1
Query: 178 SCQPTCCITA 207 SCQP CC T+ Sbjct: 297 SCQPACCTTS 306
>sp|A4XI01|MRAY_CALS8 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=mraY PE=3 SV=1 Length = 318
Score = 32.7 bits (73), Expect = 1.9 Identities = 25/100 (25%), Positives = 43/100 (43%) Frame = +3
Query: 321 LLRYSATLIFFLLFWSFIPEIAVPLEMGWGTIEASIVGLLAGFITIYLNENMALNMRNPW 500 L+ Y + LI LLF+ P+I PL ++G + F+ + L ++ L R Sbjct: 57 LVIYLSILITSLLFYKKYPQIGAPLVC---ASAFGLIGFIDDFVKVVLKRSLGLRARE-- 111
Query: 501 KPAIDFQLASYGCMWDMLRLFGATLLVPFEEELFYHSWLY 620 K + F L S ++ + + G + +P SW Y Sbjct: 112 KLVLQF-LISITFLYIVKKYLGTDVYIPILNRYVDLSWAY 150
>sp|Q80SU6|NPT2C_MOUSE Sodium-dependent phosphate transport protein 2C OS=Mus musculus GN=Slc34a3 PE=1 SV=1 Length = 601
Score = 32.3 bits (72), Expect = 2.4 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = +3
Query: 342 LIFFLLFWSFIPEIAVPLEMGWGTIEASIVGLLAGFITIYLNENMALNMRNPWKP 506 +++ LL + +P A L + GT+ A++ G L G + + + N+ R W P Sbjct: 491 IVYLLLTFLLLPLAAFGLSLAGGTVLAAVGGPLVGLVLLIILVNVLQQHRPSWLP 545
>sp|Q8BZ97|PRDM8_MOUSE PR domain zinc finger protein 8 OS=Mus musculus GN=Prdm8 PE=2 SV=1 Length = 687
Score = 31.6 bits (70), Expect = 4.2 Identities = 13/73 (17%), Positives = 33/73 (45%) Frame = -3
Query: 545 PHATIACQLKIDGGFPWISHIKGHVLVQVDGDEAGKEAHNGGFNGAPTHFQGDRNLGYER 366 P+ + C + FP+++H++ ++ +A + GG G H G ++ Sbjct: 153 PYTCLECSQRFQFEFPYVAHLRFRCPKRLHSTDANPQDEQGGGLGTKDHGGGGGGKEQQQ 212
Query: 365 PKQKKEDQGCRVP 327 +Q+++ + +P Sbjct: 213 QQQQQQQEAPLIP 225
>sp|Q0DK16|NIP13_ORYSJ Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2 Length = 286
Score = 31.6 bits (70), Expect = 4.2 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = -3
Query: 509 GGFPWISHIKGHVLVQVDGDEAGKEAHNGGFNGAPTHFQGDRNLG 375 G FPW + + QV G A A F GAP HF G G Sbjct: 124 GRFPW-RRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAG 167
>sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo sapiens GN=KRTAP10-4 PE=2 SV=1 Length = 401
Score = 26.6 bits (57), Expect(2) = 5.2 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +1
Query: 181 CQPTCCITAPSC 216 C+P CC+ PSC Sbjct: 369 CRPACCVPVPSC 380
Score = 23.1 bits (48), Expect(2) = 5.2 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +1
Query: 178 SCQPTCCITA 207 SCQP CC T+ Sbjct: 344 SCQPACCTTS 353
>sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo sapiens GN=KRTAP10-8 PE=2 SV=2 Length = 259
Score = 26.6 bits (57), Expect(2) = 5.4 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +1
Query: 181 CQPTCCITAPSC 216 C+P CC+ PSC Sbjct: 217 CRPACCVPVPSC 228
Score = 23.1 bits (48), Expect(2) = 5.4 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +1
Query: 178 SCQPTCCITA 207 SCQP CC T+ Sbjct: 192 SCQPACCTTS 201
>sp|Q5ZL54|K0907_CHICK UPF0469 protein KIAA0907 homolog OS=Gallus gallus GN=RCJMB04_7l9 PE=2 SV=1 Length = 619
Score = 30.8 bits (68), Expect = 7.1 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -3
Query: 482 KGHVLVQVDGDEAGKEAHNGGFNGAPTHFQGDRNLGYERPKQKK 351 KG LV GD + +E +GG A T QG +LGY+ P ++ Sbjct: 565 KGFGLVAYAGDSSDEEEEHGGHKNASTFSQG-WSLGYQYPSSQQ 607
>sp|P43268|ETV4_HUMAN ETS translocation variant 4 OS=Homo sapiens GN=ETV4 PE=1 SV=3 Length = 484
Score = 30.4 bits (67), Expect = 9.3 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3
Query: 431 HNGGFNGAPTHFQGDRNLGYERPKQKKEDQGCRVPEELD 315 H GF+G P+ G GYE+P + D C VPE+ + Sbjct: 281 HTEGFSG-PSPGDGAMGYGYEKPLRPFPDDVCVVPEKFE 318
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TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TS26 |
Definition |
tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
209 |
Score (bit) |
162.0 |
E-value |
2.0e-38 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959025|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_J02, 5' (691 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella paten... 162 2e-38 tr|B2EV50|B2EV50_9BACT CAAX prenyl protease-related protein OS=b... 50 1e-04 tr|B5EA75|B5EA75_GEOBB CAAX prenyl protease-related protein OS=G... 39 0.31 tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5 OS... 39 0.31 tr|A5G429|A5G429_GEOUR Abortive infection protein OS=Geobacter u... 37 1.5 tr|A1VI31|A1VI31_DESVV Abortive infection protein OS=Desulfovibr... 36 2.6 tr|O01863|O01863_CAEEL Putative uncharacterized protein OS=Caeno... 36 2.7 tr|Q314M1|Q314M1_DESDG CAAX amino terminal protease family prote... 35 3.4 tr|Q1K3X4|Q1K3X4_DESAC Abortive infection protein OS=Desulfuromo... 35 3.4 tr|B7DDD1|B7DDD1_DESSA Phosphate ABC transporter, inner membrane... 35 3.4 tr|A3U1Z9|A3U1Z9_9RHOB CAAX amino terminal protease family prote... 35 4.5 tr|A7RY52|A7RY52_NEMVE Predicted protein OS=Nematostella vectens... 35 4.5 tr|Q74BQ0|Q74BQ0_GEOSL CAAX amino terminal protease family prote... 35 5.8 tr|A3SQB3|A3SQB3_9RHOB CAAX amino terminal protease family prote... 35 5.8 tr|B6MMA8|B6MMA8_BRAFL Putative uncharacterized protein OS=Branc... 35 5.8 tr|Q01PN3|Q01PN3_SOLUE Abortive infection protein OS=Solibacter ... 34 7.6 tr|B2ARF5|B2ARF5_PODAN Predicted CDS Pa_4_7670 OS=Podospora anse... 34 7.7
>tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_171612 PE=4 SV=1 Length = 284
Score = 162 bits (409), Expect = 2e-38 Identities = 88/209 (42%), Positives = 117/209 (55%), Gaps = 29/209 (13%) Frame = +3
Query: 150 LRAFPWLLTVLSANLLHY-----------------------------SSXXXXXXXXXXX 242 LR PW+LT++ ANLLHY SS Sbjct: 9 LRITPWILTIICANLLHYRSLLDARNENRERVLAQRVTSKQQAKREASSKDAFEFMRKQA 68
Query: 243 XMDSPPPLSFTLMNSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPLEMGWGTIEA 422 L+F LM SP MR RYKIKLLRY+AT ++ L F+ FIPE+ + + ++E Sbjct: 69 TTSKHELLTFDLMRSPIMRKARYKIKLLRYAATSVYILFFYRFIPELNEAYPVNFFSLEC 128
Query: 423 SIVGLLAGFITIYLNENMALNMRNPWKPAIDFQLASYGCMWDMLRLFGATLLVPFEEELF 602 IVG+L+G IT+YLNEN MR W+PA+DF G +WD++RL GA+L VP EEELF Sbjct: 129 LIVGILSGLITVYLNENQDEAMRTLWRPAVDFGSGFLGDIWDVIRLVGASLAVPVEEELF 188
Query: 603 YHSWLYRYLCQLVSRERHYGSFMDVPFHE 689 YHSW+YRY+ +L+ ++ Y SF+ V F E Sbjct: 189 YHSWMYRYILKLLHKD-EYASFVHVSFFE 216
>tr|B2EV50|B2EV50_9BACT CAAX prenyl protease-related protein OS=bacterium Ellin514 GN=CflavDRAFT_6127 PE=4 SV=1 Length = 209
Score = 50.4 bits (119), Expect = 1e-04 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 5/147 (3%) Frame = +3
Query: 258 PPLSFTLMNSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPLEMGWG-TIEASIVG 434 P L F L+ + R + ++ T++ L W P + EM W + EA +VG Sbjct: 6 PFLVFVLLTACQDRFGEASRYWIYFAKTIVGAWLVWMTWPIVK---EMRWAFSWEAVVVG 62
Query: 435 LLAGFITIYLNENMAL--NMRNPWKPAIDFQLASYGCMWDML--RLFGATLLVPFEEELF 602 + I + L+ PW P + F S G W + R+ G+TL+VP EE+F Sbjct: 63 VAVFAIWVGLDPYYPKLGKAGAPWNPNVSFVQGS-GLAWFFILTRIIGSTLVVPPIEEVF 121
Query: 603 YHSWLYRYLCQLVSRERHYGSFMDVPF 683 Y S+LYRY+ + + G F + F Sbjct: 122 YRSFLYRYIVKKDFQSVALGFFHPIAF 148
>tr|B5EA75|B5EA75_GEOBB CAAX prenyl protease-related protein OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=Gbem_1765 PE=4 SV=1 Length = 237
Score = 38.9 bits (89), Expect = 0.31 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Frame = +3
Query: 405 WGTIEASIVGLLAGFITIYLNENMALNMRNPWKPAIDFQLAS--YGCMWDMLRLFGATLL 578 W T+ +++GLL I+++ + + + +P L + R+ GA L+ Sbjct: 84 WRTVSVALIGLLT--FAIWVSADWVVTLASPLSGFNPMLLPDEVVRVLMTAFRVVGAVLV 141
Query: 579 VPFEEELFYHSWLYRYLCQLVSRERHYGSF 668 VP EE+F+ S+L RYL GSF Sbjct: 142 VPIMEEVFWRSFLLRYLVDTDFESIPIGSF 171
>tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5 OS=Hutchinsoniella macracantha GN=nad5 PE=3 SV=1 Length = 578
Score = 38.9 bits (89), Expect = 0.31 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%) Frame = +3
Query: 261 PLSFTLM-NSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPE---IAVPLEMGWGTIEASI 428 PLS T N +++ I LL AT + LL W P I +PL M T+ I Sbjct: 408 PLSLTCSPNDKKNKMMTSPILLLTIMATTVGSLLTWFIFPNPEMICLPLPMKTATLFTII 467
Query: 429 VGLLAGFITIYLNENMALNMRNPWKPAIDFQLASYGCMWDMLRLFGATLLV 581 +G+L G I +N+ +N+ + D MW +++ +T+ + Sbjct: 468 LGMLLGLILSNINQKSNMNLYKKFNKYKDLS----NTMW-FMKIISSTITI 513
>tr|A5G429|A5G429_GEOUR Abortive infection protein OS=Geobacter uraniireducens (strain Rf4) GN=Gura_2368 PE=4 SV=1 Length = 237
Score = 36.6 bits (83), Expect = 1.5 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%) Frame = +3
Query: 423 SIVGLLAGFITIYLNENMALNM-----RNPWKPAIDFQLASYGCMWDMLRLFGATLLVPF 587 S++ +++G + L NM N + + P+I Q +R+ GA ++VP Sbjct: 86 SVISIISGIVVFILWINMDWNFTSHPSQQGFNPSI-LQDDRMRTSMTFVRMTGAVIIVPI 144
Query: 588 EEELFYHSWLYRYLCQLVSRERHYGSF 668 EELF+ S+L RY+ + G F Sbjct: 145 MEELFWRSFLIRYIINQTYSKISIGQF 171
>tr|A1VI31|A1VI31_DESVV Abortive infection protein OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=Dvul_3086 PE=4 SV=1 Length = 274
Score = 35.8 bits (81), Expect = 2.6 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +3
Query: 552 LRLFGATLLVPFEEELFYHSWLYRYL 629 +R GATLLVP EELF+ S+L R+L Sbjct: 170 IRFIGATLLVPLAEELFWRSFLLRHL 195
>tr|O01863|O01863_CAEEL Putative uncharacterized protein OS=Caenorhabditis elegans GN=D1007.15 PE=2 SV=4 Length = 1184
Score = 35.8 bits (81), Expect = 2.7 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Frame = -2
Query: 678 AHP*SYRSAALCSQAGTSICIAKNGRTAPLQRGPTGLHRK-----ASTYPTCNHSLPTEN 514 AHP + +QAG + + N R P + G G+H + + PT N S N Sbjct: 359 AHPSIEKVVFATNQAGKQLLLEINWRLIPDESGTLGIHLEVMNLSSDQEPTINSSGQPSN 418
Query: 513 RWRVSMD 493 +W +SMD Sbjct: 419 KWTLSMD 425
>tr|Q314M1|Q314M1_DESDG CAAX amino terminal protease family protein OS=Desulfovibrio desulfuricans (strain G20) GN=Dde_0824 PE=4 SV=1 Length = 242
Score = 35.4 bits (80), Expect = 3.4 Identities = 16/26 (61%), Positives = 21/26 (80%) Frame = +3
Query: 552 LRLFGATLLVPFEEELFYHSWLYRYL 629 +RL GATL+VP EELF+ S+L RY+ Sbjct: 138 VRLAGATLVVPVMEELFWRSFLIRYI 163
>tr|Q1K3X4|Q1K3X4_DESAC Abortive infection protein OS=Desulfuromonas acetoxidans DSM 684 GN=Dace_3195 PE=4 SV=1 Length = 241
Score = 35.4 bits (80), Expect = 3.4 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +3
Query: 540 MWDMLRLFGATLLVPFEEELFYHSWLYRYLCQLVSRERHYGSFMDV 677 M + RLFGA L+VP EE+F+ S+L RY G+FM V Sbjct: 133 MMVIARLFGAVLVVPVMEEIFWRSFLIRYAID--------GNFMQV 170
>tr|B7DDD1|B7DDD1_DESSA Phosphate ABC transporter, inner membrane subunit PstC OS=Desulfovibrio salexigens DSM 2638 GN=DesalDRAFT_0921 PE=3 SV=1 Length = 450
Score = 35.4 bits (80), Expect = 3.4 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Frame = +3
Query: 390 PLEMGWGTIE--ASIVGLLAGFIT-IYLNENMALNMRNPWKPAIDFQLASYGCMWDMLRL 560 PL +G GT+ +S++ + G +T IYL E L +RN KPA++ A ++ Sbjct: 222 PLIVGSGTVTMLSSLIAIPLGVMTAIYLAEIAPLKVRNIVKPAVEMLAALPSV---VIGF 278
Query: 561 FGATLLVPFEEELF 602 FG ++ PF +E F Sbjct: 279 FGMVVVAPFLQETF 292
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