DK959077 |
Clone id |
TST39A01NGRL0003_L09 |
Library |
TST39 |
Length |
628 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_L09. 5' end sequence. |
Accession |
DK959077 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1043Contig1 |
Sequence |
CTGACAGTGAACTTGAAGATAATGGTGCAGCAGATGATTCAGACGGACATGAAAGTGGTG AGGATAATGAAGGAAGCGGCGAGGGTTTAGGCGAAGGGTTTTATGAGGTAGAGAGCGTGT GCAAGAAACGTGTTCGTAAGGGTCAGGTGCAGTACCTTATAAAGTGGCGAGGATGGCCAG AGTCGGCAAATACTTGGGAACCCTTCGACAATGTTAAGGCTTGTGCAGACATCATAGAAG AATTTGAGCAAAGTTCTGCAGCCAAGCCAGGTAAAAGAGGGCGCAGCAAAAAGAAAAGTG GAACAAATAGTTTGCCTCTGAAGAAGAAATGGAACTCACCAGAAAATGAGGAGGAGGGAA GTGCTGTGAACCTAGAGGAAGCCATTGTTGCAGCTAGTAATGACAATAACAAGCCTATTT CTGGGAAAATGGAGGTTGCTACTGTGCAGAAAGAGAGTGACGACAATGACTCTCAGCAAC ATGTTGTGCCTGAAGTCAGGAAAGAGTTTACTTTACCTGATTCGACAACTGGCCTCAAAG ACTCCTTACATACTCCATTGTCATTTGAGAAACCTTCTCCTTCTGGTGGTGAAGAAACCT GCTCTTCATTGCCATGTGGCGGAGAGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q946J8 |
Definition |
sp|Q946J8|LHP1_ARATH Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana |
Align length |
52 |
Score (bit) |
87.0 |
E-value |
7.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7M6G6 |
Definition |
tr|A7M6G6|A7M6G6_MALDO Like heterochromatin protein 1 OS=Malus domestica |
Align length |
52 |
Score (bit) |
91.3 |
E-value |
4.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959077|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_L09, 5' (628 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7M6G6|A7M6G6_MALDO Like heterochromatin protein 1 OS=Malus d... 91 4e-17 tr|A7M6G2|A7M6G2_MALDO Terminal flower 2 protein OS=Malus domest... 91 4e-17 tr|A7M6G1|A7M6G1_MALDO Terminal flower 2 protein OS=Malus domest... 91 4e-17 tr|A7M6G0|A7M6G0_MALDO Terminal flower 2 protein OS=Malus domest... 91 4e-17 tr|A7M6F9|A7M6F9_MALDO Terminal flower 2 protein (Like heterochr... 91 4e-17 tr|Q8LK11|Q8LK11_MAIZE Putative uncharacterized protein OS=Zea m... 87 6e-16 tr|Q058P7|Q058P7_ARATH At5g17690 OS=Arabidopsis thaliana PE=2 SV=1 87 8e-16 tr|B7F9Z6|B7F9Z6_ORYSJ cDNA, clone: J100021I21, full insert sequ... 86 2e-15 tr|O65791|O65791_DAUCA Polycomb-like protein OS=Daucus carota PE... 84 5e-15 tr|Q4SFD2|Q4SFD2_TETNG Chromosome 2 SCAF14604, whole genome shot... 67 9e-10 tr|Q1KKW5|Q1KKW5_FUGRU Chromobox-like 1 OS=Fugu rubripes GN=Cbx1... 67 9e-10 tr|B4KGW8|B4KGW8_DROMO GI15430 OS=Drosophila mojavensis GN=GI154... 66 1e-09 tr|Q49BM3|Q49BM3_DROSI GD22433 OS=Drosophila simulans GN=rhi PE=... 66 2e-09 tr|Q6XJ26|Q6XJ26_DROYA Similar to Drosophila melanogaster Su(Var... 65 3e-09 tr|B6UVT7|B6UVT7_DROME Heterochromatin protein 1 (Fragment) OS=D... 65 3e-09 tr|B6UVT6|B6UVT6_DROME Heterochromatin protein 1 OS=Drosophila m... 65 3e-09 tr|B6UVS3|B6UVS3_DROME Heterochromatin protein 1 (Fragment) OS=D... 65 3e-09 tr|B6UVS1|B6UVS1_DROME Heterochromatin protein 1 OS=Drosophila m... 65 3e-09 tr|B6UVR4|B6UVR4_DROME Heterochromatin protein 1 OS=Drosophila m... 65 3e-09 tr|B6UVR1|B6UVR1_DROSI Heterochromatin protein 1 OS=Drosophila s... 65 3e-09 tr|B6UVQ8|B6UVQ8_DROSI Heterochromatin protein 1 OS=Drosophila s... 65 3e-09 tr|B6UVQ6|B6UVQ6_DROYA Heterochromatin protein 1 OS=Drosophila y... 65 3e-09 tr|B4NWF2|B4NWF2_DROYA Su(Var)205 OS=Drosophila yakuba GN=Dyak\S... 65 3e-09 tr|B4HYG3|B4HYG3_DROSE GM13138 OS=Drosophila sechellia GN=GM1313... 65 3e-09 tr|A7RHT1|A7RHT1_NEMVE Predicted protein OS=Nematostella vectens... 65 3e-09 tr|A4V0F1|A4V0F1_DROME Heterochromatin protein 1 OS=Drosophila m... 65 3e-09 tr|Q7QKG5|Q7QKG5_ANOGA AGAP009444-PA OS=Anopheles gambiae GN=AGA... 63 1e-08 tr|Q94996|Q94996_TETTH Pdd1p OS=Tetrahymena thermophila GN=PDD1 ... 63 2e-08 tr|Q16HA0|Q16HA0_AEDAE Polycomb protein OS=Aedes aegypti GN=AAEL... 63 2e-08 tr|B4KNX4|B4KNX4_DROMO GI20276 OS=Drosophila mojavensis GN=GI202... 63 2e-08
>tr|A7M6G6|A7M6G6_MALDO Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=4 SV=1 Length = 453
Score = 91.3 bits (225), Expect = 4e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +3
Query: 99 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 254 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 107 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 158
>tr|A7M6G2|A7M6G2_MALDO Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1 Length = 456
Score = 91.3 bits (225), Expect = 4e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +3
Query: 99 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 254 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 106 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 157
>tr|A7M6G1|A7M6G1_MALDO Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1 Length = 456
Score = 91.3 bits (225), Expect = 4e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +3
Query: 99 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 254 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 106 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 157
>tr|A7M6G0|A7M6G0_MALDO Terminal flower 2 protein OS=Malus domestica GN=MdLHP1a PE=2 SV=1 Length = 453
Score = 91.3 bits (225), Expect = 4e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +3
Query: 99 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 254 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 107 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 158
>tr|A7M6F9|A7M6F9_MALDO Terminal flower 2 protein (Like heterochromatin protein 1) OS=Malus domestica GN=MdLHP1a PE=2 SV=1 Length = 453
Score = 91.3 bits (225), Expect = 4e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +3
Query: 99 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 254 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 107 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 158
>tr|Q8LK11|Q8LK11_MAIZE Putative uncharacterized protein OS=Zea mays GN=crd101 PE=2 SV=1 Length = 380
Score = 87.4 bits (215), Expect = 6e-16 Identities = 32/53 (60%), Positives = 48/53 (90%) Frame = +3
Query: 99 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQSS 257 ++E+E++ ++R+RKGQ+QYL+KWRGWPESANTWEP +N+KAC+DI++ F + S Sbjct: 65 YFEIEAIRRRRLRKGQLQYLVKWRGWPESANTWEPLENLKACSDIVDAFNKRS 117
>tr|Q058P7|Q058P7_ARATH At5g17690 OS=Arabidopsis thaliana PE=2 SV=1 Length = 445
Score = 87.0 bits (214), Expect = 8e-16 Identities = 35/52 (67%), Positives = 47/52 (90%) Frame = +3
Query: 99 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 254 FYE+E++ +KRVRKG+VQYLIKWRGWPE+ANTWEP +N+++ AD+I+ FE S Sbjct: 107 FYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFEGS 158
>tr|B7F9Z6|B7F9Z6_ORYSJ cDNA, clone: J100021I21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 415
Score = 85.9 bits (211), Expect = 2e-15 Identities = 32/50 (64%), Positives = 45/50 (90%) Frame = +3
Query: 99 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFE 248 +YE+E + ++R+RKG++QYL+KWRGWPESANTWEP +N+ AC+DII+ FE Sbjct: 106 YYEIEDIRRRRLRKGKLQYLVKWRGWPESANTWEPLENLSACSDIIDAFE 155
>tr|O65791|O65791_DAUCA Polycomb-like protein OS=Daucus carota PE=2 SV=1 Length = 392
Score = 84.3 bits (207), Expect = 5e-15 Identities = 32/56 (57%), Positives = 47/56 (83%) Frame = +3
Query: 99 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQSSAAK 266 F+E+E + +KRV+KG+VQYL+KWRGWPESANTWEP ++++A D+++ FEQ + K Sbjct: 54 FFEIEHIRRKRVKKGEVQYLVKWRGWPESANTWEPVEHLEAVPDVVDAFEQRQSGK 109
>tr|Q4SFD2|Q4SFD2_TETNG Chromosome 2 SCAF14604, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00019151001 PE=4 SV=1 Length = 162
Score = 67.0 bits (162), Expect = 9e-10 Identities = 41/123 (33%), Positives = 61/123 (49%) Frame = +3
Query: 102 YEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQSSAAKPXXXX 281 Y VE V +RV KG+V+YL+KW+G+ + NTWEP DN+ C D+I EF QS + Sbjct: 7 YVVEKVLNRRVVKGRVEYLLKWKGFSDEDNTWEPEDNLD-CPDLIAEFLQSQKSAQEGKR 65
Query: 282 XXXXXXXTNSLPLKKKWNSPENEEEGSAVNLEEAIVAASNDNNKPISGKMEVATVQKESD 461 KKK + PE + + E I+ A++ +G++ K SD Sbjct: 66 KAGGEVEGEESKAKKKKDDPEKLRGFARGLVPERIIGATDS-----TGELMFLMKWKNSD 120
Query: 462 DND 470 + D Sbjct: 121 EAD 123
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