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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959047
Clone id TST39A01NGRL0003_K01
Library
Length 692
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_K01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CAAAATGGTGAGGCAGCATTGTCTGAGTGCAGTGGTGGTGCTGGCGTTTCTGGTACCGCT
CGTAGCAGCGCGTGCAGTAGGCCGCCTCTGCGACACCTCCTCCTTCTTTCCAGACCCCAA
CAATGATCGCACTGTGACGTTCCTTGGCGCTAATGCAGGCTCCGCAGGTTTCAAGCTCTT
CTCTTTTGCCAGCAATGGCTTCCTCGGGGCTCCTGCCAATCTTGTCGAGGTAAGACTCCT
TAACCTGCACAGGAAAATGCTCTTCAACCCCACCCTTTCACACTCCCTGGATCTGCGCAT
CAAGCCAGATAAACCCTTTGTTGATGCTCCTGCCCGAAATCAAGTGGTCCAGACATGGAG
CTTCTCCACCAGCAACCCCCAGCATCCCATCATATGGATCAATATCCGCTCTCGCCGTGC
CCTTTGGCGCCCTGATCTTGCGGTTCCTCATGTTGAGCAGAAGCCCCTGAGTTTGGATTA
CGGTACCAATCTGTCGGTATTTGTGATTTCAGTTGTCTTGGGTTTTGTTTGCTTCTGGGC
TGCGGCAGCGTTAATACGAGATGTTCTGCGGAACTTTTTCATCCGCTCCCGTGAAGATCA
CGATATTGGCTTGCTCTATGGATATCAGGAATTGCCTTCTTCAGAAGCATCTGAGAAGGA
GGTTGCACAGAAGGAGTCTGCCAAGGTAAGTG
■■Homology search results ■■ -
sp_hit_id P16467
Definition sp|P16467|PDC5_YEAST Pyruvate decarboxylase isozyme 2 OS=Saccharomyces cerevisiae
Align length 65
Score (bit) 33.5
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959047|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_K01, 5'
         (692 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P16467|PDC5_YEAST Pyruvate decarboxylase isozyme 2 OS=Sacchar...    33   1.1  
sp|P34734|PDC_HANUV Pyruvate decarboxylase OS=Hanseniaspora uvar...    33   1.9  
sp|P06169|PDC1_YEAST Pyruvate decarboxylase isozyme 1 OS=Sacchar...    32   2.5  
sp|P0C1D7|CSP1_CORML Protein PS1 OS=Corynebacterium melassecola ...    32   2.5  
sp|P0C1D6|CSP1_CORGL Protein PS1 OS=Corynebacterium glutamicum G...    32   2.5  
sp|Q810F1|CTL2_CAVPO Choline transporter-like protein 2 OS=Cavia...    32   3.2  
sp|A6L1V8|LEUC_BACV8 3-isopropylmalate dehydratase large subunit...    31   5.5  
sp|Q24143|HR96_DROME Nuclear hormone receptor HR96 OS=Drosophila...    31   5.5  
sp|Q9UV64|MOCOS_EMENI Molybdenum cofactor sulfurase OS=Emericell...    30   9.4  
sp|Q8MII8|LRC25_BOVIN Leucine-rich repeat-containing protein 25 ...    30   9.4  
sp|Q9ET78|JPH2_MOUSE Junctophilin-2 OS=Mus musculus GN=Jph2 PE=1...    30   9.4  

>sp|P16467|PDC5_YEAST Pyruvate decarboxylase isozyme 2
           OS=Saccharomyces cerevisiae GN=PDC5 PE=1 SV=4
          Length = 563

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 24/65 (36%), Positives = 37/65 (56%)
 Frame = +2

Query: 200 FLGAPANLVEVRLLNLHRKMLFNPTLSHSLDLRIKPDKPFVDAPARNQVVQTWSFSTSNP 379
           +LG PANLV+   LN+  K+L  P     +DL +KP+    DA A  +VV+T      + 
Sbjct: 164 YLGLPANLVD---LNVPAKLLETP-----IDLSLKPN----DAEAEAEVVRTVVELIKDA 211

Query: 380 QHPII 394
           ++P+I
Sbjct: 212 KNPVI 216


>sp|P34734|PDC_HANUV Pyruvate decarboxylase OS=Hanseniaspora uvarum
           GN=PDC PE=3 SV=1
          Length = 564

 Score = 32.7 bits (73), Expect = 1.9
 Identities = 23/65 (35%), Positives = 37/65 (56%)
 Frame = +2

Query: 200 FLGAPANLVEVRLLNLHRKMLFNPTLSHSLDLRIKPDKPFVDAPARNQVVQTWSFSTSNP 379
           +LG PANLV+   LN+  K+L        +DL +K +    DA A N+VV+T     ++ 
Sbjct: 164 YLGLPANLVD---LNVPAKLL-----ETKIDLALKAN----DAEAENEVVETILALVADA 211

Query: 380 QHPII 394
           ++P+I
Sbjct: 212 KNPVI 216


>sp|P06169|PDC1_YEAST Pyruvate decarboxylase isozyme 1
           OS=Saccharomyces cerevisiae GN=PDC1 PE=1 SV=7
          Length = 563

 Score = 32.3 bits (72), Expect = 2.5
 Identities = 21/65 (32%), Positives = 36/65 (55%)
 Frame = +2

Query: 200 FLGAPANLVEVRLLNLHRKMLFNPTLSHSLDLRIKPDKPFVDAPARNQVVQTWSFSTSNP 379
           +LG PANLV+   LN+  K+L  P     +D+ +KP+    DA +  +V+ T      + 
Sbjct: 164 YLGLPANLVD---LNVPAKLLQTP-----IDMSLKPN----DAESEKEVIDTILALVKDA 211

Query: 380 QHPII 394
           ++P+I
Sbjct: 212 KNPVI 216


>sp|P0C1D7|CSP1_CORML Protein PS1 OS=Corynebacterium melassecola
           GN=csp1 PE=4 SV=1
          Length = 657

 Score = 32.3 bits (72), Expect = 2.5
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = -1

Query: 575 SSAEHLVLTLPQPRSKQNPRQLKSQIPTDWYRNPN 471
           ++++H++LT+      + P +++  +P DWY +PN
Sbjct: 101 ATSKHVILTIQSAAMPERPIKVQLLLPRDWYSSPN 135


>sp|P0C1D6|CSP1_CORGL Protein PS1 OS=Corynebacterium glutamicum
           GN=csp1 PE=3 SV=1
          Length = 657

 Score = 32.3 bits (72), Expect = 2.5
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = -1

Query: 575 SSAEHLVLTLPQPRSKQNPRQLKSQIPTDWYRNPN 471
           ++++H++LT+      + P +++  +P DWY +PN
Sbjct: 101 ATSKHVILTIQSAAMPERPIKVQLLLPRDWYSSPN 135


>sp|Q810F1|CTL2_CAVPO Choline transporter-like protein 2 OS=Cavia
           porcellus GN=SLC44A2 PE=1 SV=1
          Length = 705

 Score = 32.0 bits (71), Expect = 3.2
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
 Frame = -1

Query: 680 QTPSVQPPSQMLLKKAIPDIH---------RASQYRDLHGSG*KSSAEHLVLTLPQPRSK 528
           Q P+V  PS+ L ++  PDIH          A+ Y D HGS  + +   LV    Q    
Sbjct: 156 QCPAVLIPSKPLAQRCFPDIHAHKGVIMVGNATTYEDGHGS--RKNITELVEGAKQANGI 213

Query: 527 QNPRQLKSQIPTD----WY 483
              RQL  +I  D    WY
Sbjct: 214 LEARQLAMRIFEDYTVSWY 232


>sp|A6L1V8|LEUC_BACV8 3-isopropylmalate dehydratase large subunit
           OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 /
           NCTC 11154) GN=leuC PE=3 SV=1
          Length = 460

 Score = 31.2 bits (69), Expect = 5.5
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -2

Query: 271 GVEEHFPVQVKESY----LDKIGRSPEEAIAGKREELETCGACISAK 143
           G+ EH PV  K +     LD +G  P E++ GK+ +    GAC + +
Sbjct: 299 GITEHIPVDDKSASFKKSLDYMGFQPGESLLGKKIDYVFLGACTNGR 345


>sp|Q24143|HR96_DROME Nuclear hormone receptor HR96 OS=Drosophila
           melanogaster GN=Hr96 PE=1 SV=1
          Length = 723

 Score = 31.2 bits (69), Expect = 5.5
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = -3

Query: 210 APRKPLLAKEKSLKPAEPALAPRNVTVRSLLGS 112
           A RKPLL KE ++KPA PA    +  ++S+LG+
Sbjct: 315 ADRKPLLDKEPAVKPAAPA-ERADTVIQSMLGN 346


>sp|Q9UV64|MOCOS_EMENI Molybdenum cofactor sulfurase OS=Emericella
           nidulans GN=hxB PE=2 SV=2
          Length = 839

 Score = 30.4 bits (67), Expect = 9.4
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
 Frame = +2

Query: 359 SFSTSNPQHPIIWINIRSRRALWRPDLAVPHVEQ-KPLSLDYGTNLSVFVISVVLGFVCF 535
           S+  ++ Q PI+  N+R+ R +W     V  +   K + +  GT  +    ++ LG    
Sbjct: 356 SYDDASSQGPILAFNLRNSRGMWIGKSEVERLASIKNIQIRSGTLCNPGGTALSLG---- 411

Query: 536 WAAAALIRDVLRNFF--IRSREDHDI 607
           W  A    D+LR+F   +R  +DHDI
Sbjct: 412 WTGA----DMLRHFSAGMRCGDDHDI 433


>sp|Q8MII8|LRC25_BOVIN Leucine-rich repeat-containing protein 25
           OS=Bos taurus GN=LRRC25 PE=2 SV=1
          Length = 307

 Score = 30.4 bits (67), Expect = 9.4
 Identities = 23/83 (27%), Positives = 32/83 (38%)
 Frame = +1

Query: 145 WR*CRLRRFQALLFCQQWLPRGSCQSCRGKTP*PAQENALQPHPFTLPGSAHQAR*TLC* 324
           WR CR R  Q L   + W  +   +S  G+ P  + +      P   P            
Sbjct: 191 WRFCRHRMDQNL--SKTWASQDGSRSGSGRQPRYSSQGRRPKSPANTP------------ 236

Query: 325 CSCPKSSGPDMELLHQQPPASHH 393
              P+SS PD E +   PPA+ H
Sbjct: 237 ---PRSSTPDYENVFVGPPAARH 256
tr_hit_id Q5AYC2
Definition tr|Q5AYC2|Q5AYC2_EMENI Putative uncharacterized protein OS=Emericella nidulans
Align length 60
Score (bit) 38.1
E-value 0.53
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959047|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_K01, 5'
         (692 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5AYC2|Q5AYC2_EMENI Putative uncharacterized protein OS=Emeri...    38   0.53 
tr|A1DCR1|A1DCR1_NEOFI Dihydrolipoamide acetyltransferase compon...    38   0.53 
tr|Q2USG5|Q2USG5_ASPOR Dihydrolipoamide acetyltransferase OS=Asp...    37   0.91 
tr|B8MX81|B8MX81_ASPFL Pyruvate dehydrogenase complex, dihydroli...    37   0.91 
tr|Q2GMK9|Q2GMK9_CHAGB Putative uncharacterized protein OS=Chaet...    37   1.2  
tr|B7X395|B7X395_COMTE Phosphoesterase PA-phosphatase related OS...    36   2.7  
tr|B6VUD2|B6VUD2_9BACE Putative uncharacterized protein OS=Bacte...    35   5.9  
tr|B3P624|B3P624_DROER GG11545 OS=Drosophila erecta GN=GG11545 P...    35   5.9  
tr|Q2GY41|Q2GY41_CHAGB Putative uncharacterized protein OS=Chaet...    35   5.9  
tr|Q5RII0|Q5RII0_DANRE Novel protein similar to vertebrate spect...    34   7.7  
tr|A4KBN9|A4KBN9_PICV Capsid protein OS=Pigeon circovirus GN=Cap...    34   7.7  
tr|B4KKD6|B4KKD6_DROMO GI17798 OS=Drosophila mojavensis GN=GI177...    34   7.7  
tr|A2R4K6|A2R4K6_ASPNC Similarity to hypothetical protein SPBC12...    34   7.7  

>tr|Q5AYC2|Q5AYC2_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN6708.2 PE=3 SV=1
          Length = 488

 Score = 38.1 bits (87), Expect = 0.53
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
 Frame = -3

Query: 216 AGAPRKPLLAKEKSLKPAEPALA-PRNVTVRSLLGSGK-----KEEVSQRRPTARAATSG 55
           +G   +P L +E ++ PA  ALA  + V +++L G+G+     KE+V + +PTA AA +G
Sbjct: 192 SGEKLQPSLDREPAISPAAKALALEKGVPIKALKGTGRGGQITKEDVEKYKPTAAAAAAG 251


>tr|A1DCR1|A1DCR1_NEOFI Dihydrolipoamide acetyltransferase component
           of pyruvate dehydrogenase OS=Neosartorya fischeri
           (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_026950
           PE=3 SV=1
          Length = 484

 Score = 38.1 bits (87), Expect = 0.53
 Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
 Frame = -3

Query: 201 KPLLAKEKSLKPAEPALA-PRNVTVRSLLGSGK-----KEEVSQRRPTARAATSGTRNAS 40
           +P L +E ++ PA  ALA  + V +++L G+G+     KE+V + +P+  AAT+ T    
Sbjct: 194 QPSLDREPNISPAAKALALEKGVPIKALKGTGRGGQITKEDVEKYKPSVSAATAPTYEDI 253

Query: 39  TTTALRQCCLTIL 1
             T++R+   T L
Sbjct: 254 PLTSMRKTIATRL 266


>tr|Q2USG5|Q2USG5_ASPOR Dihydrolipoamide acetyltransferase
           OS=Aspergillus oryzae GN=AO090005000436 PE=3 SV=1
          Length = 459

 Score = 37.4 bits (85), Expect = 0.91
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
 Frame = -3

Query: 216 AGAPRKPLLAKEKSLKPAEPALA-PRNVTVRSLLGSGK-----KEEVSQRRPTARAATSG 55
           +G   +P L +E ++ PA  ALA  + V +++L G+G+     KE+V + +P+A AA   
Sbjct: 164 SGEKLQPSLDREPTISPAAKALALEKGVPIKALKGTGRGGQITKEDVEKYKPSASAAAGP 223

Query: 54  TRNASTTTALRQ 19
           T      T++R+
Sbjct: 224 TYEDIPLTSMRK 235


>tr|B8MX81|B8MX81_ASPFL Pyruvate dehydrogenase complex,
           dihydrolipoamide acetyltransferase OS=Aspergillus flavus
           NRRL3357 GN=AFLA_076680 PE=4 SV=1
          Length = 485

 Score = 37.4 bits (85), Expect = 0.91
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
 Frame = -3

Query: 216 AGAPRKPLLAKEKSLKPAEPALA-PRNVTVRSLLGSGK-----KEEVSQRRPTARAATSG 55
           +G   +P L +E ++ PA  ALA  + V +++L G+G+     KE+V + +P+A AA   
Sbjct: 190 SGEKLQPSLDREPTISPAAKALALEKGVPIKALKGTGRGGQITKEDVEKYKPSASAAAGP 249

Query: 54  TRNASTTTALRQ 19
           T      T++R+
Sbjct: 250 TYEDIPLTSMRK 261


>tr|Q2GMK9|Q2GMK9_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_10795 PE=4 SV=1
          Length = 298

 Score = 37.0 bits (84), Expect = 1.2
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = -1

Query: 680 QTPSVQPPSQMLLKKAIPDIHRASQYRDLH-GSG*KSSAEHLVLTLP---QPRSKQNPRQ 513
           +T +  PP  +   K + D     Q  DL  G G K +A  ++LT     Q R +   RQ
Sbjct: 179 ETETWVPPLDLYFNKRLADFEIRLQRTDLDDGQGGKRTAGGIILTACRKIQQRLRPEERQ 238

Query: 512 LKSQIPTDWYRNPNSGASAQHEEPQDQGAKGHGESG 405
                     R   SG S +H+   D G++ HG+ G
Sbjct: 239 QGPAANRGTARAHGSGESREHDRALDGGSRRHGQCG 274


>tr|B7X395|B7X395_COMTE Phosphoesterase PA-phosphatase related
           OS=Comamonas testosteroni KF-1 GN=CtesDRAFT_PD5272 PE=4
           SV=1
          Length = 191

 Score = 35.8 bits (81), Expect = 2.7
 Identities = 25/81 (30%), Positives = 33/81 (40%)
 Frame = +2

Query: 317 FVDAPARNQVVQTWSFSTSNPQHPIIWINIRSRRALWRPDLAVPHVEQKPLSLDYGTNLS 496
           F DAP        + F  +N Q P+ WI      + W P L    V    L+L  G   S
Sbjct: 3   FFDAPV-------FQFLNANTQSPLWWIQASRFASAWLPGLCALPVIAAMLALGKGWRRS 55

Query: 497 VFVISVVLGFVCFWAAAALIR 559
           + +   +L   C W A  LIR
Sbjct: 56  LQL--ALLSMACAWVACRLIR 74


>tr|B6VUD2|B6VUD2_9BACE Putative uncharacterized protein
           OS=Bacteroides dorei DSM 17855 GN=BACDOR_00905 PE=4 SV=1
          Length = 319

 Score = 34.7 bits (78), Expect = 5.9
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = -2

Query: 256 FPVQVKESYLDKIGRSPEEAIA------GKREELETCGACISAKERHSAIIVGVWKEGGG 95
           FP+ V +   D I + PE  +        K +E+++CG    +   +S  ++G+WKE   
Sbjct: 96  FPMPVVDLLFDSIEKLPESVVCISPATYFKNDEIQSCGRPRHSFLTYSLFLMGLWKEQKI 155

Query: 94  VAEAAYCTRCYERY 53
            ++  Y T  ++ Y
Sbjct: 156 KSKYTYQTGVFQTY 169


>tr|B3P624|B3P624_DROER GG11545 OS=Drosophila erecta GN=GG11545 PE=4
           SV=1
          Length = 569

 Score = 34.7 bits (78), Expect = 5.9
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
 Frame = -3

Query: 213 GAPRKPLLAKEKSLKPAEPALAPRNVTVRSLLGSGKKEEV----SQRRPTARAATSGTRN 46
           G+P    LA+ KS K  +P L  RNV V    G G +  +    S   P  +AATS T  
Sbjct: 396 GSPTNQYLARVKSPKAKQPTLKVRNVRVE---GEGLEASIGVPPSTATPKPKAATSTTTP 452

Query: 45  ASTTT 31
             TTT
Sbjct: 453 KPTTT 457


>tr|Q2GY41|Q2GY41_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_07113 PE=4 SV=1
          Length = 381

 Score = 34.7 bits (78), Expect = 5.9
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = -3

Query: 213 GAPRKPLLAKEKSLKPAEPALAPRNVTVRSLLGSGKKEEVSQRRPTARAATSGTRNASTT 34
           G     LLA+ ++ K AE     +    RSL G GKK+E +Q  PT++   + TR  +T+
Sbjct: 33  GQSESELLARREASKAAEGD--EKKKKKRSLFGFGKKKEPAQPAPTSKPTPATTRTTATS 90


>tr|Q5RII0|Q5RII0_DANRE Novel protein similar to vertebrate spectrin
           repeat containing, nuclear envelope 2 (SYNE2) (Fragment)
           OS=Danio rerio GN=syne2a PE=4 SV=1
          Length = 999

 Score = 34.3 bits (77), Expect = 7.7
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = -1

Query: 629 PDIHRASQYRDLHGSG*KSSAEHLVLTLPQPRSKQNPRQLKSQIPTDWYRNPNSGASAQH 450
           PD++   + R+       S     +L+ PQ RS +        IP +W    + G S+ H
Sbjct: 524 PDVYDGERSRETQSPPSSSQPSMCLLSPPQERSGRETPVSVDSIPLEWDHTGDVGGSSSH 583

Query: 449 EEPQDQGA 426
           +E ++  A
Sbjct: 584 DEEEEDAA 591