DK959137 |
Clone id |
TST39A01NGRL0003_N24 |
Library |
TST39 |
Length |
685 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_N24. 5' end sequence. |
Accession |
DK959137 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL291Contig1 |
Sequence |
GCAATGATTCGTGGCATGGCACGATTGATGGGGGTCGCAGCAGCAGGGACTGCTGCAATG GCTCCATCATCTTCTCCAGCTTTCTGCCATGCTTCGACGCAAGAACATTCAGCCAACATG CCATCTGCGCTACATCTGTCTCAGAAGGAGGCTTCTTCTGGAGGTGTCCCTTCTGACATG CGATTCCTCAATGCAGATGACTTGGAATATTCTTCAGATGAGGATTGGGGCAAACTCTCT TACAATCGCCTTGTATTTTCCACTGCTCCCTCGGAAGAGGAAGTTGAAGAGGCCACCAAA GAGCTACATGCTGCTCTTCATCTCTCCATTCCTGCCTCTAGTTCTGTGGAAAAAGAGAGC CCAACCATGCCTGTGGTGGAGAATGAGGAGAAAGAATTTGTTCCGGCCATTGTGAATCAA GAGAGGGCAACAGAGGAACAGCTTCCATCTTTGTCTGCTGGCCTGGGTCTGCTTGCTGCA GGAAGCAGCTCTGTTTATCAAGCATTTCATTTATTGCAGACTAACTCCAAGGTCCAGGAT GCAGTCAAATCGCTTGCTCGTGATCCGGCAATCTGGAAAGCAGTTTTAAGCAACGAAAAG GTTTTGGAGCTCACCCAAACTTTACAGGAGGGACATGAAACTGCTGCTTCTGTTATCTTC AAGGAAGAGAATGGAGAAACTTCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5TGJ6 |
Definition |
sp|Q5TGJ6|HDGL1_HUMAN Hepatoma-derived growth factor-like protein 1 OS=Homo sapiens |
Align length |
59 |
Score (bit) |
35.0 |
E-value |
0.37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NLD3 |
Definition |
tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
154 |
Score (bit) |
68.9 |
E-value |
3.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959137|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_N24, 5' (685 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea... 69 3e-10 tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella paten... 68 6e-10 tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromos... 66 2e-09 tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea m... 65 4e-09 tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea... 63 2e-08 tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella paten... 58 6e-07 tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subs... 57 8e-07 tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza... 57 8e-07 tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 53 2e-05 tr|A9NUF8|A9NUF8_PICSI Putative uncharacterized protein OS=Picea... 52 4e-05 tr|A7P136|A7P136_VITVI Chromosome chr19 scaffold_4, whole genome... 50 1e-04 tr|A7Q5B8|A7Q5B8_VITVI Chromosome undetermined scaffold_52, whol... 50 1e-04 tr|Q9FKH0|Q9FKH0_ARATH Genomic DNA, chromosome 5, TAC clone:K11J... 49 3e-04 tr|Q01JC7|Q01JC7_ORYSA OSIGBa0122F23.3 protein OS=Oryza sativa G... 49 3e-04 tr|B4FKH1|B4FKH1_MAIZE Putative uncharacterized protein OS=Zea m... 49 3e-04 tr|A2XW72|A2XW72_ORYSI Putative uncharacterized protein OS=Oryza... 49 3e-04 tr|Q7XU30|Q7XU30_ORYSJ Os04g0550700 protein OS=Oryza sativa subs... 49 4e-04 tr|A6N1C1|A6N1C1_ORYSI Putative uncharacterized protein (Fragmen... 49 4e-04 tr|A3BQ82|A3BQ82_ORYSJ Putative uncharacterized protein OS=Oryza... 49 4e-04 tr|A3AW63|A3AW63_ORYSJ Putative uncharacterized protein OS=Oryza... 49 4e-04 tr|A5BI54|A5BI54_VITVI Putative uncharacterized protein OS=Vitis... 47 9e-04 tr|A7PKF7|A7PKF7_VITVI Chromosome chr15 scaffold_19, whole genom... 46 0.002 tr|Q949B5|Q949B5_ORYSA Putative uncharacterized protein W1110ERI... 45 0.004 tr|Q6H689|Q6H689_ORYSJ Os02g0657700 protein OS=Oryza sativa subs... 45 0.004 tr|B8AG50|B8AG50_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.004 tr|B6TL94|B6TL94_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.004 tr|B4G1S6|B4G1S6_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.004 tr|B4FQT4|B4FQT4_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.004 tr|A3A9S8|A3A9S8_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.004 tr|Q10QD3|Q10QD3_ORYSJ Os03g0201000 protein OS=Oryza sativa subs... 44 0.013
>tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 68.9 bits (167), Expect = 3e-10 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 9/154 (5%) Frame = +1
Query: 196 DDLEYSSDEDWGKLSYN-----RLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKE 357 DD E++ DE+ + Y+ RL+F + P+++EV+E + AL I P S + + Sbjct: 75 DDWEFTGDEEGFQRHYDDDHHDRLIFGSVPTQKEVQEVVSDFQDALTQGIVPVSGNFNDK 134
Query: 358 ---SPTMPVVENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNS 528 S + V + + +VN ++ E V +AF+LLQ+N Sbjct: 135 TTLSSSSSVYKKSGNKSCGTLVNLDQMERES--HEDNYRIVQKAGHNNVCEAFNLLQSNP 192
Query: 529 KVQDAVKSLARDPAIWKAVLSNEKVLELTQTLQE 630 VQ+ V SLA D +W+A+L NEKV E Q+LQ+ Sbjct: 193 AVQEMVISLASDKTVWEALLKNEKVTEFRQSLQK 226
>tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_229919 PE=4 SV=1 Length = 375
Score = 67.8 bits (164), Expect = 6e-10 Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%) Frame = +1
Query: 85 CHASTQEHSANMPSALHLS---QKEASSGGVPSDMRF---LNADDLEYSSDEDWGKLSYN 246 C T S P++ ++ E S G +D F L+ +D E++ DED+ Sbjct: 23 CRMCTTTPSLKAPTSARITCDCPSEVHSPGSTTDSGFKQYLDIEDWEFAGDEDY------ 76
Query: 247 RLVFSTAPSEEEVEEATKELHAALHLSI---------------PASSSVEKESPTM--PV 375 LVF T P++ EVEEAT +L AL + + SS EK+ P Sbjct: 77 -LVFGTLPTQGEVEEATSDLQHALQIGLFTNRSSNPLESSLARAGSSGKEKDGAVSRDPK 135
Query: 376 VENEEKEF--VPAIVNQERATEEQLPXXXXXXXXXXXXXXX-VYQAFHLLQTNSKVQDAV 546 V+ E+ + V A+ + L + +AFH Q N ++Q V Sbjct: 136 VDGEDAGYHVVDAVADDWLEPSVALASSSKGKEVAGSGGKSAMLEAFHQFQHNPQIQQMV 195
Query: 547 KSLARDPAIWKAVLSNEKVLELTQTLQEGHE 639 SLA D +W AVL+N+++ E + L+E E Sbjct: 196 VSLATDKGVWDAVLANDQIKEFRKKLREAPE 226
>tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRB17 (AT5g54540/MRB17_4) OS=Arabidopsis thaliana GN=At5g54540 PE=2 SV=1 Length = 297
Score = 65.9 bits (159), Expect = 2e-09 Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 3/201 (1%) Frame = +1
Query: 91 ASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFSTAP 270 AS++ SA++ SA+H S +E G + M+ DD E++ +E R+VFS P Sbjct: 44 ASSKPVSASITSAVHPSVEE--DGMI---MQRPVWDDWEFAEEEP-----IPRVVFSKPP 93
Query: 271 SEEEVEEATKELHAALHL---SIPASSSVEKESPTMPVVENEEKEFVPAIVNQERATEEQ 441 S EE +EAT++L A++L S P SS+ + S V F + + RA E Sbjct: 94 SLEEAKEATEDLKEAINLVYMSSPKSSAAMEGSNDGGSVSKMLSGFQSS---ENRAVESA 150
Query: 442 LPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVLELTQT 621 +P QAF L N+ Q V S+A DP +W AV+ N+ +++ QT Sbjct: 151 VPQV-------------ALQAFAFLSENTAAQTVVASIASDPKVWDAVMENKDLMKFLQT 197
Query: 622 LQEGHETAASVIFKEENGETS 684 ++TA S + +N + S Sbjct: 198 ----NKTAVSSQVESDNDDQS 214
>tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 315
Score = 65.1 bits (157), Expect = 4e-09 Identities = 53/141 (37%), Positives = 70/141 (49%) Frame = +1
Query: 247 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 426 RLVF+ PS EE EEAT EL A+ + S VE VV+ + KEF + Sbjct: 101 RLVFAP-PSREEAEEATTELRDAIGRAYFNESPVE-------VVKEQNKEF------NKL 146
Query: 427 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVL 606 AT+ +P V QAF LL+++++ Q V SLA D +W AVL NEKV+ Sbjct: 147 ATDAIIPSMPGH----------VVQAFTLLKSSTEAQSVVASLASDRNVWDAVLKNEKVM 196
Query: 607 ELTQTLQEGHETAASVIFKEE 669 E +T H+T F EE Sbjct: 197 EFYKT----HQTTPVQTFPEE 213
>tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 63.2 bits (152), Expect = 2e-08 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 11/154 (7%) Frame = +1
Query: 205 EYSSDEDWGKLSY-NRLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKESPTMPVV 378 E ++++++G + +R+VF AP++EEVEEA +L +L SI S S ES ++P Sbjct: 86 EETNNDNFGHHPFRDRVVFGAAPTKEEVEEAVSDLQGSLAQSILYPSGSQGYESSSLPTA 145
Query: 379 ENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQ---------AFHLLQTNSK 531 + + + +E V Q AF LLQ N Sbjct: 146 VQKNGGSIEVSQCSDSESESSKSVVDWIEPELYLYNHEVVQQLRQNDVLDAFRLLQRNHT 205
Query: 532 VQDAVKSLARDPAIWKAVLSNEKVLELTQTLQEG 633 V++ V SL D AIW A+L NEKV+E + L +G Sbjct: 206 VREMVISLVSDKAIWDALLKNEKVVEFRELLHKG 239
>tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164415 PE=4 SV=1 Length = 352
Score = 57.8 bits (138), Expect = 6e-07 Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 43/219 (19%) Frame = +1
Query: 82 FCHASTQEHSANMPSALHLSQKEASSGGVPSD--MRFLNADDLEYSSDEDW---GKLSYN 246 +CH + +++ P + S K + GG+ + + ++ ++ EDW G + Sbjct: 29 YCHCAPPPNAS--PRSRGASCKCKAVGGIHAHPGLSAVSYGPRQFWDGEDWEIAGDEERD 86
Query: 247 RLVFSTAPSEEEVEEATKELHAALHLSI-------------PASSSVEK----------- 354 VF + P+ EEVEEA+ +L AL L P SSS Sbjct: 87 HYVFGSLPTVEEVEEASSDLQNALRLGFFTPPPPKSEALPKPESSSSRSHPQSPRSSLGP 146
Query: 355 ------ESPTMPVVENEEKEF--------VPAIVNQERATEEQLPXXXXXXXXXXXXXXX 492 E T+ V E+E V +V + E L Sbjct: 147 VLVEATEMSTVTTVGEVEEEVTSNLSPLPVEPLVESKECIESPLYEVATSPKHSGAPSSA 206
Query: 493 VYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVLE 609 + +AF+ Q N +VQ V SLA D AIW AVLSNEK+ E Sbjct: 207 MLEAFYQFQHNPQVQGMVVSLATDKAIWDAVLSNEKIKE 245
>tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subsp. japonica GN=P0455A11.10 PE=4 SV=1 Length = 300
Score = 57.4 bits (137), Expect = 8e-07 Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 5/151 (3%) Frame = +1
Query: 247 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 426 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 104 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 149
Query: 427 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVL 606 + +P V QAF LL+++ + Q V SLA D +W AVL NEKV+ Sbjct: 150 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVWDAVLKNEKVM 199
Query: 607 ELTQTLQEG-----HETAASVIFKEENGETS 684 E +T Q+ E ASV+ E+ + S Sbjct: 200 EFYKTHQQSLVYTFPEGTASVVSPEKLADAS 230
>tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28043 PE=4 SV=1 Length = 240
Score = 57.4 bits (137), Expect = 8e-07 Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 5/151 (3%) Frame = +1
Query: 247 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 426 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 44 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 89
Query: 427 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVL 606 + +P V QAF LL+++ + Q V SLA D +W AVL NEKV+ Sbjct: 90 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVWDAVLKNEKVM 139
Query: 607 ELTQTLQEG-----HETAASVIFKEENGETS 684 E +T Q+ E ASV+ E+ + S Sbjct: 140 EFYKTHQQSLVYTFPEGTASVVSPEKLADAS 170
>tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g10390 PE=4 SV=1 Length = 288
Score = 52.8 bits (125), Expect = 2e-05 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 4/142 (2%) Frame = +1
Query: 208 YSSDEDWGKLSYNRLVFSTAPSEEEVEEATKELHAALHLSIPAS----SSVEKESPTMPV 375 Y++ +DW + +R VF P+ EE AT +L + + A S + + PT + Sbjct: 52 YAAIDDW--VIPDREVFGPVPTHEEAMAATLDLKESFQFAKSAQLEPLPSGDLDVPTKGL 109
Query: 376 VENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSL 555 V +E + + E ++ V QAF +LQ + + Q+ V SL Sbjct: 110 VHSESSQGLIHSKTSEHEDNHEISLVSSGAPGR------VVQAFTMLQDSPEAQEVVASL 163
Query: 556 ARDPAIWKAVLSNEKVLELTQT 621 A D +W AV+ NEKV++ +T Sbjct: 164 ASDQNVWNAVMRNEKVMKFYKT 185
>tr|A9NUF8|A9NUF8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 454
Score = 52.0 bits (123), Expect = 4e-05 Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = +1
Query: 493 VYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVLELTQTLQEG 633 V +AFHLL+ N VQ V S+A D A+W A+L NEKV E Q+ Q+G Sbjct: 322 VREAFHLLKNNPAVQRMVMSVASDKAVWDALLKNEKVHEFRQSFQQG 368
|