DK959132 |
Clone id |
TST39A01NGRL0003_N18 |
Library |
TST39 |
Length |
666 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_N18. 5' end sequence. |
Accession |
DK959132 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2130Contig1 |
Sequence |
ACCTATCCAAGCAATGGACCAGCGGAGTATCTTGAAGATAAGAAAGAGGCTTCAAAGAAA GATGTGTCTAGTGGAATAAAAGAGGTTGTTCCAGCTGAGCCACCATGCAGTCAGCTCATT CCTGTATGTTCTATTGATGCAGATTACACTTCAAGGGATGCTGGTGCCAAGGATATCACC TTTGGGAGGGGTCAAGCCAGAAGCCTCAGTCACGAGCCTGGAACTTTTTCAGATACCTCA AAATTGGATGTTAAGGAGCAAACGGTTCTTGAAACCCTTTTGAGGGATGAACCCACTGGT TACAGTTCAGGGGGAGGTTCTGAACCAAGTCGGAGCTATAGAGTGGAAAAGTCTGGATGC GAGGGAGTTATTGAAAGGTGTGGACATGAAGAATCAGGTCAGTCTGAGGATACCAAAAGT ACTGATGCGGAGTCTGACTTCAGTCAAAGTGATGAGTATGATGAAGGGGATTCAGCTTCT AGCGAGAGTCATGAGTGTGATGATGAAGAATGTAACTGTAATGGGCTTTCCCCTGGCATG ATTGCCCATCCTAGTAAAGGAGTCGGTTGTACTGAGCAAGTGCCATCCGTTTTATGTGAT GCAGAAGGGAACATTTGGCATATTGGTAAGAGAGCAGAACAGGCTAGAGGGAAGGGCATG CTCACG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9QAB7 |
Definition |
sp|Q9QAB7|HBSAG_HBVB3 Large envelope protein OS=Hepatitis B virus genotype B2 (isolate Vietnam/9873/1997) |
Align length |
38 |
Score (bit) |
34.7 |
E-value |
0.47 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6M3J1 |
Definition |
tr|B6M3J1|B6M3J1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae |
Align length |
107 |
Score (bit) |
44.7 |
E-value |
0.005 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959132|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_N18, 5' (666 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6M3J1|B6M3J1_BRAFL Putative uncharacterized protein OS=Branc... 45 0.005 tr|Q7ZUQ5|Q7ZUQ5_DANRE Zgc:110391 protein (Fragment) OS=Danio re... 41 0.077 tr|Q499A1|Q499A1_DANRE Zgc:110391 OS=Danio rerio GN=zgc:110391 P... 41 0.077 tr|Q66I48|Q66I48_DANRE Zgc:110391 protein (Fragment) OS=Danio re... 40 0.10 tr|B6NNX1|B6NNX1_BRAFL Putative uncharacterized protein OS=Branc... 40 0.10 tr|Q4S5P6|Q4S5P6_TETNG Chromosome 9 SCAF14729, whole genome shot... 37 0.85 tr|Q0D6J9|Q0D6J9_ORYSJ Os07g0471900 protein OS=Oryza sativa subs... 37 0.85 tr|B8B5Y5|B8B5Y5_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.85 tr|A6GFP0|A6GFP0_9DELT Putative uncharacterized protein OS=Plesi... 37 1.5 tr|Q9WHR8|Q9WHR8_HBV Surface antigen OS=Hepatitis B virus PE=4 SV=1 36 1.9 tr|Q8L4Y9|Q8L4Y9_ORYSJ BHLH transcription factor-like protein OS... 36 2.5 tr|A3BJM2|A3BJM2_ORYSJ Putative uncharacterized protein OS=Oryza... 36 2.5 tr|Q6CF51|Q6CF51_YARLI YALI0B10241p OS=Yarrowia lipolytica GN=YA... 35 3.2 tr|A2T2F5|A2T2F5_HBV Pre-S2 protein (Fragment) OS=Hepatitis B vi... 35 4.2 tr|A2T2E8|A2T2E8_HBV Pre-S2 protein (Fragment) OS=Hepatitis B vi... 35 4.2 tr|A2T2E5|A2T2E5_HBV Pre-S2 protein (Fragment) OS=Hepatitis B vi... 35 4.2 tr|A4I1C6|A4I1C6_LEIIN Putative uncharacterized protein OS=Leish... 35 4.2 tr|Q6FVB4|Q6FVB4_CANGA Strain CBS138 chromosome A complete seque... 35 4.2 tr|B5U8E1|B5U8E1_HBV Large surface protein OS=Hepatitis B virus ... 35 5.5 tr|A8D6M9|A8D6M9_HBV S protein OS=Hepatitis B virus GN=S PE=4 SV=1 35 5.5 tr|A8D2B1|A8D2B1_HBV S protein OS=Hepatitis B virus GN=S PE=4 SV=1 35 5.5 tr|A8D2A8|A8D2A8_HBV S protein OS=Hepatitis B virus GN=S PE=4 SV=1 35 5.5 tr|A8D297|A8D297_HBV S protein OS=Hepatitis B virus GN=S PE=4 SV=1 35 5.5 tr|Q29MD5|Q29MD5_DROPS GA17731 OS=Drosophila pseudoobscura pseud... 35 5.5 tr|B4G9E7|B4G9E7_DROPE GL19469 OS=Drosophila persimilis GN=GL194... 35 5.5 tr|A1K6F1|A1K6F1_AZOSB Putative uncharacterized protein OS=Azoar... 35 5.5 tr|Q4Q518|Q4Q518_LEIMA Putative uncharacterized protein OS=Leish... 35 5.5 tr|Q7TDS3|Q7TDS3_HBV Large envelope protein OS=Hepatitis B virus... 34 7.1 tr|Q7T4T9|Q7T4T9_HBV Large envelope protein OS=Hepatitis B virus... 34 7.1 tr|Q6JR02|Q6JR02_HBV S protein (Fragment) OS=Hepatitis B virus P... 34 7.1
>tr|B6M3J1|B6M3J1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_77787 PE=4 SV=1 Length = 3219
Score = 44.7 bits (104), Expect = 0.005 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 6/107 (5%) Frame = +1
Query: 25 EYLEDKKEASKKDVSSGIKEVVPAEPPCSQLIPVCSIDADYTSRDAGAKDITFGRGQARS 204 E +D +E K VS + E E P SQ S+D+ +RD KD T + S Sbjct: 1137 EIAKDAEEGDKNVVSKTVTE----ENPLSQEEVTVSVDSAVVNRDEQGKDETQSDNKEDS 1192
Query: 205 LSHEPGTFSDTSKLDVKEQTVLETLLRD------EPTGYSSGGGSEP 327 EPG+ +T K++V E + + L D E T + G +EP Sbjct: 1193 EQREPGSNVETDKVEVHEDEISDKTLEDVSSDESEQTKQHTEGSTEP 1239
>tr|Q7ZUQ5|Q7ZUQ5_DANRE Zgc:110391 protein (Fragment) OS=Danio rerio GN=zgc:110391 PE=2 SV=1 Length = 677
Score = 40.8 bits (94), Expect = 0.077 Identities = 32/142 (22%), Positives = 57/142 (40%) Frame = +1
Query: 40 KKEASKKDVSSGIKEVVPAEPPCSQLIPVCSIDADYTSRDAGAKDITFGRGQARSLSHEP 219 K + + + + + V AEP S+ P D + G KD+ RG+ R L+ Sbjct: 426 KSVTKESENNDEMMQQVTAEPGTSEDKPAADADESDAESEKGRKDVCSPRGRRRCLT--- 482
Query: 220 GTFSDTSKLDVKEQTVLETLLRDEPTGYSSGGGSEPSRSYRVEKSGCEGVIERCGHEESG 399 T +K++ + E +++ G EP EKS E +R Sbjct: 483 -TPVKVEMEPLKQEKIKEEKKKEDTQSVGENSGEEPK-----EKSDGEIPGKRRSRRHEE 536
Query: 400 QSEDTKSTDAESDFSQSDEYDE 465 +D++ D ++D + D+ DE Sbjct: 537 SDKDSEEDDDDNDDEEQDDDDE 558
>tr|Q499A1|Q499A1_DANRE Zgc:110391 OS=Danio rerio GN=zgc:110391 PE=1 SV=1 Length = 1196
Score = 40.8 bits (94), Expect = 0.077 Identities = 32/142 (22%), Positives = 57/142 (40%) Frame = +1
Query: 40 KKEASKKDVSSGIKEVVPAEPPCSQLIPVCSIDADYTSRDAGAKDITFGRGQARSLSHEP 219 K + + + + + V AEP S+ P D + G KD+ RG+ R L+ Sbjct: 426 KSVTKESENNDEMMQQVTAEPGTSEDKPAADADESDAESEKGRKDVCSPRGRRRCLT--- 482
Query: 220 GTFSDTSKLDVKEQTVLETLLRDEPTGYSSGGGSEPSRSYRVEKSGCEGVIERCGHEESG 399 T +K++ + E +++ G EP EKS E +R Sbjct: 483 -TPVKVEMEPLKQEKIKEEKKKEDTQSVGENSGEEPK-----EKSDGEIPGKRRSRRHEE 536
Query: 400 QSEDTKSTDAESDFSQSDEYDE 465 +D++ D ++D + D+ DE Sbjct: 537 SDKDSEEDDDDNDDEEQDDDDE 558
>tr|Q66I48|Q66I48_DANRE Zgc:110391 protein (Fragment) OS=Danio rerio GN=zgc:110391 PE=2 SV=1 Length = 663
Score = 40.4 bits (93), Expect = 0.10 Identities = 34/141 (24%), Positives = 57/141 (40%) Frame = +1
Query: 43 KEASKKDVSSGIKEVVPAEPPCSQLIPVCSIDADYTSRDAGAKDITFGRGQARSLSHEPG 222 KE+ D + + V AEP S+ P D + G KD+ RG+ R L+ Sbjct: 430 KESENNDE---MMQQVTAEPGTSEDKPAADADESDAESEKGRKDVCSPRGRRRCLT---- 482
Query: 223 TFSDTSKLDVKEQTVLETLLRDEPTGYSSGGGSEPSRSYRVEKSGCEGVIERCGHEESGQ 402 T +K++ + E +++ G EP EKS E +R Sbjct: 483 TPVKVEMEPLKQEKIKEEKKKEDTQSVGENSGEEPK-----EKSDGEIPGKRRSRRHEES 537
Query: 403 SEDTKSTDAESDFSQSDEYDE 465 +D++ D ++D + D+ DE Sbjct: 538 DKDSEEDDDDNDDEEQDDDDE 558
>tr|B6NNX1|B6NNX1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_97351 PE=4 SV=1 Length = 4023
Score = 40.4 bits (93), Expect = 0.10 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 4/90 (4%) Frame = +1
Query: 31 LEDKKEASKKDVSSGIKEVVPA----EPPCSQLIPVCSIDADYTSRDAGAKDITFGRGQA 198 LE+++ A KD G K +VP E P SQ S+DA +RD KD + + Sbjct: 1969 LEEQEIA--KDAEEGDKNMVPKTVTEENPLSQEEGAVSVDAAVVNRDEQRKDESQNYNKE 2026
Query: 199 RSLSHEPGTFSDTSKLDVKEQTVLETLLRD 288 S EPG +T K+ V E + + L D Sbjct: 2027 DSEQREPGRNVETDKVQVHEDEISDKTLED 2056
>tr|Q4S5P6|Q4S5P6_TETNG Chromosome 9 SCAF14729, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00023641001 PE=4 SV=1 Length = 466
Score = 37.4 bits (85), Expect = 0.85 Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 4/132 (3%) Frame = +1
Query: 82 EVVPA--EPPCSQLIPVCSIDADYTSRDAGAKDITFGRGQARSLSH--EPGTFSDTSKLD 249 EVVP P CS L+ + D + A K G S H PG S S D Sbjct: 314 EVVPLLMAPFCSLLLQEYNPDQ---ANAAPKKKKPDGAPPTPSTDHVAPPGDRSSVSSYD 370
Query: 250 VKEQTVLETLLRDEPTGYSSGGGSEPSRSYRVEKSGCEGVIERCGHEESGQSEDTKSTDA 429 + E ++PT YS S+ + S GV R ++ GQ +D S A Sbjct: 371 KNQAYSTEWSDDEQPTAYSGNENGGNGNSFEDDSSTGRGVRVRALYDYEGQEQDELSFKA 430
Query: 430 ESDFSQSDEYDE 465 + +++++ DE Sbjct: 431 GDELTKTEDEDE 442
>tr|Q0D6J9|Q0D6J9_ORYSJ Os07g0471900 protein OS=Oryza sativa subsp. japonica GN=Os07g0471900 PE=4 SV=1 Length = 437
Score = 37.4 bits (85), Expect = 0.85 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Frame = +1
Query: 130 SIDADYTSRDAGAKD-----ITFGRGQARSLSHEPGTFSD--TSKLDVKEQTVLETLLRD 288 ++D + S +AGA I+FG G P + + TS D K+Q + + Sbjct: 220 TMDVPWGSSNAGAARSLSDLISFGGGAMDKPPPPPPSSAPARTSSADYKKQQGQQEISSP 279
Query: 289 EPTGYSSGGGSEPSRSYRVEKSGCEGVIERCGHEESGQSEDTKS 420 T S GGG E + E +G EG ++ HE + + KS Sbjct: 280 VKTSSSGGGGKEGKKKRSEEAAGSEGSTKKSKHEATSPTSSLKS 323
>tr|B8B5Y5|B8B5Y5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25950 PE=4 SV=1 Length = 562
Score = 37.4 bits (85), Expect = 0.85 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Frame = +1
Query: 130 SIDADYTSRDAGAKD-----ITFGRGQARSLSHEPGTFSD--TSKLDVKEQTVLETLLRD 288 ++D + S +AGA I+FG G P + + TS D K+Q + + Sbjct: 352 TMDVPWGSSNAGAARSLSDLISFGGGAMDKPPPPPPSSAPARTSSADYKKQQGQQEISSP 411
Query: 289 EPTGYSSGGGSEPSRSYRVEKSGCEGVIERCGHEESGQSEDTKS 420 T S GGG E + E +G EG ++ HE + + KS Sbjct: 412 VKTSSSGGGGKEGKKKRSEEAAGSEGSTKKSKHEATSPTSSLKS 455
>tr|A6GFP0|A6GFP0_9DELT Putative uncharacterized protein OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_25976 PE=4 SV=1 Length = 232
Score = 36.6 bits (83), Expect = 1.5 Identities = 29/89 (32%), Positives = 39/89 (43%) Frame = +1
Query: 76 IKEVVPAEPPCSQLIPVCSIDADYTSRDAGAKDITFGRGQARSLSHEPGTFSDTSKLDVK 255 + E++ A PP S+ S+DAD TS+ A D RG+ EPG + S + Sbjct: 96 LAELLAAGPPASEPADALSVDADGTSKAAADTD----RGEV-----EPGVATPVSASPLA 146
Query: 256 EQTVLETLLRDEPTGYSSGGGSEPSRSYR 342 + L D P G GG S P S R Sbjct: 147 SSSEGARLRLDRPAG--KGGSSTPPSSAR 173
>tr|Q9WHR8|Q9WHR8_HBV Surface antigen OS=Hepatitis B virus PE=4 SV=1 Length = 226
Score = 36.2 bits (82), Expect = 1.9 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -2
Query: 647 LACSALLPICQMFPSASHKTDGTCSVQPTPLLGWAIMP 534 L C +LP+C + P +S + GTC TP G ++ P Sbjct: 98 LDCQGMLPVCPLIPGSSTTSTGTCRTCTTPAQGTSMYP 135
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