| DK959095 | 
  
    | Clone id | TST39A01NGRL0003_M04 | 
  
    | Library | TST39 | 
  
    | Length | 674 | 
  
    | Definition | Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_M04. 5' end sequence. | 
  
    | Accession | DK959095 | 
  
    | Tissue type | prothallia with plantlets | 
  
    | Developmental stage | gametophytes with sporophytes | 
  
    | Contig ID | CL128Contig1 | 
  
    | Sequence | ATCCCCAGCCTTCCTGCGTGTTTGCAAGCTATGGAAGGTGTAGTGAGCGTGAGGGCGGCCACACCCACAGCCCTCTGTGTAGCTACAACGCCGTCCCCTGCGTCGTCTTCGCGCTCGTTG
 TCATACCGCCTCCCCGCCATCAGAGGATCCCTTAAGCATCAGGGATGCAACACATCTAGC
 AGCTCCTCGCTTCAGGAGAGCCTACAGCGCATGGCTACCAAGATCACTCAAAACCCTACC
 CTTCGCAATGCTGCTTTCTTTGCGATGAATGCCCTCTGGGCAGTGCCAGCCATAGCTGCA
 GAAGTCGCAGCAGAGGCAGAAGAGAAGGGAAAGATTTTCGATTTTAATCTCACCCTCCCC
 ATTATCGCGGCAGAGTTCCTGTTGCTCATGGTGACTTTGGACAACATATGGTTTAAGCCT
 GTGGCCAAGGTTATGGATGACAGAGATGAAGCCATCAGGCAGAAGCTTATGAGTGTGCGC
 GACAATTCCGACGAGATCAAGAAGCTGCAAGAGCAGGCTGAGGCGATCCTCAAGGCCGCA
 CGTGCAGAGACCACGGCGGAGCTCAACAAGATGAAGAGGGAGACGGCAGCAAAGCTTGAT
 GCCAAGCTTCAGGAATCACGCGAAAGAATAGAGAAAGAGCTTGCAGAAGCTATTGCAAAC
 CTAGAGGTGCAGAA
 | 
  
    | ■■Homology search results ■■ | - | 
  
    | Swiss-Prot  (release 56.9) | Link to BlastX Result : Swiss-Prot | 
  
    | sp_hit_id | P31853 | 
  
    | Definition | sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spinacia oleracea | 
  
    | Align length | 116 | 
  
    | Score (bit) | 132.0 | 
  
    | E-value | 2.0e-30 | 
  
    | Report |  BLASTX 2.2.19 [Nov-02-2008]
 
 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
 Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
 "Gapped BLAST and PSI-BLAST: a new generation of protein database search
 programs",  Nucleic Acids Res. 25:3389-3402.
 
 Query= DK959095|Adiantum capillus-veneris mRNA, clone:
 TST39A01NGRL0003_M04, 5'
 (674 letters)
 
 Database: uniprot_sprot.fasta
 412,525 sequences; 148,809,765 total letters
 
 Searching..................................................done
 
 
 
 Score    E
 Sequences producing significant alignments:                      (bits) Value
 
 sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spi...   132   2e-30
 sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic OS=Por...    75   2e-13
 sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic OS=Por...    75   3e-13
 sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp. ...    70   1e-11
 sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic OS=Gui...    69   2e-11
 sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanopho...    69   2e-11
 sp|P12410|ATPX_ANASP ATP synthase B' chain OS=Anabaena sp. (stra...    69   2e-11
 sp|Q02852|ATPX_ANTSP ATP synthase B' chain, chloroplastic OS=Ant...    65   2e-10
 sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp. ...    65   3e-10
 sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic OS=Cya...    65   4e-10
 sp|P35012|ATPX_GALSU ATP synthase B' chain, chloroplastic OS=Gal...    64   6e-10
 sp|Q00823|ATPX_ODOSI ATP synthase B' chain, chloroplastic OS=Odo...    60   8e-09
 sp|P27183|ATPX_SYNY3 ATP synthase B' chain OS=Synechocystis sp. ...    60   1e-08
 sp|Q40608|ATPX_OCHNE ATP synthase B' chain, chloroplastic OS=Och...    58   4e-08
 sp|P21904|ATPF_PROMO ATP synthase B chain, sodium ion specific O...    50   8e-06
 sp|P20601|ATPF_BACME ATP synthase B chain OS=Bacillus megaterium...    49   2e-05
 sp|P41172|ATPF_THIFE ATP synthase B chain OS=Thiobacillus ferroo...    44   0.001
 sp|Q7A0C4|ATPF_STAAW ATP synthase B chain OS=Staphylococcus aure...    40   0.009
 sp|Q6G7K3|ATPF_STAAS ATP synthase B chain OS=Staphylococcus aure...    40   0.009
 sp|Q6GEW8|ATPF_STAAR ATP synthase B chain OS=Staphylococcus aure...    40   0.009
 sp|Q7A4E7|ATPF_STAAN ATP synthase B chain OS=Staphylococcus aure...    40   0.009
 sp|Q99SF1|ATPF_STAAM ATP synthase B chain OS=Staphylococcus aure...    40   0.009
 sp|Q5HE93|ATPF_STAAC ATP synthase B chain OS=Staphylococcus aure...    40   0.009
 sp|O29104|VATE_ARCFU V-type ATP synthase subunit E OS=Archaeoglo...    40   0.015
 sp|Q5SHB3|CNPD_THET8 2',3'-cyclic-nucleotide 2'-phosphodiesteras...    40   0.015
 sp|Q49Z54|ATPF_STAS1 ATP synthase B chain OS=Staphylococcus sapr...    40   0.015
 sp|Q72HM1|CNPD_THET2 2',3'-cyclic-nucleotide 2'-phosphodiesteras...    39   0.019
 sp|Q48329|VATE_HALVO V-type ATP synthase subunit E OS=Halobacter...    39   0.025
 sp|A7GTL0|SYFA_BACCN Phenylalanyl-tRNA synthetase alpha chain OS...    39   0.033
 sp|Q15149|PLEC1_HUMAN Plectin-1 OS=Homo sapiens GN=PLEC1 PE=1 SV=3     38   0.043
 
 >sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic
 OS=Spinacia oleracea GN=ATPG PE=1 SV=2
 Length = 222
 
 Score =  132 bits (331), Expect = 2e-30
 Identities = 64/116 (55%), Positives = 88/116 (75%)
 Frame = +1
 
 Query: 325 KGKIFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKK 504
 K  +FDFNLTLPII AEFL LM  LD I++ P+   MD RD +I+++L  V+D S E+K+
 Sbjct: 80  KASLFDFNLTLPIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQ 139
 
 Query: 505 LQEQAEAILKAARAETTAELNKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQ 672
 L+EQA A+++AARAE +A LNKMK+ET  +++AKL E R++IE EL EA+ +LE Q
 Sbjct: 140 LEEQANAVMRAARAEISAALNKMKKETQLEVEAKLAEGRKKIEVELQEALGSLEQQ 195
 
 
 >sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic
 OS=Porphyra purpurea GN=atpG PE=3 SV=1
 Length = 158
 
 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 38/116 (32%), Positives = 70/116 (60%)
 Frame = +1
 
 Query: 325 KGKIFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKK 504
 +G +FDFN TLP++A +FL+LM+ L+ I++KPV K++D+RDE IR  L +      +  +
 Sbjct: 13  EGGLFDFNGTLPLMALQFLILMLLLNTIFYKPVTKILDERDEYIRTTLTTASSMLVKADE 72
 
 Query: 505 LQEQAEAILKAARAETTAELNKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQ 672
 L  + E  L  AR +  A++   +++  + +   +++++   EK + EA   L +Q
 Sbjct: 73  LAAKYEEDLSKARRDAQAKIAASQKDAQSIVSEDIKKAQMNAEKLITEASKQLNIQ 128
 
 
 >sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic
 OS=Porphyra yezoensis GN=atpG PE=3 SV=1
 Length = 156
 
 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 42/116 (36%), Positives = 67/116 (57%)
 Frame = +1
 
 Query: 325 KGKIFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKK 504
 +G +FDFN TLP++A +FL LMV L+ I++KPV KV+D+RDE IR  L +      +  +
 Sbjct: 13  EGGLFDFNGTLPLMALQFLTLMVLLNTIFYKPVTKVLDERDEYIRTTLTTASSMLVKADE 72
 
 Query: 505 LQEQAEAILKAARAETTAELNKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQ 672
 L  + E  L  AR     ++   ++E    +   +++++   EK +AEA   L VQ
 Sbjct: 73  LAAKYEEDLSEARRNAQLKIASSQKEAQNIVSEDIKKAQLNAEKLIAEASKQLNVQ 128
 
 
 >sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp.
 (strain PCC 6716) GN=atpG PE=3 SV=1
 Length = 159
 
 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 35/113 (30%), Positives = 65/113 (57%)
 Frame = +1
 
 Query: 334 IFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQE 513
 +FDF+ TLP++A +FL+L V L+ + +KP+ + +D+RDE IR  L   ++   +  +L
 Sbjct: 22  MFDFDATLPLMAVQFLILTVILNALLYKPLGQALDNRDEYIRTNLQQAKERLQQATELAN 81
 
 Query: 514 QAEAILKAARAETTAELNKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQ 672
 Q E  L   R E  A + + + E      A++  +++ ++ EL +A A ++ Q
 Sbjct: 82  QYEQELAYTRREAQAIIEEARAEAQKIATAEIAAAQQALQAELMKAQAEIDQQ 134
 
 
 >sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic
 OS=Guillardia theta GN=atpG PE=3 SV=1
 Length = 163
 
 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 37/116 (31%), Positives = 68/116 (58%)
 Frame = +1
 
 Query: 325 KGKIFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKK 504
 +G +FDFN TLP++A + LL MV L+ +++ PVAKV+D+R+E IR+ L    D   + +
 Sbjct: 18  EGGLFDFNATLPLMAVQILLFMVILNAVFYNPVAKVLDEREEYIRKNLTQASDILAKAEA 77
 
 Query: 505 LQEQAEAILKAARAETTAELNKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQ 672
 + +Q E  L   R E    ++  ++E    +  +++++++  E  + EA + L  Q
 Sbjct: 78  ITKQYEKDLAQERREAQLIISVAQKEAQDIVALEIKQAQKDTELLVNEATSQLNSQ 133
 
 
 >sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanophora
 paradoxa GN=atpG PE=3 SV=1
 Length = 164
 
 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 35/116 (30%), Positives = 65/116 (56%)
 Frame = +1
 
 Query: 325 KGKIFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKK 504
 +G +FDF+ TLP++  + L+LM+ L+ +++KP+ K++D+R E I+           +  +
 Sbjct: 18  EGGLFDFDATLPVMMVQLLVLMLILNAVFYKPLIKILDERKEYIQSNFNEAEKCLAQAAE 77
 
 Query: 505 LQEQAEAILKAARAETTAELNKMKRETAAKLDAKLQESRERIEKELAEAIANLEVQ 672
 L  Q E  +  AR   +   N  + E    +  KL+E++++ + ELA A   LE+Q
 Sbjct: 78  LTTQYETKITDARQNASKLTNTTRSEIQRFVSEKLEEAQKKADSELASATNKLELQ 133
 
 
 >sp|P12410|ATPX_ANASP ATP synthase B' chain OS=Anabaena sp. (strain
 PCC 7120) GN=atpG PE=3 SV=1
 Length = 163
 
 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
 Frame = +1
 
 Query: 325 KGKIFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKK 504
 +G +FD + TLP++A +FLLL + L+   +KP+ K +D R+E +R   +  ++   + +K
 Sbjct: 16  EGGLFDLDATLPLMAIQFLLLALILNATLYKPLGKAIDGRNEYVRNNQLEAQERLSKAEK 75
 
 Query: 505 LQEQAEAILKAAR-------AETTAELNKMKRETAAKLDAKLQESRER----IEKELAEA 651
 L E  E  L  AR       A+  AE  K+  E  A    + Q  RE+    IE++  +A
 Sbjct: 76  LAEAYEQELAGARRQAQTIIADAQAEAQKIAAEKVAAAQKEAQAQREQAAGEIEQQKQQA 135
 
 Query: 652 IANLEVQ 672
 +A+LE Q
 Sbjct: 136 LASLEQQ 142
 
 
 >sp|Q02852|ATPX_ANTSP ATP synthase B' chain, chloroplastic
 OS=Antithamnion sp. GN=atpG PE=3 SV=1
 Length = 159
 
 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 37/127 (29%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
 Frame = +1
 
 Query: 325 KGKIFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVR---DNSDE 495
 +G +FDFN TLP++A +FL L + L+ I++KP+ K++D+RDE I   L +       +++
 Sbjct: 18  QGGLFDFNATLPLMALQFLALTIILNLIYYKPLGKILDERDEYIANSLTAASAALSKAND 77
 
 Query: 496 IKKLQEQ--------AEAILKAARAETTAELNKMKRETAAKLDAKLQESRERIEKELAEA 651
 + K  EQ        A+ I+K A+ +    ++   +E     D  +  + +++  +  +A
 Sbjct: 78  LTKRYEQDLAESRKKAQDIIKNAQQDAQNIVSSKIKEAQKDADQLMSNTYDQLNIQKEQA 137
 
 Query: 652 IANLEVQ 672
 + NLE Q
 Sbjct: 138 LQNLEKQ 144
 
 
 >sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp.
 (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG
 PE=3 SV=1
 Length = 158
 
 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
 Frame = +1
 
 Query: 325 KGKIFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKK 504
 +G +FD + TLP++A + L+L+  L+ +++KP  KV+DDRD+ +R      +    E+K
 Sbjct: 16  EGGLFDLDATLPLMAVQILVLVFLLNAVFYKPFGKVLDDRDQFVRGGRQDAKARLAEVKA 75
 
 Query: 505 LQEQAEAILKAAR-------AETTAELNKMKRETAAKLDAKLQESRERIEKEL 642
 L  Q E  L A R       AE   E  ++  +  A+   + Q  RE+ ++E+
 Sbjct: 76  LTAQYEQELAATRKQSQALIAEAQTEAGRIAAQQLAEAQREAQAQREQAQQEI 128
 
 
 >sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic
 OS=Cyanidium caldarium GN=atpG PE=3 SV=1
 Length = 157
 
 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 32/112 (28%), Positives = 69/112 (61%)
 Frame = +1
 
 Query: 328 GKIFDFNLTLPIIAAEFLLLMVTLDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKL 507
 G +FDF+ TLP++A++FLL+M+ LD  ++KP+ KV+ DR+  I + L S    S++ K+
 Sbjct: 15  GGLFDFDATLPLMASQFLLIMLILDITFYKPINKVLKDRENYILKTLESATQISEKTKET 74
 
 Query: 508 QEQAEAILKAARAETTAELNKMKRETAAKLDAKLQESRERIEKELAEAIANL 663
 + E ++  ++ E+   ++ +K +T   +  +L +++    + ++++I  L
 Sbjct: 75  LARYEEVILKSKKESQQLIDSIKTKTEHDIVNELIQTQNSTREFISKSIKEL 126
 
 
 
 | 
  
    | TrEMBL  (release 39.9) | Link to BlastX Result : TrEMBL | 
  
    | tr_hit_id | A9RKV9 | 
  
    | Definition | tr|A9RKV9|A9RKV9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens | 
  
    | Align length | 144 | 
  
    | Score (bit) | 180.0 | 
  
    | E-value | 6.0e-44 | 
  
    | Report |  |