DK959063 |
Clone id |
TST39A01NGRL0003_K19 |
Library |
TST39 |
Length |
669 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_K19. 5' end sequence. |
Accession |
DK959063 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL693Contig1 |
Sequence |
CTCTCTCTCGCGCGCGCGCGCGCGCGCGCTCGACGCACAACCAGCTGCACACATGCACGC ACTCAGTCGCGCACACAGGCGTGCAATTGTCACATCTGCTCATGTGTCTCTTATGGTCTG ATGGCTGGCCACACTGAGTGGCAGCATCGTTGCTCTTGTTTCGGCTATGGAGGAGGGGAG TTCTAGCAGCCAGGGTAGCCCAGTAGGTGGCTCTGCTGAACAAGATGACACAGATAGAAG TGGAGCCAGAGAACTTCTCCAGAATGTTCCCGCTCGCGAGCCAGAAATGTTCCTACCTAT CGCTAACATCAGTCGCATCATGAGGCGGATTCTTCCTGCAAATGCAAAAGTTGCTAAGGA GGCTAAAGAATGTGTACAGGAGTGTGTCACAGAATTTATCAGTTTCATCACAAGCGAAGC TAGCGATAGATGTCTTGAAGAAAAACGTAAAACCATTAATGGCGACGATGTGATTGGTGC TATGACAACCCTTGGTTTTGACAATTATGTTGAGCTTTTGAAGGTGTATCTCCAACGGTA CAGAGAGTTAGAGGGTGACTTTAGAAGTGCACGTGGGACTAGAAGTCTGCTAGAACCTCA TAAGGATGATGAAGAAAATTCTGAAAGTATGCCGAAATTGCAGGTGTAATCGCGGACCAT TACTCTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23310 |
Definition |
sp|O23310|NFYB3_ARATH Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana |
Align length |
118 |
Score (bit) |
154.0 |
E-value |
5.0e-37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NL76 |
Definition |
tr|A9NL76|A9NL76_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
131 |
Score (bit) |
153.0 |
E-value |
8.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959063|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_K19, 5' (669 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NL76|A9NL76_PICSI Putative uncharacterized protein OS=Picea... 153 8e-36 tr|A7Q300|A7Q300_VITVI Chromosome chr12 scaffold_47, whole genom... 152 2e-35 tr|A5B7N5|A5B7N5_VITVI Putative uncharacterized protein OS=Vitis... 152 2e-35 tr|Q2A9Q6|Q2A9Q6_BRAOL Transcription factor Hap3b, putative OS=B... 151 4e-35 tr|A9XXD6|A9XXD6_9TRAC CCAAT-box binding factor HAP3-like protei... 151 4e-35 tr|B7EQX8|B7EQX8_ORYSJ cDNA clone:J023121O11, full insert sequen... 149 1e-34 tr|B4FVF9|B4FVF9_MAIZE Putative uncharacterized protein OS=Zea m... 149 1e-34 tr|A9XXD7|A9XXD7_9TRAC CCAAT-box binding factor HAP3-like protei... 149 1e-34 tr|A9P2F4|A9P2F4_PICSI Putative uncharacterized protein OS=Picea... 149 2e-34 tr|Q69J40|Q69J40_ORYSJ Os07g0606600 protein OS=Oryza sativa subs... 149 2e-34 tr|B8B8B7|B8B8B7_ORYSI Putative uncharacterized protein OS=Oryza... 149 2e-34 tr|B6SUG8|B6SUG8_MAIZE Nuclear transcription factor Y subunit B-... 149 2e-34 tr|A9TS17|A9TS17_PHYPA Predicted protein OS=Physcomitrella paten... 149 2e-34 tr|A9XXD5|A9XXD5_9TRAC CCAAT-box binding factor HAP3-like protei... 148 3e-34 tr|B0XLC7|B0XLC7_CULQU Nuclear transcription factor Y subunit be... 147 6e-34 tr|B0WXC5|B0WXC5_CULQU Ccaat-binding transcription factor subuni... 147 6e-34 tr|B6UBN3|B6UBN3_MAIZE Nuclear transcription factor Y subunit B-... 147 8e-34 tr|Q6YNK0|Q6YNK0_ORYSI HAP3-like transcriptional-activator OS=Or... 146 1e-33 tr|Q05KQ3|Q05KQ3_ORYSI Heading date 5 OS=Oryza sativa subsp. ind... 146 1e-33 tr|A2YRQ7|A2YRQ7_ORYSI Putative uncharacterized protein OS=Oryza... 146 1e-33 tr|B0XLH5|B0XLH5_CULQU Nuclear transcription factor Y subunit be... 146 1e-33 tr|B7FGV1|B7FGV1_MEDTR Putative uncharacterized protein OS=Medic... 146 1e-33 tr|Q1W9Y2|Q1W9Y2_SALMI Transcription factory NF-YB OS=Salvia mil... 145 2e-33 tr|A9U3B5|A9U3B5_PHYPA Predicted protein (Fragment) OS=Physcomit... 145 2e-33 tr|A9SIX4|A9SIX4_PHYPA Predicted protein (Fragment) OS=Physcomit... 145 2e-33 tr|A9RS41|A9RS41_PHYPA Predicted protein (Fragment) OS=Physcomit... 145 2e-33 tr|A7Q978|A7Q978_VITVI Chromosome chr19 scaffold_66, whole genom... 145 2e-33 tr|A7PIB1|A7PIB1_VITVI Chromosome chr13 scaffold_17, whole genom... 145 2e-33 tr|A5C8J3|A5C8J3_VITVI Putative uncharacterized protein OS=Vitis... 145 2e-33 tr|A9XXD8|A9XXD8_9TRAC CCAAT-box binding factor HAP3-like protei... 145 2e-33
>tr|A9NL76|A9NL76_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 220
Score = 153 bits (387), Expect = 8e-36 Identities = 80/131 (61%), Positives = 96/131 (73%), Gaps = 1/131 (0%) Frame = +2
Query: 233 DRSGARELL-QNVPAREPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFISFI 409 D SGA Q+ +E + FLPIAN+SRIM++ LPANAK++K+AKE VQECV+EFISFI Sbjct: 18 DESGAHTYSNQDGSVKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFI 77
Query: 410 TSEASDRCLEEKRKTINGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGDFRSARGTRSL 589 T EASD+C EKRKTINGDD++ AM TLGF+NYVE LKVYLQ+YRELEG+ S Sbjct: 78 TGEASDKCQREKRKTINGDDLLWAMGTLGFENYVEPLKVYLQKYRELEGEKTSMAKQSGD 137
Query: 590 LEPHKDDEENS 622 P KD S Sbjct: 138 QSPSKDASSGS 148
>tr|A7Q300|A7Q300_VITVI Chromosome chr12 scaffold_47, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029096001 PE=4 SV=1 Length = 215
Score = 152 bits (384), Expect = 2e-35 Identities = 76/119 (63%), Positives = 93/119 (78%), Gaps = 2/119 (1%) Frame = +2
Query: 227 DTDRSGARELLQN--VPAREPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFI 400 D D G N + ARE + FLPIAN+SRIM++ LPANAK++K+AKE VQECV+EFI Sbjct: 5 DNDSGGHNNSNANSELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFI 64
Query: 401 SFITSEASDRCLEEKRKTINGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGDFRSARG 577 SFIT EASD+C EKRKTINGDD++ AMTTLGF+ YVE LK+YLQ+YRE+EG+ S G Sbjct: 65 SFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKSSLGG 123
>tr|A5B7N5|A5B7N5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012918 PE=4 SV=1 Length = 459
Score = 152 bits (384), Expect = 2e-35 Identities = 76/119 (63%), Positives = 93/119 (78%), Gaps = 2/119 (1%) Frame = +2
Query: 227 DTDRSGARELLQN--VPAREPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFI 400 D D G N + ARE + FLPIAN+SRIM++ LPANAK++K+AKE VQECV+EFI Sbjct: 253 DNDSGGHNNSNANSELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFI 312
Query: 401 SFITSEASDRCLEEKRKTINGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGDFRSARG 577 SFIT EASD+C EKRKTINGDD++ AMTTLGF+ YVE LK+YLQ+YRE+EG+ S G Sbjct: 313 SFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKSSLGG 371
>tr|Q2A9Q6|Q2A9Q6_BRAOL Transcription factor Hap3b, putative OS=Brassica oleracea GN=26.t00012 PE=4 SV=1 Length = 185
Score = 151 bits (381), Expect = 4e-35 Identities = 71/111 (63%), Positives = 92/111 (82%) Frame = +2
Query: 227 DTDRSGARELLQNVPAREPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFISF 406 D D G + + RE + FLPIAN+SRIM++ LPANAK++K+AKE +QECV+EFISF Sbjct: 5 DKDSGGGQNGQSPLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISF 64
Query: 407 ITSEASDRCLEEKRKTINGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGD 559 +T EASD+C +EKRKTINGDD++ AMTTLGF++YVE LKVYLQR+RE+EG+ Sbjct: 65 VTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 115
>tr|A9XXD6|A9XXD6_9TRAC CCAAT-box binding factor HAP3-like protein (Fragment) OS=Selaginella moellendorffii GN=HAP3D2 PE=2 SV=1 Length = 153
Score = 151 bits (381), Expect = 4e-35 Identities = 76/112 (67%), Positives = 90/112 (80%) Frame = +2
Query: 224 DDTDRSGARELLQNVPAREPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFIS 403 DD G NV RE + FLPIANISRIM++ LPANAK+AK+AKE VQECV+EFIS Sbjct: 7 DDAGGHGGERDNSNV--REQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFIS 64
Query: 404 FITSEASDRCLEEKRKTINGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGD 559 FITSEASD+C EKRKTINGDD++ AM+TLGF+ Y+E LK+YLQ+YRE EGD Sbjct: 65 FITSEASDKCQREKRKTINGDDLLWAMSTLGFEEYLEPLKIYLQKYRETEGD 116
>tr|B7EQX8|B7EQX8_ORYSJ cDNA clone:J023121O11, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 185
Score = 149 bits (377), Expect = 1e-34 Identities = 70/95 (73%), Positives = 85/95 (89%) Frame = +2
Query: 275 REPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFISFITSEASDRCLEEKRKT 454 RE + FLPIANISRIM++ +PAN K+AK+AKE VQECV+EFISFITSEASD+C EKRKT Sbjct: 37 REQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 96
Query: 455 INGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGD 559 INGDD++ AM TLGF++Y+E LKVYLQ+YRE+EGD Sbjct: 97 INGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD 131
>tr|B4FVF9|B4FVF9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 180
Score = 149 bits (377), Expect = 1e-34 Identities = 70/95 (73%), Positives = 85/95 (89%) Frame = +2
Query: 275 REPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFISFITSEASDRCLEEKRKT 454 RE + FLPIANISRIM++ +PAN K+AK+AKE VQECV+EFISFITSEASD+C EKRKT Sbjct: 32 REQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 91
Query: 455 INGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGD 559 INGDD++ AM TLGF++Y+E LKVYLQ+YRE+EGD Sbjct: 92 INGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD 126
>tr|A9XXD7|A9XXD7_9TRAC CCAAT-box binding factor HAP3-like protein (Fragment) OS=Selaginella moellendorffii GN=HAP3D2 PE=2 SV=1 Length = 153
Score = 149 bits (377), Expect = 1e-34 Identities = 75/112 (66%), Positives = 90/112 (80%) Frame = +2
Query: 224 DDTDRSGARELLQNVPAREPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFIS 403 DD G NV RE + FLPIANISRIM++ LPANAK+AK+A+E VQECV+EFIS Sbjct: 7 DDAGGHGGERDNSNV--REQDRFLPIANISRIMKKALPANAKIAKDAEETVQECVSEFIS 64
Query: 404 FITSEASDRCLEEKRKTINGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGD 559 FITSEASD+C EKRKTINGDD++ AM+TLGF+ Y+E LK+YLQ+YRE EGD Sbjct: 65 FITSEASDKCQREKRKTINGDDLLWAMSTLGFEEYLEPLKIYLQKYRETEGD 116
>tr|A9P2F4|A9P2F4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 161
Score = 149 bits (376), Expect = 2e-34 Identities = 79/140 (56%), Positives = 106/140 (75%), Gaps = 1/140 (0%) Frame = +2
Query: 227 DTDRSGARELLQNVPAREPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFISF 406 ++ RSG + +V RE + FLPIANISRIM++ LPAN K+AK+AKE VQECV+EFISF Sbjct: 11 ESPRSGEQSPQSSV--REQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISF 68
Query: 407 ITSEASDRCLEEKRKTINGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGDFRSARGTRS 586 ITSEASD+C EKRKTINGDD++ AM+TLGF++Y+E LKVYL YRE EGD + + ++S Sbjct: 69 ITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYIEPLKVYLLMYREAEGDNKGS--SKS 126
Query: 587 LLEPHKDDEEN-SESMPKLQ 643 ++ + E N + +P +Q Sbjct: 127 GVDQYGKKESNVHQGIPNMQ 146
>tr|Q69J40|Q69J40_ORYSJ Os07g0606600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0072I06.11 PE=2 SV=1 Length = 224
Score = 149 bits (375), Expect = 2e-34 Identities = 70/111 (63%), Positives = 90/111 (81%) Frame = +2
Query: 227 DTDRSGARELLQNVPAREPEMFLPIANISRIMRRILPANAKVAKEAKECVQECVTEFISF 406 D + G + ARE + FLPIAN+SRIM+R LPANAK++K+AKE VQECV+EFISF Sbjct: 5 DNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISF 64
Query: 407 ITSEASDRCLEEKRKTINGDDVIGAMTTLGFDNYVELLKVYLQRYRELEGD 559 IT EASD+C EKRKTINGDD++ AMTTLGF++Y++ LK+YL ++RELEG+ Sbjct: 65 ITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGE 115
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