DK959056 |
Clone id |
TST39A01NGRL0003_K12 |
Library |
TST39 |
Length |
603 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_K12. 5' end sequence. |
Accession |
DK959056 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1094Contig1 |
Sequence |
GGTGTTTAGTCGCAGATCCTGCTAATCTTCCCGGCTGCGCTCGGTTTGGTTGGCACTATC TGGCACAATGAATCATCCTCACTCTGTCATGAGCTTCGCTTCACTCACAGGATCTCCTAC AGGCCAGACGTTGCACCCCAGCCATTTTTCCTCGGTGTTCCCAGACTGTCCTAACGAGCC TTCGCTAGACTTGAATTTTGTGCAAAAGCTGTCACAGAATAGCCAAAAGGCACAGAATGA GTTTGAGCTAGGCCACAGCTTCCATCCTCACCACAATGAAAACAGTCCAAACTCTCAAAT GGAGATAATAGCAAAGGTTGTACCTGAGTCCGTTGTATTTAATGATGGCCAGGATAAGAT GGCTATTGACAGTGTGCCTGTCAAAGCGGCACCACGGTCTCGCTGCCACTGGTCTCATGG TGAAGTAATGGCCCTGTTTGATGCAAAGAAAGCAGAAGCTGATAGATTTGATGTTGAGAT GCCTGGAAAGAAAATCAAGTATTCCTCTGAACGGTGGGATGAGGTGGCTGCCTTTGTAAA AACTAGGGGTTGCACTAAACTTGCGTCTCAGTGCAAGGATAAGTGGGAAAAGATCTGGCC AGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P82986 |
Definition |
sp|P82986|OR82A_DROME Putative odorant receptor 82a OS=Drosophila melanogaster |
Align length |
96 |
Score (bit) |
32.0 |
E-value |
2.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKP7 |
Definition |
tr|B8LKP7|B8LKP7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
117 |
Score (bit) |
49.7 |
E-value |
0.0001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959056|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_K12, 5' (603 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKP7|B8LKP7_PICSI Putative uncharacterized protein OS=Picea... 50 1e-04 tr|B8LNP6|B8LNP6_PICSI Putative uncharacterized protein OS=Picea... 49 3e-04 tr|A9T0V7|A9T0V7_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.007 tr|A8IXS2|A8IXS2_BRACM DNA binding protein GT-1 OS=Brassica camp... 42 0.027 tr|Q9LP25|Q9LP25_ARATH Putative GTL1 OS=Arabidopsis thaliana GN=... 42 0.036 tr|Q9C882|Q9C882_ARATH Trihelix DNA-binding protein (GTL1) OS=Ar... 42 0.036 tr|Q8L6Y5|Q8L6Y5_ARATH DNA-binding factor, putative (At1g33240) ... 42 0.036 tr|Q7FPN7|Q7FPN7_ARATH GTL1 protein (Fragment) OS=Arabidopsis th... 42 0.036 tr|O48590|O48590_ARATH GTL1 protein OS=Arabidopsis thaliana GN=G... 42 0.036 tr|Q6YPG7|Q6YPG7_ORYSJ Os02g0104500 protein OS=Oryza sativa subs... 41 0.047 tr|Q2A9Q8|Q2A9Q8_BRAOL DNA-binding protein-related OS=Brassica o... 41 0.047 tr|A9TNA0|A9TNA0_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.047 tr|A9TMR2|A9TMR2_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.047 tr|A3A272|A3A272_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.047 tr|A2WZT7|A2WZT7_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.047 tr|Q9ZQN7|Q9ZQN7_ARATH Putative uncharacterized protein At2g3564... 40 0.080 tr|Q8W240|Q8W240_SOYBN GT-2 factor (Fragment) OS=Glycine max PE=... 40 0.080 tr|B6HH87|B6HH87_PENCH Pc20g14010 protein OS=Penicillium chrysog... 40 0.080 tr|A9STZ4|A9STZ4_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.14 tr|A9SET4|A9SET4_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.14 tr|A9RUD2|A9RUD2_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.14 tr|A7P4T1|A7P4T1_VITVI Chromosome chr4 scaffold_6, whole genome ... 40 0.14 tr|A9TTI7|A9TTI7_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.18 tr|A9TGC8|A9TGC8_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.18 tr|A7Q7K5|A7Q7K5_VITVI Chromosome undetermined scaffold_60, whol... 39 0.18 tr|Q6H6S9|Q6H6S9_ORYSJ Putative DNA-binding protein Gt-2 OS=Oryz... 39 0.23 tr|Q53PP7|Q53PP7_ORYSJ Os11g0163500 protein OS=Oryza sativa subs... 39 0.23 tr|Q53PP6|Q53PP6_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 39 0.23 tr|Q0DZ44|Q0DZ44_ORYSJ Os02g0648300 protein (Fragment) OS=Oryza ... 39 0.23 tr|B8AG14|B8AG14_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.23
>tr|B8LKP7|B8LKP7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 351
Score = 49.7 bits (117), Expect = 1e-04 Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 8/117 (6%) Frame = +2
Query: 275 NENSPNSQMEIIAKVV--------PESVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVM 430 +E PN M +A+V+ P V ++ + K + S + R W+ + + Sbjct: 30 SEQQPNHPMTTVAEVICCLPSSQDPRDVTPHEVRGKRKLSS-----EHKGRVRWTSSDTL 84
Query: 431 ALFDAKKAEADRFDVEMPGKKIKYSSERWDEVAAFVKTRGCTKLASQCKDKWEKIWP 601 L +AK E + K+ K + E+W ++A G + A+QC+D+W+ I P Sbjct: 85 VLVNAKLVEKNMHSAGGAIKRTKSAIEKWRTISAHCHDNGLDRNATQCRDRWKHILP 141
>tr|B8LNP6|B8LNP6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 332
Score = 48.5 bits (114), Expect = 3e-04 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Frame = +2
Query: 371 SVPVKAAPRSRCHWSHGEVMALFDAKKAEADRFDVEMPG---KKIKYSSERWDEVAAFVK 541 ++ K P+ R W+ E + L +AK+ E + + PG K+ K + E+W +A Sbjct: 46 TITQKKQPKGRVRWTVSETLTLINAKQVEKN---LPSPGGFMKQTKSAIEKWKCTSAQCH 102
Query: 542 TRGCTKLASQCKDKWEKIWP 601 + G + A+QC+D+W+ I P Sbjct: 103 SNGLNRTATQCRDRWDHIQP 122
>tr|A9T0V7|A9T0V7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86604 PE=4 SV=1 Length = 311
Score = 43.9 bits (102), Expect = 0.007 Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Frame = +2
Query: 410 WSHGEVMALFDAKKAEADRF-DVEMPGKKIKYSSERWDEVAAFVKTRGCTKLASQCKDKW 586 W+ E++ L +AKK E +R + + G K+ ++E+W VA ++T+ + SQC+DKW Sbjct: 57 WTVTEMLTLIEAKKEERERCQEYKSQGVKLP-AAEKWRIVAMHMETKEMERSGSQCQDKW 115
Query: 587 EKI 595 E + Sbjct: 116 ENM 118
>tr|A8IXS2|A8IXS2_BRACM DNA binding protein GT-1 OS=Brassica campestris PE=2 SV=1 Length = 399
Score = 42.0 bits (97), Expect = 0.027 Identities = 24/114 (21%), Positives = 47/114 (41%) Frame = +2
Query: 254 HSFHPHHNENSPNSQMEIIAKVVPESVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVMA 433 H+ HPHHN N + + P+ ++ + + VKA + W E + Sbjct: 37 HNHHPHHNHNHHHHN-----HLQPQQILLGESSG----EDHEVKAPKKRAETWVQDETRS 87
Query: 434 LFDAKKAEADRFDVEMPGKKIKYSSERWDEVAAFVKTRGCTKLASQCKDKWEKI 595 L ++ F+ K + W+E++A ++ +G + + C DKW + Sbjct: 88 LIMFRRGMDGLFNTSKSNKHL------WEEISAKMREKGFDRSPTMCTDKWRNL 135
>tr|Q9LP25|Q9LP25_ARATH Putative GTL1 OS=Arabidopsis thaliana GN=T9L6.10 PE=4 SV=1 Length = 730
Score = 41.6 bits (96), Expect = 0.036 Identities = 24/91 (26%), Positives = 40/91 (43%) Frame = +2
Query: 323 PESVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVMALFDAKKAEADRFDVEMPGKKIKY 502 PE Q +M + S SR W E++AL + + R+ +P + Sbjct: 470 PEQKQQQQPQQEMVMSSEQSSLPSSSR--WPKAEILALINLRSGMEPRYQDNVPKGLL-- 525
Query: 503 SSERWDEVAAFVKTRGCTKLASQCKDKWEKI 595 W+E++ +K G + A +CK+KWE I Sbjct: 526 ----WEEISTSMKRMGYNRNAKRCKEKWENI 552
>tr|Q9C882|Q9C882_ARATH Trihelix DNA-binding protein (GTL1) OS=Arabidopsis thaliana GN=T16O9.10 PE=4 SV=1 Length = 594
Score = 41.6 bits (96), Expect = 0.036 Identities = 24/91 (26%), Positives = 40/91 (43%) Frame = +2
Query: 323 PESVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVMALFDAKKAEADRFDVEMPGKKIKY 502 PE Q +M + S SR W E++AL + + R+ +P + Sbjct: 409 PEQKQQQQPQQEMVMSSEQSSLPSSSR--WPKAEILALINLRSGMEPRYQDNVPKGLL-- 464
Query: 503 SSERWDEVAAFVKTRGCTKLASQCKDKWEKI 595 W+E++ +K G + A +CK+KWE I Sbjct: 465 ----WEEISTSMKRMGYNRNAKRCKEKWENI 491
>tr|Q8L6Y5|Q8L6Y5_ARATH DNA-binding factor, putative (At1g33240) OS=Arabidopsis thaliana GN=At1g33240 PE=2 SV=1 Length = 338
Score = 41.6 bits (96), Expect = 0.036 Identities = 24/91 (26%), Positives = 40/91 (43%) Frame = +2
Query: 323 PESVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVMALFDAKKAEADRFDVEMPGKKIKY 502 PE Q +M + S SR W E++AL + + R+ +P + Sbjct: 160 PEQKQQQQPQQEMVMSSEQSSLPSSSR--WPKAEILALINLRSGMEPRYQDNVPKGLL-- 215
Query: 503 SSERWDEVAAFVKTRGCTKLASQCKDKWEKI 595 W+E++ +K G + A +CK+KWE I Sbjct: 216 ----WEEISTSMKRMGYNRNAKRCKEKWENI 242
>tr|Q7FPN7|Q7FPN7_ARATH GTL1 protein (Fragment) OS=Arabidopsis thaliana GN=GTL1 PE=2 SV=1 Length = 433
Score = 41.6 bits (96), Expect = 0.036 Identities = 24/91 (26%), Positives = 40/91 (43%) Frame = +2
Query: 323 PESVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVMALFDAKKAEADRFDVEMPGKKIKY 502 PE Q +M + S SR W E++AL + + R+ +P + Sbjct: 344 PEQKQQQQPQQEMVMSSEQSSLPSSSR--WPKAEILALINLRSGMEPRYQDNVPKGLL-- 399
Query: 503 SSERWDEVAAFVKTRGCTKLASQCKDKWEKI 595 W+E++ +K G + A +CK+KWE I Sbjct: 400 ----WEEISTSMKRMGYNRNAKRCKEKWENI 426
>tr|O48590|O48590_ARATH GTL1 protein OS=Arabidopsis thaliana GN=GTL1 PE=4 SV=1 Length = 594
Score = 41.6 bits (96), Expect = 0.036 Identities = 24/91 (26%), Positives = 40/91 (43%) Frame = +2
Query: 323 PESVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVMALFDAKKAEADRFDVEMPGKKIKY 502 PE Q +M + S SR W E++AL + + R+ +P + Sbjct: 409 PEQKQQQQPQQEMVMSSEQSSLPSSSR--WPKAEILALINLRSGMEPRYQDNVPKGLL-- 464
Query: 503 SSERWDEVAAFVKTRGCTKLASQCKDKWEKI 595 W+E++ +K G + A +CK+KWE I Sbjct: 465 ----WEEISTSMKRMGYNRNAKRCKEKWENI 491
>tr|Q6YPG7|Q6YPG7_ORYSJ Os02g0104500 protein OS=Oryza sativa subsp. japonica GN=OJA1212_C06.8 PE=4 SV=1 Length = 370
Score = 41.2 bits (95), Expect = 0.047 Identities = 29/92 (31%), Positives = 41/92 (44%) Frame = +2
Query: 320 VPESVVFNDGQDKMAIDSVPVKAAPRSRCHWSHGEVMALFDAKKAEADRFDVEMPGKKIK 499 V + VV DG+ + + S W EV AL + DRF + PG K Sbjct: 165 VGKEVVAYDGEGSLQLSS----------SRWPKHEVEALIRVRTGLEDRF--QEPGLK-- 210
Query: 500 YSSERWDEVAAFVKTRGCTKLASQCKDKWEKI 595 W+EV+A + G + A +CK+KWE I Sbjct: 211 --GPLWEEVSARMAAAGYRRNAKRCKEKWENI 240
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