DK959106 |
Clone id |
TST39A01NGRL0003_M16 |
Library |
TST39 |
Length |
517 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_M16. 5' end sequence. |
Accession |
DK959106 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL459Contig1 |
Sequence |
CATGAAGGCGGCCCATGCGCCCCTTCTGTGTTCTTCTGCTTCGCACGTGTCCGCGTCCCG AGCAGGGGGTTGTGGACGTGGTCTTCTGCCGTCTCTCGCTTGTGGAGATTCCTTGCTGGC GTTGGTGCAGGAAATGAAGTCGACGGCACCTGCTTACTAGCGGGCGTTTTTCTACAACGA CGAGATGGAAGGTTCGGTTTCTACAGTCTGTGTGATGGCGCCATGCTGTGCCAATCCTCC TCAAATCGCTTCCGAGTTGGCTCATCATTGCGTGATGGGTTTGCATGTGGTTCCCAATTC TGGGTATGGACTGCGAGGGGTTTAAATACACTATTTCTGCGGTTGTAATTGTCAAGTGTT TCCGAGGCCTTGCGGGTAAGGGACTGCTCTCTTTCTTGAGAATGTCCTCTGGTGTGTTTT GATTCTTCCATGGGCTGTCATGCGATACTATAATGTGACTAAATGACCGCCTGAAGGGGT GGGGGGGGTTATGTCCAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8IYB3 |
Definition |
sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens |
Align length |
127 |
Score (bit) |
38.1 |
E-value |
0.022 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A4HLA8 |
Definition |
tr|A4HLA8|A4HLA8_LEIBR Sterol C-24 reductase, putative OS=Leishmania braziliensis |
Align length |
69 |
Score (bit) |
38.1 |
E-value |
0.23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959106|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_M16, 5' (496 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A4HLA8|A4HLA8_LEIBR Sterol C-24 reductase, putative OS=Leishm... 38 0.23 tr|B7Z7U0|B7Z7U0_HUMAN cDNA FLJ61739, highly similar to Serine/a... 38 0.23 tr|A9Z1X7|A9Z1X7_HUMAN Serine/arginine repetitive matrix 1 OS=Ho... 38 0.23 tr|A1CZT7|A1CZT7_NEOFI Putative uncharacterized protein OS=Neosa... 37 0.68 tr|Q6PEG8|Q6PEG8_DANRE Serine/arginine repetitive matrix 1 OS=Da... 36 0.86 tr|B4W0R3|B4W0R3_9CYAN Putative uncharacterized protein OS=Micro... 36 0.86 tr|B3KMI3|B3KMI3_HUMAN cDNA FLJ11087 fis, clone PLACE1005277, hi... 36 0.86 tr|A8K6Q9|A8K6Q9_HUMAN cDNA FLJ75882, highly similar to Homo sap... 36 0.86 tr|A1CSM3|A1CSM3_ASPCL Involucrin repeat protein, putative OS=As... 36 0.86 tr|B4EPE7|B4EPE7_BURCJ Putative peptidoglycan-binding membrane p... 35 1.5 tr|B6PGN5|B6PGN5_BRAFL Putative uncharacterized protein OS=Branc... 35 1.5 tr|A2QC70|A2QC70_ASPNC Contig An02c0060, complete genome OS=Aspe... 35 1.5 tr|B1G4T6|B1G4T6_9BURK Putative uncharacterized protein OS=Burkh... 35 1.5 tr|Q2TCS5|Q2TCS5_BRABE Tetraspanin family protein (Fragment) OS=... 35 2.0 tr|Q92TW2|Q92TW2_RHIME Putative uncharacterized protein OS=Rhizo... 35 2.5 tr|A7NH56|A7NH56_ROSCS Putative uncharacterized protein OS=Rosei... 35 2.5 tr|Q5K6T6|Q5K6T6_CRYNE Putative uncharacterized protein OS=Crypt... 35 2.5 tr|Q55H80|Q55H80_CRYNE Putative uncharacterized protein OS=Crypt... 35 2.5 tr|Q0CEW7|Q0CEW7_ASPTN Putative uncharacterized protein OS=Asper... 35 2.5 tr|A7ENQ4|A7ENQ4_SCLS1 Putative uncharacterized protein OS=Scler... 35 2.6 tr|Q297E6|Q297E6_DROPS GA19739 OS=Drosophila pseudoobscura pseud... 34 3.3 tr|B6K6S4|B6K6S4_SCHJP Survivin 2 OS=Schizosaccharomyces japonic... 34 3.3 tr|B0DDL7|B0DDL7_LACBS Predicted protein OS=Laccaria bicolor (st... 34 3.3 tr|Q4PI25|Q4PI25_USTMA Putative uncharacterized protein OS=Ustil... 34 4.3 tr|B8M2P3|B8M2P3_9EURO Putative uncharacterized protein OS=Talar... 34 4.3 tr|A7TRW3|A7TRW3_VANPO Putative uncharacterized protein OS=Vande... 34 4.3 tr|Q0ZNR2|Q0ZNR2_SULIS Putative TrbE protein OS=Sulfolobus islan... 34 4.4 tr|A2A8V9|A2A8V9_MOUSE Serine/arginine repetitive matrix 1 OS=Mu... 33 5.6 tr|A2A8V8|A2A8V8_MOUSE Serine/arginine repetitive matrix 1 OS=Mu... 33 5.6 tr|Q651G2|Q651G2_ORYSJ Os09g0100800 protein OS=Oryza sativa subs... 33 5.6
>tr|A4HLA8|A4HLA8_LEIBR Sterol C-24 reductase, putative OS=Leishmania braziliensis GN=LbrM33_V2.0720 PE=4 SV=1 Length = 500
Score = 38.1 bits (87), Expect = 0.23 Identities = 22/69 (31%), Positives = 29/69 (42%) Frame = -3
Query: 422 SKHTRGHSQEREQSLTRKASETLDNYNRRNSVFKPLAVHTQNWEPHANPSRNDEPTRKRF 243 S H S+ R +S TRKAS T N RR V P + +A R P + + Sbjct: 8 SNHVAPRSRSRSRSRTRKASRTRSNTPRRTKVLTPEEAY------YATVERKFTPEKDEW 61
Query: 242 EEDWHSMAP 216 E+W P Sbjct: 62 NEEWEFQGP 70
>tr|B7Z7U0|B7Z7U0_HUMAN cDNA FLJ61739, highly similar to Serine/arginine repetitive matrix protein 1 OS=Homo sapiens PE=2 SV=1 Length = 916
Score = 38.1 bits (87), Expect = 0.23 Identities = 36/127 (28%), Positives = 52/127 (40%) Frame = -3
Query: 485 PPPLQAVI*SHYSIA*QPMEESKHTRGHSQEREQSLTRKASETLDNYNRRNSVFKPLAVH 306 PPP Q S + P SKH +G S R TR+A N R + +P A Sbjct: 651 PPPKQRS--SPVTKRRSPSLSSKHRKGSSPSRS---TREARSPQPN-KRHSPSPRPRAPQ 704
Query: 305 TQNWEPHANPSRNDEPTRKRFEEDWHSMAPSHRL*KPNLPSRRCRKTPASKQVPSTSFPA 126 T + P + P R++ S +PS R P RR +TP K++ + P+ Sbjct: 705 TSSSPPPVRRGASSSPQRRQ------SPSPSTR------PIRRVSRTPEPKKIKKAASPS 752
Query: 125 PTPARNL 105 P R + Sbjct: 753 PQSVRRV 759
>tr|A9Z1X7|A9Z1X7_HUMAN Serine/arginine repetitive matrix 1 OS=Homo sapiens GN=SRRM1 PE=4 SV=1 Length = 913
Score = 38.1 bits (87), Expect = 0.23 Identities = 36/127 (28%), Positives = 52/127 (40%) Frame = -3
Query: 485 PPPLQAVI*SHYSIA*QPMEESKHTRGHSQEREQSLTRKASETLDNYNRRNSVFKPLAVH 306 PPP Q S + P SKH +G S R TR+A N R + +P A Sbjct: 648 PPPKQRS--SPVTKRRSPSLSSKHRKGSSPSRS---TREARSPQPN-KRHSPSPRPRAPQ 701
Query: 305 TQNWEPHANPSRNDEPTRKRFEEDWHSMAPSHRL*KPNLPSRRCRKTPASKQVPSTSFPA 126 T + P + P R++ S +PS R P RR +TP K++ + P+ Sbjct: 702 TSSSPPPVRRGASSSPQRRQ------SPSPSTR------PIRRVSRTPEPKKIKKAASPS 749
Query: 125 PTPARNL 105 P R + Sbjct: 750 PQSVRRV 756
>tr|A1CZT7|A1CZT7_NEOFI Putative uncharacterized protein OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_038310 PE=4 SV=1 Length = 602
Score = 36.6 bits (83), Expect = 0.68 Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 6/107 (5%) Frame = -1
Query: 322 NPSQSIPRIGNHMQTHHAMMSQLGSDLRRIGTAWRHHTDCRNRTFHLVVVEKRPLVSRCR 143 +P+Q IPR H Q+HH Q R +G AWR RN + +RP S C Sbjct: 497 DPNQ-IPR---HTQSHHHRPHQQFEQYRTMGPAWR-----RNDVEIIYPSTRRPRSSTCG 547
Query: 142 RLHFLHQ------RQQGISTSERRQKTTSTTPCSGRGHVRSRRTQKG 20 R+ L R+ G S E R TT T GR + T +G Sbjct: 548 RIASLGHGPLDSIRETGSSVDEAR--TTVTLDDQGRRTILDGNTYRG 592
>tr|Q6PEG8|Q6PEG8_DANRE Serine/arginine repetitive matrix 1 OS=Danio rerio GN=srrm1 PE=1 SV=1 Length = 896
Score = 36.2 bits (82), Expect = 0.86 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 10/100 (10%) Frame = -3
Query: 275 SRNDEPTRKRFEEDWHSMAPSHRL*KPNLP-SRRCRKTPASKQVPSTSFPAPTPAR---- 111 SR P ++R S P HR PN P ++R R T +S +T + P R Sbjct: 683 SRGTSPGKRRTPPSSASPPPRHRRNSPNPPAAQRGRDTRSSPPAHTTRVSSSPPGRYGAS 742
Query: 110 ----NLHKRETAEDHVHNPLLG-TRTRAKQKNTEGAHGPP 6 +R+T+ H P+ +RT +K+ G+ PP Sbjct: 743 GSSPQRQRRQTSPSHSTRPIRRVSRTPEPRKSQRGSQSPP 782
>tr|B4W0R3|B4W0R3_9CYAN Putative uncharacterized protein OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_8280 PE=4 SV=1 Length = 858
Score = 36.2 bits (82), Expect = 0.86 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 11/140 (7%) Frame = -3
Query: 398 QEREQSLTRKASETLDNYNRRNSVFKPLAVHTQNWEPHANPSRNDEPTRKRFEEDWHSMA 219 QE+E L R+ TL ++ V+KP P A P ++ PTRKR + A Sbjct: 60 QEQEDQLIREY--TLPTTPQKEPVYKPA--------PAAPPKKSTSPTRKR-----TTPA 104
Query: 218 PSHRL*KPNLPSRRCRKTPASKQVPSTSFPAPTPARNLHKRETAE-------DHV----H 72 PS P R T + P+ + +P P+ + ETAE ++V Sbjct: 105 PSQP--PPQSQPTRSAPTSTEPEEPAPARRSPAPSSPAREEETAEAEPLPTGEYVLQFNR 162
Query: 71 NPLLGTRTRAKQKNTEGAHG 12 +P++G R R + +E G Sbjct: 163 SPIVGNRFRFRGVYSEARLG 182
>tr|B3KMI3|B3KMI3_HUMAN cDNA FLJ11087 fis, clone PLACE1005277, highly similar to Spartin OS=Homo sapiens GN=SPG20 PE=2 SV=1 Length = 440
Score = 36.2 bits (82), Expect = 0.86 Identities = 39/124 (31%), Positives = 50/124 (40%), Gaps = 7/124 (5%) Frame = -3
Query: 428 EESKHTRGHSQEREQSLTRKASETLDNYNRRNSVF-KPLAVHTQNWEPHANPSRNDEPTR 252 +ES+HT G E + + +K ETL N R + K LA QN + P + Sbjct: 62 KESEHT-GPGWESARQMQQKMKETLQNVRTRLEILEKGLATSLQNDLQEVPKLYPEFPPK 120
Query: 251 ----KRFEEDWHSMAPSHRL*KPNL--PSRRCRKTPASKQVPSTSFPAPTPARNLHKRET 90 K E S AP H N PS PAS +PS S PA P + + Sbjct: 121 DMCEKLPEPQSFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQSCPAEAPP--AYTPQA 178
Query: 89 AEDH 78 AE H Sbjct: 179 AEGH 182
>tr|A8K6Q9|A8K6Q9_HUMAN cDNA FLJ75882, highly similar to Homo sapiens spastic paraplegia 20, spartin (Troyer syndrome) (SPG20), mRNA OS=Homo sapiens PE=2 SV=1 Length = 666
Score = 36.2 bits (82), Expect = 0.86 Identities = 39/124 (31%), Positives = 50/124 (40%), Gaps = 7/124 (5%) Frame = -3
Query: 428 EESKHTRGHSQEREQSLTRKASETLDNYNRRNSVF-KPLAVHTQNWEPHANPSRNDEPTR 252 +ES+HT G E + + +K ETL N R + K LA QN + P + Sbjct: 62 KESEHT-GPGWESARQMQQKMKETLQNVRTRLEILEKGLATSLQNDLQEVPKLYPEFPPK 120
Query: 251 ----KRFEEDWHSMAPSHRL*KPNL--PSRRCRKTPASKQVPSTSFPAPTPARNLHKRET 90 K E S AP H N PS PAS +PS S PA P + + Sbjct: 121 DMCEKLPEPQSFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQSCPAEAPP--AYTPQA 178
Query: 89 AEDH 78 AE H Sbjct: 179 AEGH 182
>tr|A1CSM3|A1CSM3_ASPCL Involucrin repeat protein, putative OS=Aspergillus clavatus GN=ACLA_079940 PE=4 SV=1 Length = 5853
Score = 36.2 bits (82), Expect = 0.86 Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 3/122 (2%) Frame = -3
Query: 425 ESKHTRGHSQEREQSLTRKASETLDNYNRRNSVFKPLAVHTQNWEPHANPSRNDEPTRKR 246 ES + Q E+ S++L+ + + P V T P A+PS EP Sbjct: 2799 ESADPKPEEQSIEEKAPESESQSLEK-EQTEATEAPAEVDTSTVIPDASPSEQHEPQNTE 2857
Query: 245 FEEDWHSMAPSHRL*KPNLPSRRCRKTPASKQVPSTSFPAPTPARNLHK---RETAEDHV 75 + +P+ ++ P+ P++ TP + + P TS + +N K + TAE V Sbjct: 2858 VSIPANEPSPTEQVAAPSEPTQNEESTPIAAE-PETSLSRKSSKKNKKKNKRKSTAETPV 2916
Query: 74 HN 69 + Sbjct: 2917 ED 2918
>tr|B4EPE7|B4EPE7_BURCJ Putative peptidoglycan-binding membrane protein OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=BceJ2315_70120 PE=4 SV=1 Length = 4557
Score = 35.4 bits (80), Expect = 1.5 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 1/78 (1%) Frame = -3
Query: 254 RKRFEEDWHSMAPSHRL*KPNLPSRRCRKTPASKQV-PSTSFPAPTPARNLHKRETAEDH 78 R F D APS + K +PSR + PAS P+ S P TPA R TA + Sbjct: 1229 RLSFGSDGEINAPSKLVAKTPVPSRNAPRQPASNDTPPADSAPRTTPANEAAARATAAND 1288
Query: 77 VHNPLLGTRTRAKQKNTE 24 R Q +E Sbjct: 1289 TATATTAASARNAQHTSE 1306
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