NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959124
Clone id TST39A01NGRL0003_N10
Library
Length 663
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_N10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGGATTTTGGAGAGAGAGAGAGAGAGGCAGGTAGAAAGTTCGAGCAGAGAGACACGTTAG
ATTAGTTTGCTCGCAGGTGAAAGATCGAGGAAAGTTAGTTGGCCAGCTCGCTTCTGTGCA
TAGCTATGGCGGCAGCTGTAGCAAGCTCCTCTTCTGTCTCCTCTCTGCACAGTGCCGCCC
TGTGCCCGTCCTCCTCATCAGCAGCTTCTTCCTTGAAGTCCTGCCCCTCTCTCTCCTTCG
CCCCCTCCAATGGCTCTCGCCTTGTTTGCATGGCCACTAAGAAGGTCTCTTCTCGGCCCT
CCTCCGGCAAGAAGTCGTGGCTTCCCGGGGTTAGGGGAGGTGGCAACCTTGTGGATCCTG
AATGGCTTGATGGATCGCTTCCCGGCGACTATGGCTTTGATCCCCTTGGACTTGGAAAGG
ATCCAGCTGCCTTGAAATGGTACCGTGAGGCTGAAATCATCCATGGAAGATGGGCAATGG
CAGCTGTGGTGGGAATCTTTGTGGGGCAAGCATGGAGTGGAGTCCCCTGGTTCGAAGCTG
GAGCTCAACCTGGAGCAGTTGCTCCCTTCTCTTTCGGAACGCTGCTGGGTACTCAACTGT
TGTTGATGGGATGGGTTGAGAGCAAGAGATGGGTTGACTTCTTTGACACTGGCTCCCAAT
CTA
■■Homology search results ■■ -
sp_hit_id P27524
Definition sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum
Align length 128
Score (bit) 220.0
E-value 5.0e-57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959124|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_N10, 5'
         (663 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...   220   5e-57
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...   214   2e-55
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...   211   3e-54
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    99   2e-20
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    92   2e-18
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    85   4e-16
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    84   9e-16
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    80   1e-14
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    76   1e-13
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...    72   2e-12
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    68   5e-11
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    67   6e-11
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    66   1e-10
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    66   2e-10
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    64   9e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    64   9e-10
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    63   2e-09
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...    62   2e-09
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...    62   4e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    61   5e-09
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    61   6e-09
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...    61   6e-09
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...    61   6e-09
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    61   6e-09
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    61   6e-09
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    61   6e-09
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    61   6e-09
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...    60   8e-09
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    60   8e-09
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...    60   8e-09

>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score =  220 bits (561), Expect = 5e-57
 Identities = 99/128 (77%), Positives = 108/128 (84%)
 Frame = +3

Query: 279 KKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEI 458
           K+ +   ++ KKSW+P VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+
Sbjct: 42  KRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL 101

Query: 459 IHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVD 638
           IHGRWAMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVD
Sbjct: 102 IHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVD 161

Query: 639 FFDTGSQS 662
           FFD  SQS
Sbjct: 162 FFDPDSQS 169


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score =  214 bits (546), Expect = 2e-55
 Identities = 96/126 (76%), Positives = 106/126 (84%)
 Frame = +3

Query: 285 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIH 464
           V++   + KKSW+P V+ GGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IH
Sbjct: 44  VAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 103

Query: 465 GRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 644
           GRWAMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF
Sbjct: 104 GRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF 163

Query: 645 DTGSQS 662
           D  SQS
Sbjct: 164 DNDSQS 169


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score =  211 bits (537), Expect = 3e-54
 Identities = 94/126 (74%), Positives = 105/126 (83%)
 Frame = +3

Query: 285 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIH 464
           V +  ++ KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IH
Sbjct: 49  VVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 108

Query: 465 GRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 644
           GRWAM AV+GIFVGQAW+G+PWFEAGA PGAVAPFSF          MGWVESKRWVDFF
Sbjct: 109 GRWAMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFF 168

Query: 645 DTGSQS 662
           D  SQS
Sbjct: 169 DPDSQS 174


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 55/140 (39%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
 Frame = +3

Query: 252 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 431
           GSR V  A   V++ P   +  W PG         PEWLDGSLPGD+GFDPLGLG DP +
Sbjct: 50  GSRSV--AVSAVAADPD--RPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPES 99

Query: 432 LKWYREAEIIHGRWAMAAVVGIFVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXX 593
           LKW  +AE++H RWAM    GIF+ +  + +       W+ AG Q       +       
Sbjct: 100 LKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTL---FVI 156

Query: 594 XXXXMGWVESKRWVDFFDTG 653
               +GW E +RW D    G
Sbjct: 157 ELVLIGWAEGRRWADIIKPG 176



 Score = 40.0 bits (92), Expect = 0.011
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 369 DGSLPGDYGFDPLGLGK-DPAALKWYREAEIIHGRWAMAAVVGIFVGQAWSG 521
           D   PG   FDPLG G   PA +K  R  EI +GR AM AV+G +    ++G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
 Frame = +3

Query: 318 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGI 497
           W PG         P WLDGSLPGD+GFDPLGL  DP +L+W ++AE++H RWAM    GI
Sbjct: 68  WFPGS------TPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 121

Query: 498 FVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTG 653
           F+ +  + +       W+ AG Q       +           +GW E +RW D    G
Sbjct: 122 FIPELLTKIGILNTPSWYTAGEQEYFTDTTTL---FIVELVLIGWAEGRRWADIIKPG 176



 Score = 40.0 bits (92), Expect = 0.011
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 369 DGSLPGDYGFDPLGLGK-DPAALKWYREAEIIHGRWAMAAVVGIFVGQAWSG 521
           D   PG   FDPLG G   PA +K  R  EI +GR AM AV+G +    ++G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 84.7 bits (208), Expect = 4e-16
 Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
 Frame = +3

Query: 273 ATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREA 452
           + K  S +  + K  WLPG      L  P++L GSL GD GFDPLGL +DP  LKW+ +A
Sbjct: 42  SAKTSSFKVEAKKGEWLPG------LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQA 95

Query: 453 EIIHGRWAMAAVVGIFVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXXXXXXMGW 614
           E+++GRWAM  V G+ + + ++ +       W++AG +       S             +
Sbjct: 96  ELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFILFHY 152

Query: 615 VESKRWVDFFDTGS 656
           VE +RW D  + GS
Sbjct: 153 VEIRRWQDIKNPGS 166


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 83.6 bits (205), Expect = 9e-16
 Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
 Frame = +3

Query: 288 SSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHG 467
           S +  + K  WLPG      L  P +L GSLPGD GFDPLGL +DP  L+W+ +AE+++G
Sbjct: 46  SFKVEAKKGEWLPG------LASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG 99

Query: 468 RWAMAAVVGIFVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKR 629
           RWAM  V G+ + + ++ +       W+ AG +    +  +             +VE +R
Sbjct: 100 RWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSH---YVEIRR 156

Query: 630 WVDFFDTGS 656
           W D  + GS
Sbjct: 157 WQDIKNPGS 165


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 80.1 bits (196), Expect = 1e-14
 Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
 Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
           K SWLPG++       P +LDGSL GD GFDPL L +DP  L+W+ +A++++GRWAM  V
Sbjct: 33  KGSWLPGLQS------PAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGV 86

Query: 489 VGIFVGQAWSGVPWFEAG---AQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGS 656
            G+ + +  +      A      PG    F+             +VE +RW D  + GS
Sbjct: 87  AGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGS 145


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +3

Query: 318 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGI 497
           W+PG         P +LDGS PGD+GFD LGLG+ PA L+ Y+E+E+IH RWAM AV GI
Sbjct: 49  WMPGQPR------PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGI 102

Query: 498 FVGQAWSGVPWFEA---GAQPGAVAPF 569
            V +A     W +A    A PG  A +
Sbjct: 103 IVPEALGLGNWVKAQEWAAIPGGQATY 129



 Score = 38.9 bits (89), Expect = 0.024
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 396 FDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGIFVGQA 512
           FDPLG  KDPA  +  +  EI +GR A+ A+VG  V Q+
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQS 211


>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1
           SV=1
          Length = 287

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 57/186 (30%), Positives = 75/186 (40%), Gaps = 58/186 (31%)
 Frame = +3

Query: 246 SNGSRLVC---MATKKVSSRPS----SGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDP 404
           SN SR        TKK S + +    S +  W PG +       PE+LDGSL GDYGFDP
Sbjct: 24  SNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPGAKS------PEYLDGSLVGDYGFDP 77

Query: 405 LGLGK--------------------------------DPAA-----------LKWYREAE 455
            GLGK                                DP +           L+ +RE E
Sbjct: 78  FGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECE 137

Query: 456 IIHGRWAMAAVVGIFVGQAWSGVPWFEAG--------AQPGAVAPFSFXXXXXXXXXXMG 611
           +IHGRWAM A +G    +  +GV W +AG        +  G   PFS           +G
Sbjct: 138 LIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIG 197

Query: 612 WVESKR 629
           ++E +R
Sbjct: 198 YIEFQR 203



 Score = 38.1 bits (87), Expect = 0.042
 Identities = 21/47 (44%), Positives = 24/47 (51%)
 Frame = +3

Query: 381 PGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGIFVGQAWSG 521
           PG   FDPLGL  DP      + AEI H R AM   +G  V  A +G
Sbjct: 215 PGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATG 261
tr_hit_id A9RU32
Definition tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 132
Score (bit) 226.0
E-value 1.0e-57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959124|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_N10, 5'
         (663 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella paten...   226   1e-57
tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromos...   217   5e-55
tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24 OS=P...   216   1e-54
tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24 ...   216   1e-54
tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Popul...   213   6e-54
tr|B3VV93|B3VV93_POPTN Chloroplast light-harvesting complex II p...   213   8e-54
tr|B3VV83|B3VV83_POPTN Chloroplast light-harvesting complex II p...   213   8e-54
tr|B3VV74|B3VV74_POPTN Chloroplast light-harvesting complex II p...   213   8e-54
tr|A9PK00|A9PK00_POPJC Putative uncharacterized protein OS=Popul...   213   8e-54
tr|A9PGD4|A9PGD4_POPTR Putative uncharacterized protein OS=Popul...   213   8e-54
tr|B3VV84|B3VV84_POPTN Chloroplast light-harvesting complex II p...   211   2e-53
tr|Q9XF90|Q9XF90_ARATH Lhcb6 protein OS=Arabidopsis thaliana GN=...   211   3e-53
tr|Q9LMQ2|Q9LMQ2_ARATH F7H2.16 protein (Chlorophyll A-B binding ...   211   3e-53
tr|B3VV80|B3VV80_POPTN Chloroplast light-harvesting complex II p...   211   4e-53
tr|Q6DV17|Q6DV17_BRARP Lhcb6 protein (Fragment) OS=Brassica rapa...   210   7e-53
tr|B3VV72|B3VV72_POPTN Chloroplast light-harvesting complex II p...   209   9e-53
tr|B3VV73|B3VV73_POPTN Chloroplast light-harvesting complex II p...   208   2e-52
tr|B3VV82|B3VV82_POPTN Chloroplast light-harvesting complex II p...   206   1e-51
tr|B8PYF9|B8PYF9_9POAL Chloroplast a/b binding protein cab-PhE11...   200   6e-50
tr|B4FXB0|B4FXB0_MAIZE Chlorophyll a-b binding protein CP24 OS=Z...   197   5e-49
tr|B6T037|B6T037_MAIZE Chlorophyll a-b binding protein CP24 OS=Z...   197   6e-49
tr|Q7XV11|Q7XV11_ORYSJ Os04g0457000 protein OS=Oryza sativa subs...   196   1e-48
tr|A2XU61|A2XU61_ORYSI Putative uncharacterized protein OS=Oryza...   196   1e-48
tr|Q01JQ3|Q01JQ3_ORYSA H0523F07.10 protein OS=Oryza sativa GN=H0...   194   4e-48
tr|Q41748|Q41748_MAIZE Chlorophyll a/b-binding apoprotein CP24 O...   193   7e-48
tr|A3AUG3|A3AUG3_ORYSJ Putative uncharacterized protein OS=Oryza...   132   2e-29
tr|Q5BMR6|Q5BMR6_FRAAN Chloroplast chlorophyll a/b-binding prote...   129   2e-28
tr|A9PJQ2|A9PJQ2_POPJC Putative uncharacterized protein OS=Popul...   108   4e-22
tr|A7PDT5|A7PDT5_VITVI Chromosome chr11 scaffold_13, whole genom...   107   5e-22
tr|A5BBT6|A5BBT6_VITVI Putative uncharacterized protein OS=Vitis...   107   5e-22

>tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_119427 PE=4 SV=1
          Length = 219

 Score =  226 bits (575), Expect = 1e-57
 Identities = 102/132 (77%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
 Frame = +3

Query: 270 MATKKVSSRPSSG-KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYR 446
           MATKKVS+RP++G KKSW+P V+GGGNL DPEWLDGSLPGDYGFDPLGLG+DPAALKWYR
Sbjct: 1   MATKKVSARPAAGGKKSWIPAVKGGGNLTDPEWLDGSLPGDYGFDPLGLGRDPAALKWYR 60

Query: 447 EAEIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESK 626
           EAE+IHGRWAMAAVVGIFVGQ WSGVPWFEAGA P A+APFSF          MGWVE+K
Sbjct: 61  EAELIHGRWAMAAVVGIFVGQGWSGVPWFEAGADPAALAPFSFGSLLGTQLLLMGWVETK 120

Query: 627 RWVDFFDTGSQS 662
           RW+DF + G+QS
Sbjct: 121 RWIDFLNPGTQS 132


>tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_238, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00009554001 PE=4 SV=1
          Length = 257

 Score =  217 bits (553), Expect = 5e-55
 Identities = 99/118 (83%), Positives = 103/118 (87%)
 Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
           KKSWLPGV+ GGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53  KKSWLPGVKAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
           VGIFVGQAWSG+PWFEAGA PGAVAPFSF          MGWVESKRWVDFF+  SQS
Sbjct: 113 VGIFVGQAWSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQS 170


>tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24
           OS=Phaseolus aureus GN=CipCp24 PE=2 SV=2
          Length = 258

 Score =  216 bits (549), Expect = 1e-54
 Identities = 97/118 (82%), Positives = 103/118 (87%)
 Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
           KKSW+PGVRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 54  KKSWIPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 113

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
           +GIFVGQAWSGVPWFEAGA P A+APFSF          MGWVESKRWVDFF+  SQS
Sbjct: 114 LGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQS 171


>tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24
           OS=Nicotiana tabacum GN=Lhcb6 PE=2 SV=1
          Length = 257

 Score =  216 bits (549), Expect = 1e-54
 Identities = 99/138 (71%), Positives = 114/138 (82%), Gaps = 2/138 (1%)
 Frame = +3

Query: 255 SRLVCMATKK--VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 428
           +R+  +AT K  + +  ++ KKSW+P V+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPA
Sbjct: 33  ARIGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPA 92

Query: 429 ALKWYREAEIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXM 608
            LKWYREAE+IHGRWAMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSF          M
Sbjct: 93  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLM 152

Query: 609 GWVESKRWVDFFDTGSQS 662
           GWVESKRWVDFF+  SQS
Sbjct: 153 GWVESKRWVDFFNPESQS 170


>tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 257

 Score =  213 bits (543), Expect = 6e-54
 Identities = 95/118 (80%), Positives = 103/118 (87%)
 Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
           KKSW+P V+GGG+LVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53  KKSWIPAVKGGGSLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
           +GIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF+  SQS
Sbjct: 113 LGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQS 170


>tr|B3VV93|B3VV93_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  213 bits (542), Expect = 8e-54
 Identities = 95/118 (80%), Positives = 102/118 (86%)
 Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF+  SQS
Sbjct: 79  VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 136


>tr|B3VV83|B3VV83_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  213 bits (542), Expect = 8e-54
 Identities = 95/118 (80%), Positives = 102/118 (86%)
 Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF+  SQS
Sbjct: 79  VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 136


>tr|B3VV74|B3VV74_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  213 bits (542), Expect = 8e-54
 Identities = 95/118 (80%), Positives = 102/118 (86%)
 Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF+  SQS
Sbjct: 79  VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 136


>tr|A9PK00|A9PK00_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 257

 Score =  213 bits (542), Expect = 8e-54
 Identities = 95/118 (80%), Positives = 102/118 (86%)
 Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF+  SQS
Sbjct: 113 VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 170


>tr|A9PGD4|A9PGD4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 257

 Score =  213 bits (542), Expect = 8e-54
 Identities = 95/118 (80%), Positives = 102/118 (86%)
 Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
           VGIFVGQAWSG+PWFEAGA PGA+APFSF          MGWVESKRWVDFF+  SQS
Sbjct: 113 VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 170