DK959124
Clone id TST39A01NGRL0003_N10
Library
Length 663
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_N10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGGATTTTGGAGAGAGAGAGAGAGAGGCAGGTAGAAAGTTCGAGCAGAGAGACACGTTAG
ATTAGTTTGCTCGCAGGTGAAAGATCGAGGAAAGTTAGTTGGCCAGCTCGCTTCTGTGCA
TAGCTATGGCGGCAGCTGTAGCAAGCTCCTCTTCTGTCTCCTCTCTGCACAGTGCCGCCC
TGTGCCCGTCCTCCTCATCAGCAGCTTCTTCCTTGAAGTCCTGCCCCTCTCTCTCCTTCG
CCCCCTCCAATGGCTCTCGCCTTGTTTGCATGGCCACTAAGAAGGTCTCTTCTCGGCCCT
CCTCCGGCAAGAAGTCGTGGCTTCCCGGGGTTAGGGGAGGTGGCAACCTTGTGGATCCTG
AATGGCTTGATGGATCGCTTCCCGGCGACTATGGCTTTGATCCCCTTGGACTTGGAAAGG
ATCCAGCTGCCTTGAAATGGTACCGTGAGGCTGAAATCATCCATGGAAGATGGGCAATGG
CAGCTGTGGTGGGAATCTTTGTGGGGCAAGCATGGAGTGGAGTCCCCTGGTTCGAAGCTG
GAGCTCAACCTGGAGCAGTTGCTCCCTTCTCTTTCGGAACGCTGCTGGGTACTCAACTGT
TGTTGATGGGATGGGTTGAGAGCAAGAGATGGGTTGACTTCTTTGACACTGGCTCCCAAT
CTA
■■Homology search results ■■ -
sp_hit_id P27524
Definition sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum
Align length 128
Score (bit) 220.0
E-value 5.0e-57
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959124|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_N10, 5'
(663 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c... 220 5e-57
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c... 214 2e-55
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro... 211 3e-54
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas... 99 2e-20
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl... 92 2e-18
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl... 85 4e-16
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla... 84 9e-16
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl... 80 1e-14
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 76 1e-13
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl... 72 2e-12
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ... 68 5e-11
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ... 67 6e-11
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty... 66 1e-10
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ... 66 2e-10
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F... 64 9e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 64 9e-10
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 63 2e-09
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop... 62 2e-09
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 62 4e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 61 5e-09
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 61 6e-09
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 61 6e-09
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 61 6e-09
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 61 6e-09
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas... 61 6e-09
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas... 61 6e-09
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen... 61 6e-09
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 60 8e-09
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 60 8e-09
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas... 60 8e-09

>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
SV=1
Length = 256

Score = 220 bits (561), Expect = 5e-57
Identities = 99/128 (77%), Positives = 108/128 (84%)
Frame = +3

Query: 279 KKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEI 458
K+ + ++ KKSW+P VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+
Sbjct: 42 KRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL 101

Query: 459 IHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVD 638
IHGRWAMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSF MGWVESKRWVD
Sbjct: 102 IHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVD 161

Query: 639 FFDTGSQS 662
FFD SQS
Sbjct: 162 FFDPDSQS 169


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
SV=1
Length = 256

Score = 214 bits (546), Expect = 2e-55
Identities = 96/126 (76%), Positives = 106/126 (84%)
Frame = +3

Query: 285 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIH 464
V++ + KKSW+P V+ GGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IH
Sbjct: 44 VAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 103

Query: 465 GRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 644
GRWAMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSF MGWVESKRWVDFF
Sbjct: 104 GRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF 163

Query: 645 DTGSQS 662
D SQS
Sbjct: 164 DNDSQS 169


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
chloroplastic OS=Spinacia oleracea PE=2 SV=1
Length = 261

Score = 211 bits (537), Expect = 3e-54
Identities = 94/126 (74%), Positives = 105/126 (83%)
Frame = +3

Query: 285 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIH 464
V + ++ KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IH
Sbjct: 49 VVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 108

Query: 465 GRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFF 644
GRWAM AV+GIFVGQAW+G+PWFEAGA PGAVAPFSF MGWVESKRWVDFF
Sbjct: 109 GRWAMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFF 168

Query: 645 DTGSQS 662
D SQS
Sbjct: 169 DPDSQS 174


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
OS=Petunia hybrida PE=2 SV=1
Length = 270

Score = 99.4 bits (246), Expect = 2e-20
Identities = 55/140 (39%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Frame = +3

Query: 252 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 431
GSR V A V++ P + W PG PEWLDGSLPGD+GFDPLGLG DP +
Sbjct: 50 GSRSV--AVSAVAADPD--RPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPES 99

Query: 432 LKWYREAEIIHGRWAMAAVVGIFVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXX 593
LKW +AE++H RWAM GIF+ + + + W+ AG Q +
Sbjct: 100 LKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTL---FVI 156

Query: 594 XXXXMGWVESKRWVDFFDTG 653
+GW E +RW D G
Sbjct: 157 ELVLIGWAEGRRWADIIKPG 176



Score = 40.0 bits (92), Expect = 0.011
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3

Query: 369 DGSLPGDYGFDPLGLGK-DPAALKWYREAEIIHGRWAMAAVVGIFVGQAWSG 521
D PG FDPLG G PA +K R EI +GR AM AV+G + ++G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Length = 270

Score = 92.0 bits (227), Expect = 2e-18
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Frame = +3

Query: 318 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGI 497
W PG P WLDGSLPGD+GFDPLGL DP +L+W ++AE++H RWAM GI
Sbjct: 68 WFPGS------TPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 121

Query: 498 FVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTG 653
F+ + + + W+ AG Q + +GW E +RW D G
Sbjct: 122 FIPELLTKIGILNTPSWYTAGEQEYFTDTTTL---FIVELVLIGWAEGRRWADIIKPG 176



Score = 40.0 bits (92), Expect = 0.011
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3

Query: 369 DGSLPGDYGFDPLGLGK-DPAALKWYREAEIIHGRWAMAAVVGIFVGQAWSG 521
D PG FDPLG G PA +K R EI +GR AM AV+G + ++G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
Length = 251

Score = 84.7 bits (208), Expect = 4e-16
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Frame = +3

Query: 273 ATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREA 452
+ K S + + K WLPG L P++L GSL GD GFDPLGL +DP LKW+ +A
Sbjct: 42 SAKTSSFKVEAKKGEWLPG------LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQA 95

Query: 453 EIIHGRWAMAAVVGIFVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXXXXXXMGW 614
E+++GRWAM V G+ + + ++ + W++AG + S +
Sbjct: 96 ELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFILFHY 152

Query: 615 VESKRWVDFFDTGS 656
VE +RW D + GS
Sbjct: 153 VEIRRWQDIKNPGS 166


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
Length = 252

Score = 83.6 bits (205), Expect = 9e-16
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Frame = +3

Query: 288 SSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHG 467
S + + K WLPG L P +L GSLPGD GFDPLGL +DP L+W+ +AE+++G
Sbjct: 46 SFKVEAKKGEWLPG------LASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG 99

Query: 468 RWAMAAVVGIFVGQAWSGV------PWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKR 629
RWAM V G+ + + ++ + W+ AG + + + +VE +R
Sbjct: 100 RWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSH---YVEIRR 156

Query: 630 WVDFFDTGS 656
W D + GS
Sbjct: 157 WQDIKNPGS 165


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
PE=1 SV=1
Length = 231

Score = 80.1 bits (196), Expect = 1e-14
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
K SWLPG++ P +LDGSL GD GFDPL L +DP L+W+ +A++++GRWAM V
Sbjct: 33 KGSWLPGLQS------PAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGV 86

Query: 489 VGIFVGQAWSGVPWFEAG---AQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGS 656
G+ + + + A PG F+ +VE +RW D + GS
Sbjct: 87 AGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGS 145


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
Length = 246

Score = 76.3 bits (186), Expect = 1e-13
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +3

Query: 318 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGI 497
W+PG P +LDGS PGD+GFD LGLG+ PA L+ Y+E+E+IH RWAM AV GI
Sbjct: 49 WMPGQPR------PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGI 102

Query: 498 FVGQAWSGVPWFEA---GAQPGAVAPF 569
V +A W +A A PG A +
Sbjct: 103 IVPEALGLGNWVKAQEWAAIPGGQATY 129



Score = 38.9 bits (89), Expect = 0.024
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3

Query: 396 FDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGIFVGQA 512
FDPLG KDPA + + EI +GR A+ A+VG V Q+
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQS 211


>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2,
chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1
SV=1
Length = 287

Score = 72.4 bits (176), Expect = 2e-12
Identities = 57/186 (30%), Positives = 75/186 (40%), Gaps = 58/186 (31%)
Frame = +3

Query: 246 SNGSRLVC---MATKKVSSRPS----SGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDP 404
SN SR TKK S + + S + W PG + PE+LDGSL GDYGFDP
Sbjct: 24 SNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPGAKS------PEYLDGSLVGDYGFDP 77

Query: 405 LGLGK--------------------------------DPAA-----------LKWYREAE 455
GLGK DP + L+ +RE E
Sbjct: 78 FGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECE 137

Query: 456 IIHGRWAMAAVVGIFVGQAWSGVPWFEAG--------AQPGAVAPFSFXXXXXXXXXXMG 611
+IHGRWAM A +G + +GV W +AG + G PFS +G
Sbjct: 138 LIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIG 197

Query: 612 WVESKR 629
++E +R
Sbjct: 198 YIEFQR 203



Score = 38.1 bits (87), Expect = 0.042
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +3

Query: 381 PGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGIFVGQAWSG 521
PG FDPLGL DP + AEI H R AM +G V A +G
Sbjct: 215 PGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATG 261


tr_hit_id A9RU32
Definition tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 132
Score (bit) 226.0
E-value 1.0e-57
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959124|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_N10, 5'
(663 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella paten... 226 1e-57
tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromos... 217 5e-55
tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24 OS=P... 216 1e-54
tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24 ... 216 1e-54
tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Popul... 213 6e-54
tr|B3VV93|B3VV93_POPTN Chloroplast light-harvesting complex II p... 213 8e-54
tr|B3VV83|B3VV83_POPTN Chloroplast light-harvesting complex II p... 213 8e-54
tr|B3VV74|B3VV74_POPTN Chloroplast light-harvesting complex II p... 213 8e-54
tr|A9PK00|A9PK00_POPJC Putative uncharacterized protein OS=Popul... 213 8e-54
tr|A9PGD4|A9PGD4_POPTR Putative uncharacterized protein OS=Popul... 213 8e-54
tr|B3VV84|B3VV84_POPTN Chloroplast light-harvesting complex II p... 211 2e-53
tr|Q9XF90|Q9XF90_ARATH Lhcb6 protein OS=Arabidopsis thaliana GN=... 211 3e-53
tr|Q9LMQ2|Q9LMQ2_ARATH F7H2.16 protein (Chlorophyll A-B binding ... 211 3e-53
tr|B3VV80|B3VV80_POPTN Chloroplast light-harvesting complex II p... 211 4e-53
tr|Q6DV17|Q6DV17_BRARP Lhcb6 protein (Fragment) OS=Brassica rapa... 210 7e-53
tr|B3VV72|B3VV72_POPTN Chloroplast light-harvesting complex II p... 209 9e-53
tr|B3VV73|B3VV73_POPTN Chloroplast light-harvesting complex II p... 208 2e-52
tr|B3VV82|B3VV82_POPTN Chloroplast light-harvesting complex II p... 206 1e-51
tr|B8PYF9|B8PYF9_9POAL Chloroplast a/b binding protein cab-PhE11... 200 6e-50
tr|B4FXB0|B4FXB0_MAIZE Chlorophyll a-b binding protein CP24 OS=Z... 197 5e-49
tr|B6T037|B6T037_MAIZE Chlorophyll a-b binding protein CP24 OS=Z... 197 6e-49
tr|Q7XV11|Q7XV11_ORYSJ Os04g0457000 protein OS=Oryza sativa subs... 196 1e-48
tr|A2XU61|A2XU61_ORYSI Putative uncharacterized protein OS=Oryza... 196 1e-48
tr|Q01JQ3|Q01JQ3_ORYSA H0523F07.10 protein OS=Oryza sativa GN=H0... 194 4e-48
tr|Q41748|Q41748_MAIZE Chlorophyll a/b-binding apoprotein CP24 O... 193 7e-48
tr|A3AUG3|A3AUG3_ORYSJ Putative uncharacterized protein OS=Oryza... 132 2e-29
tr|Q5BMR6|Q5BMR6_FRAAN Chloroplast chlorophyll a/b-binding prote... 129 2e-28
tr|A9PJQ2|A9PJQ2_POPJC Putative uncharacterized protein OS=Popul... 108 4e-22
tr|A7PDT5|A7PDT5_VITVI Chromosome chr11 scaffold_13, whole genom... 107 5e-22
tr|A5BBT6|A5BBT6_VITVI Putative uncharacterized protein OS=Vitis... 107 5e-22

>tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_119427 PE=4 SV=1
Length = 219

Score = 226 bits (575), Expect = 1e-57
Identities = 102/132 (77%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Frame = +3

Query: 270 MATKKVSSRPSSG-KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYR 446
MATKKVS+RP++G KKSW+P V+GGGNL DPEWLDGSLPGDYGFDPLGLG+DPAALKWYR
Sbjct: 1 MATKKVSARPAAGGKKSWIPAVKGGGNLTDPEWLDGSLPGDYGFDPLGLGRDPAALKWYR 60

Query: 447 EAEIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESK 626
EAE+IHGRWAMAAVVGIFVGQ WSGVPWFEAGA P A+APFSF MGWVE+K
Sbjct: 61 EAELIHGRWAMAAVVGIFVGQGWSGVPWFEAGADPAALAPFSFGSLLGTQLLLMGWVETK 120

Query: 627 RWVDFFDTGSQS 662
RW+DF + G+QS
Sbjct: 121 RWIDFLNPGTQS 132


>tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromosome
chr12 scaffold_238, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00009554001 PE=4 SV=1
Length = 257

Score = 217 bits (553), Expect = 5e-55
Identities = 99/118 (83%), Positives = 103/118 (87%)
Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
KKSWLPGV+ GGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53 KKSWLPGVKAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
VGIFVGQAWSG+PWFEAGA PGAVAPFSF MGWVESKRWVDFF+ SQS
Sbjct: 113 VGIFVGQAWSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQS 170


>tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24
OS=Phaseolus aureus GN=CipCp24 PE=2 SV=2
Length = 258

Score = 216 bits (549), Expect = 1e-54
Identities = 97/118 (82%), Positives = 103/118 (87%)
Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
KKSW+PGVRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 54 KKSWIPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 113

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
+GIFVGQAWSGVPWFEAGA P A+APFSF MGWVESKRWVDFF+ SQS
Sbjct: 114 LGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQS 171


>tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24
OS=Nicotiana tabacum GN=Lhcb6 PE=2 SV=1
Length = 257

Score = 216 bits (549), Expect = 1e-54
Identities = 99/138 (71%), Positives = 114/138 (82%), Gaps = 2/138 (1%)
Frame = +3

Query: 255 SRLVCMATKK--VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 428
+R+ +AT K + + ++ KKSW+P V+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPA
Sbjct: 33 ARIGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPA 92

Query: 429 ALKWYREAEIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXM 608
LKWYREAE+IHGRWAMAAV+GIFVGQAWSG+PWFEAGA PGA+APFSF M
Sbjct: 93 FLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLM 152

Query: 609 GWVESKRWVDFFDTGSQS 662
GWVESKRWVDFF+ SQS
Sbjct: 153 GWVESKRWVDFFNPESQS 170


>tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 257

Score = 213 bits (543), Expect = 6e-54
Identities = 95/118 (80%), Positives = 103/118 (87%)
Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
KKSW+P V+GGG+LVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53 KKSWIPAVKGGGSLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
+GIFVGQAWSG+PWFEAGA PGA+APFSF MGWVESKRWVDFF+ SQS
Sbjct: 113 LGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQS 170


>tr|B3VV93|B3VV93_POPTN Chloroplast light-harvesting complex II
protein (Fragment) OS=Populus tremula PE=4 SV=1
Length = 174

Score = 213 bits (542), Expect = 8e-54
Identities = 95/118 (80%), Positives = 102/118 (86%)
Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 19 KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
VGIFVGQAWSG+PWFEAGA PGA+APFSF MGWVESKRWVDFF+ SQS
Sbjct: 79 VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 136


>tr|B3VV83|B3VV83_POPTN Chloroplast light-harvesting complex II
protein (Fragment) OS=Populus tremula PE=4 SV=1
Length = 174

Score = 213 bits (542), Expect = 8e-54
Identities = 95/118 (80%), Positives = 102/118 (86%)
Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 19 KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
VGIFVGQAWSG+PWFEAGA PGA+APFSF MGWVESKRWVDFF+ SQS
Sbjct: 79 VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 136


>tr|B3VV74|B3VV74_POPTN Chloroplast light-harvesting complex II
protein (Fragment) OS=Populus tremula PE=4 SV=1
Length = 174

Score = 213 bits (542), Expect = 8e-54
Identities = 95/118 (80%), Positives = 102/118 (86%)
Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 19 KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
VGIFVGQAWSG+PWFEAGA PGA+APFSF MGWVESKRWVDFF+ SQS
Sbjct: 79 VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 136


>tr|A9PK00|A9PK00_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 257

Score = 213 bits (542), Expect = 8e-54
Identities = 95/118 (80%), Positives = 102/118 (86%)
Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53 KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
VGIFVGQAWSG+PWFEAGA PGA+APFSF MGWVESKRWVDFF+ SQS
Sbjct: 113 VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 170


>tr|A9PGD4|A9PGD4_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 257

Score = 213 bits (542), Expect = 8e-54
Identities = 95/118 (80%), Positives = 102/118 (86%)
Frame = +3

Query: 309 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 488
KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53 KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 489 VGIFVGQAWSGVPWFEAGAQPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFDTGSQS 662
VGIFVGQAWSG+PWFEAGA PGA+APFSF MGWVESKRWVDFF+ SQS
Sbjct: 113 VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQS 170