DK959026 [AcEST]

DK959026
Clone id	TST39A01NGRL0003_J03
Library	TST39
Length	687
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_J03. 5' end sequence.
Accession	DK959026
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL623Contig1
Sequence	GCGAGCTTCTAATCGGCTGGGAAGCCCCACTGCGCGTGCACTTACTCTAATCTCGACTCC TCAGAACAGCTCGATCAGCCTTGATTACTATTGGGCTCTTTCAGTCCACAGAAATTCCAT GTATGAGGTCTTTCAGCTCAATTGGGTTCGGTAATTGATCGGTGAAGCTGCCCCTTCAAG CTTAATTATGGTACTCTCAGCATGAGTACGGTAAGGTGTGATTAGCAGGACCTTATTACC CACATGAAGTAGTAGGTTCAGGCTAAATACATAAAACCAGAGAGGTCAACAATTTGGCAT CATGGGATCAACCTGTGCTGGCGTGCAATCCACCATGCCTAGAAGCCGCTTTGTGAAGCC GTACGTGGAAGCCCCCCGCCAAGTGATCGGCTTCGACTTGTCGCCCAAAGGAGGAAAATC GGAGGCAGTACTTATACCTGCCGATACTGATGATGATGATGTATGTAGGATCGATCCAAG TGCAGTGATACACTCTAATTGCATGAATTCATGTTCAATTAGCTCCAAAACAGCTACCCA CAAGGGTAAAAGCACCACTGTCACCTCCCCAAGATCTGCGCTACAGCAGCTGCTGCTTCC TCCCCTCCTTCAATCAGAGCCAGCAGCCAAAGCTTGTGGCCTCTCACACGGACCCTTGCT TCCAGCACCTATCTGCAAATCCCAATT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK959026\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_J03, 5' (687 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A7I9G8
Definition	tr\|A7I9G8\|A7I9G8_METB6 ABC transporter related OS=Methanoregula boonei (strain 6A8)
Align length	67
Score (bit)	34.3
E-value	7.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK959026\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_J03, 5' (687 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A7I9G8\|A7I9G8_METB6 ABC transporter related OS=Methanoregula ... 34 7.7 >tr\|A7I9G8\|A7I9G8_METB6 ABC transporter related OS=Methanoregula boonei (strain 6A8) GN=Mboo_1864 PE=3 SV=1 Length = 303 Score = 34.3 bits (77), Expect = 7.7 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Frame = +2 Query: 278 QRGQQFGIMGSTCAGVQSTMPRSRFVKPYVEAPRQVIGFD--LSPKGGKSEAVLIPADT- 448 ++G+ FG +G AG +TM V P +V G D ++P G K ++P +T Sbjct: 28 KKGEIFGFLGPNGAGKTTTMRMIECVSPRTSGTLRVFGMDPEVNPAGIKQRIGVVPQETN 87 Query: 449 -DDDDVC 466 D D C Sbjct: 88 LDPDFTC 94