DK959040 |
Clone id |
TST39A01NGRL0003_J18 |
Library |
TST39 |
Length |
645 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_J18. 5' end sequence. |
Accession |
DK959040 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1935Contig1 |
Sequence |
GACAGCAGAAGAAAGACACAATAGGCAACAAGTGGTACAACCTGTCTGCCCCGACAATCA CTCCTGAACTCAAAAAGGAGCTCCAGATTGTGAAGCTTCGTGGCGTTTTAGATCCAAAAA GGCATTACAAAGCTGAAGACTCCAAGGGGCTTCCTAAATACTTCCAAGTTGGTACAGTGA TTGGAGGTCCAGCAGATTTTTACTCTGGAAGATTGACGAAGAAAGAACAAAAGAACTCCC TCGCCAATGAACTCCTTTCAAATACTTCGCTTTCTAACTACAGGAAACGAAAATACCTTG AGATTCAAGATCAAAAGCAGGCAGGGGGAAAAGGATTTATGAAAAAAAAGAAAATGAAGA GAACTCCAGCATGGGCTAAGATTTAGGGGATCTACTTTTGCAGCCTGCTCATGATTCCAG GGAACGTTGAAGTCATTCTCCCAGGTCCCTTTTTTTGAGCAGTATGAAGGCCACTCTAAT CAATAAATTGGTTGCACTATTTTCATTCTAGAGGAGGCTCCCTGCTCCCTTTGCAATAGA GCTCGTGTTATTCTAAGCTTTGTAAGGTCTCTTTCTTGGAACCAACACCAAGGCATCATT CAAAGGCAATTTCCATTTTCACTAANAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0P5H2 |
Definition |
sp|Q0P5H2|TDIF2_BOVIN Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus |
Align length |
107 |
Score (bit) |
114.0 |
E-value |
3.0e-25 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SWQ7 |
Definition |
tr|A9SWQ7|A9SWQ7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
103 |
Score (bit) |
162.0 |
E-value |
1.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959040|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_J18, 5' (623 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SWQ7|A9SWQ7_PHYPA Predicted protein (Fragment) OS=Physcomit... 162 1e-38 tr|A9NVE7|A9NVE7_PICSI Putative uncharacterized protein OS=Picea... 147 4e-34 tr|A7NVY9|A7NVY9_VITVI Chromosome chr5 scaffold_2, whole genome ... 140 5e-32 tr|B7FIY2|B7FIY2_MEDTR Putative uncharacterized protein OS=Medic... 136 9e-31 tr|A7SNR9|A7SNR9_NEMVE Predicted protein (Fragment) OS=Nematoste... 136 1e-30 tr|A9PHG8|A9PHG8_POPTR Putative uncharacterized protein OS=Popul... 130 5e-29 tr|Q6YWQ2|Q6YWQ2_ORYSJ Os02g0730500 protein OS=Oryza sativa subs... 126 9e-28 tr|A2X988|A2X988_ORYSI Putative uncharacterized protein OS=Oryza... 126 9e-28 tr|B6TJ58|B6TJ58_MAIZE Putative uncharacterized protein OS=Zea m... 122 2e-26 tr|B6TCJ0|B6TCJ0_MAIZE Putative uncharacterized protein OS=Zea m... 122 2e-26 tr|O42877|O42877_SCHPO rRNA processing protein Fcf2 (Predicted) ... 119 1e-25 tr|Q6CFV8|Q6CFV8_YARLI YALI0B03278p OS=Yarrowia lipolytica GN=YA... 118 3e-25 tr|A8WHP5|A8WHP5_DANRE Novel protein similar to vertebrate deoxy... 113 8e-24 tr|A5PL49|A5PL49_DANRE Dnttip2 protein (Fragment) OS=Danio rerio... 113 8e-24 tr|A1L2E3|A1L2E3_DANRE Dnttip2 protein (Fragment) OS=Danio rerio... 113 8e-24 tr|Q3E8T7|Q3E8T7_ARATH Uncharacterized protein At5g30495.2 (Unch... 113 8e-24 tr|A9UM07|A9UM07_XENLA LOC100137666 protein (Fragment) OS=Xenopu... 111 3e-23 tr|B1H3A4|B1H3A4_XENTR LOC100145586 protein (Fragment) OS=Xenopu... 111 4e-23 tr|Q84K05|Q84K05_ARATH Putative uncharacterized protein At1g5477... 111 4e-23 tr|A4S974|A4S974_OSTLU Predicted protein (Fragment) OS=Ostreococ... 110 7e-23 tr|B6NCB7|B6NCB7_BRAFL Putative uncharacterized protein OS=Branc... 108 2e-22 tr|B6NCA8|B6NCA8_BRAFL Putative uncharacterized protein OS=Branc... 108 2e-22 tr|A9V1B3|A9V1B3_MONBE Predicted protein OS=Monosiga brevicollis... 108 3e-22 tr|Q59MJ8|Q59MJ8_CANAL Putative uncharacterized protein OS=Candi... 107 7e-22 tr|B7P9U1|B7P9U1_IXOSC Acidic 82 kD protein OS=Ixodes scapularis... 106 1e-21 tr|B8MTR6|B8MTR6_9EURO Nucleolus protein required for cell viabi... 106 1e-21 tr|A3GEU6|A3GEU6_PICST Predicted protein (Fragment) OS=Pichia st... 106 1e-21 tr|Q00TD3|Q00TD3_OSTTA OSJNBa0072H09.39 gene product (ISS) OS=Os... 105 2e-21 tr|B0WIT5|B0WIT5_CULQU Putative uncharacterized protein OS=Culex... 105 2e-21 tr|Q6BVN4|Q6BVN4_DEBHA DEHA2C01254p OS=Debaryomyces hansenii GN=... 104 4e-21
>tr|A9SWQ7|A9SWQ7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_18400 PE=4 SV=1 Length = 141
Score = 162 bits (410), Expect = 1e-38 Identities = 75/103 (72%), Positives = 91/103 (88%) Frame = +3
Query: 12 KDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYKAEDSKGLPKYFQVGTVIGGP 191 K+T G KW+N+ APTITPELKK+LQ++KLRGV+DPKRHYKA D+KG+PK+FQVG V+ G Sbjct: 24 KETAGAKWFNMPAPTITPELKKDLQLLKLRGVVDPKRHYKANDTKGVPKFFQVGRVVEGT 83
Query: 192 ADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQDQKQ 320 A+FYSGRLTKKE+K + A+ELLS+T L YRKRKYLEIQDQKQ Sbjct: 84 AEFYSGRLTKKERKQTFADELLSSTQLKAYRKRKYLEIQDQKQ 126
>tr|A9NVE7|A9NVE7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 347
Score = 147 bits (372), Expect = 4e-34 Identities = 68/102 (66%), Positives = 89/102 (87%) Frame = +3
Query: 3 QQKKDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYKAEDSKGLPKYFQVGTVI 182 +Q KDT+G KW+++ A TITPELKK+LQ++KLR V+DPKRHYK +D+KGLPKYFQVGTVI Sbjct: 224 KQVKDTLGAKWFDMPAQTITPELKKDLQLLKLRNVVDPKRHYKTDDAKGLPKYFQVGTVI 283
Query: 183 GGPADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQ 308 A+FYSGRLTKKE+K ++A+ELLS+++ YRKRK+LEI+ Sbjct: 284 EPAAEFYSGRLTKKERKPTIADELLSDSAFQQYRKRKHLEIE 325
>tr|A7NVY9|A7NVY9_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019717001 PE=4 SV=1 Length = 198
Score = 140 bits (354), Expect = 5e-32 Identities = 68/108 (62%), Positives = 86/108 (79%), Gaps = 2/108 (1%) Frame = +3
Query: 3 QQKKDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYKAEDSKG--LPKYFQVGT 176 +Q KDT G KW+++ APTITPELKK+LQ++KLR +DPKRHYK DSK LPKYFQ Sbjct: 68 KQVKDTTGTKWFDMPAPTITPELKKDLQLLKLRSAIDPKRHYKKSDSKSKTLPKYFQASL 127
Query: 177 VIGGPADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQDQKQ 320 VI +DF+SGRLTKKE+K SLA+ELLSN+S ++YRKRK EI++Q + Sbjct: 128 VIESASDFFSGRLTKKERKASLADELLSNSSFADYRKRKVREIEEQNR 175
>tr|B7FIY2|B7FIY2_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 200
Score = 136 bits (343), Expect = 9e-31 Identities = 63/108 (58%), Positives = 85/108 (78%), Gaps = 2/108 (1%) Frame = +3
Query: 3 QQKKDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYK--AEDSKGLPKYFQVGT 176 QQ KDT G +W+++ APTITPELKK+L++++LR DPKRHYK SK LPKYFQVGT Sbjct: 69 QQVKDTAGKQWFDMPAPTITPELKKDLKLLQLRDAFDPKRHYKKSGSKSKALPKYFQVGT 128
Query: 177 VIGGPADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQDQKQ 320 ++G P D+YSGRLT +E+K S+A+ELLS+ + S YRKRK EI++ ++ Sbjct: 129 MVGSPLDYYSGRLTNRERKESIADELLSDQNFSAYRKRKVREIEEHRR 176
>tr|A7SNR9|A7SNR9_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g125169 PE=4 SV=1 Length = 124
Score = 136 bits (342), Expect = 1e-30 Identities = 61/123 (49%), Positives = 86/123 (69%) Frame = +3
Query: 12 KDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYKAEDSKGLPKYFQVGTVIGGP 191 + + G KW++L A T+TPELK+EL+++K+R +LDPKRHYK DSK LPKYFQ+GTV+ G Sbjct: 1 EQSAGPKWFDLPATTVTPELKQELKVLKMRHILDPKRHYKKNDSKELPKYFQMGTVVEGA 60
Query: 192 ADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQDQKQAXXXXXXXXXXXXRTPA 371 ADFYS R+ K+ +KN++ ELL++ Y K+K+LEIQ K++ R PA Sbjct: 61 ADFYSSRIPKRSRKNNIVQELLADAQFRRYNKKKFLEIQAAKESGRKGFYKKKTNRRKPA 120
Query: 372 WAK 380 WA+ Sbjct: 121 WAR 123
>tr|A9PHG8|A9PHG8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 198
Score = 130 bits (328), Expect = 5e-29 Identities = 62/107 (57%), Positives = 83/107 (77%), Gaps = 2/107 (1%) Frame = +3
Query: 6 QKKDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYKAED--SKGLPKYFQVGTV 179 Q+KDT+G W+++ APTIT ELK++LQ++KLR +DPKRHYK D SK LPKYFQVGTV Sbjct: 69 QRKDTLGKDWFDMPAPTITQELKRDLQLLKLRSAIDPKRHYKRGDPKSKDLPKYFQVGTV 128
Query: 180 IGGPADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQDQKQ 320 + DFYSGRLTKKE+K ++A+ELL + + YRKRK EI+++ + Sbjct: 129 VESATDFYSGRLTKKERKATIADELLYDQTFRAYRKRKVREIEEKNR 175
>tr|Q6YWQ2|Q6YWQ2_ORYSJ Os02g0730500 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0072H09.39 PE=2 SV=1 Length = 195
Score = 126 bits (317), Expect = 9e-28 Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 1/103 (0%) Frame = +3
Query: 12 KDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYK-AEDSKGLPKYFQVGTVIGG 188 KDT G W+++ APTITPELKK+L+I++LR V+DPKRH+K A SK LPKYFQVGTVI Sbjct: 69 KDTSGKGWFDMPAPTITPELKKDLEILQLRHVMDPKRHFKRAGKSKALPKYFQVGTVIEP 128
Query: 189 PADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQDQK 317 ++F+S RLTK+E+K +L +ELLS+ L NYR RK EIQ+ + Sbjct: 129 ASEFFSSRLTKRERKTTLVDELLSDQHLKNYRMRKVREIQESR 171
>tr|A2X988|A2X988_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08805 PE=4 SV=1 Length = 195
Score = 126 bits (317), Expect = 9e-28 Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 1/103 (0%) Frame = +3
Query: 12 KDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYK-AEDSKGLPKYFQVGTVIGG 188 KDT G W+++ APTITPELKK+L+I++LR V+DPKRH+K A SK LPKYFQVGTVI Sbjct: 69 KDTSGKGWFDMPAPTITPELKKDLEILQLRHVMDPKRHFKRAGKSKALPKYFQVGTVIEP 128
Query: 189 PADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQDQK 317 ++F+S RLTK+E+K +L +ELLS+ L NYR RK EIQ+ + Sbjct: 129 ASEFFSSRLTKRERKTTLVDELLSDQHLKNYRMRKVREIQENR 171
>tr|B6TJ58|B6TJ58_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 197
Score = 122 bits (306), Expect = 2e-26 Identities = 60/101 (59%), Positives = 79/101 (78%), Gaps = 1/101 (0%) Frame = +3
Query: 12 KDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYK-AEDSKGLPKYFQVGTVIGG 188 KDT G W+++ APTITPELKK+L+I++LR V+DPKRH+K A SK LPKYFQVGTV+ Sbjct: 71 KDTAGKGWFDMPAPTITPELKKDLEILQLRHVIDPKRHFKRAGKSKALPKYFQVGTVVEP 130
Query: 189 PADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQD 311 ++FYS RL +E+K +L +ELLS+ SL +YR RK EIQ+ Sbjct: 131 ASEFYSSRLKNRERKATLVDELLSDQSLKSYRMRKVREIQE 171
>tr|B6TCJ0|B6TCJ0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 197
Score = 122 bits (306), Expect = 2e-26 Identities = 60/101 (59%), Positives = 79/101 (78%), Gaps = 1/101 (0%) Frame = +3
Query: 12 KDTIGNKWYNLSAPTITPELKKELQIVKLRGVLDPKRHYK-AEDSKGLPKYFQVGTVIGG 188 KDT G W+++ APTITPELKK+L+I++LR V+DPKRH+K A SK LPKYFQVGTV+ Sbjct: 71 KDTAGKGWFDMPAPTITPELKKDLEILQLRHVIDPKRHFKRAGKSKALPKYFQVGTVVEP 130
Query: 189 PADFYSGRLTKKEQKNSLANELLSNTSLSNYRKRKYLEIQD 311 ++FYS RL +E+K +L +ELLS+ SL +YR RK EIQ+ Sbjct: 131 ASEFYSSRLKNRERKATLVDELLSDQSLKSYRMRKVREIQE 171
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