DK959154
Clone id TST39A01NGRL0003_O17
Library
Length 323
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_O17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
ATTGGGTGTATGTGTCCGTGTGTGAGTATGAGCCAGATGCAGAGAAAAAAAAAGAAAATC
ACCAGAGATGACCAAACATGATACGCTTCTTCTCTCTGGAGCTGGAGGCAGAGGAACTTG
GGGAGAACGTGAGGGCTCTCTTGGAAGCGGAAACCGGCTTCTCCCTGGCCTTGCTGCGCC
TGGTCTACAACAGCCGCTATCTGCCCAACTCCTCCACTCTACGATCTGCTGGTGATTGTA
TAAGGTGACCTTCTCATATTGGATACGGTTGCGCCGTCCCCCGCCCCTGCCCCCACTCCT
CCCGGTGACTCTTTGTCTCTTGC
■■Homology search results ■■ -
sp_hit_id Q6ZRV2
Definition sp|Q6ZRV2|FA83H_HUMAN Protein FAM83H OS=Homo sapiens
Align length 42
Score (bit) 35.8
E-value 0.067
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959154|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_O17, 5'
(323 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZRV2|FA83H_HUMAN Protein FAM83H OS=Homo sapiens GN=FAM83H P... 36 0.067
sp|Q7T6X1|YR610_MIMIV Uncharacterized protein R610 OS=Acanthamoe... 33 0.33
sp|Q9CWP9|U572_MOUSE UPF0572 protein OS=Mus musculus PE=2 SV=1 33 0.57
sp|O35889|AFAD_RAT Afadin OS=Rattus norvegicus GN=Mllt4 PE=1 SV=1 33 0.57
sp|Q80ZC9|PS1C2_MOUSE Psoriasis susceptibility 1 candidate gene ... 32 0.74
sp|Q6DRA6|H2B2D_HUMAN Putative histone H2B type 2-D OS=Homo sapi... 32 1.3
sp|Q6DN03|H2B2C_HUMAN Putative histone H2B type 2-C OS=Homo sapi... 32 1.3
sp|Q5DU25|IQEC2_MOUSE IQ motif and SEC7 domain-containing protei... 31 1.7
sp|Q5JU85|IQEC2_HUMAN IQ motif and SEC7 domain-containing protei... 31 1.7
sp|P24328|PERT_BORPA Pertactin OS=Bordetella parapertussis GN=pr... 31 2.2
sp|Q497D6|DDI2_XENTR Protein DDI1 homolog 2 OS=Xenopus tropicali... 31 2.2
sp|Q32P12|CQ053_MOUSE Uncharacterized protein C17orf53 homolog O... 31 2.2
sp|Q2K3Y7|ARAG_RHIEC Arabinose import ATP-binding protein araG O... 28 2.5
sp|A2VDR9|ZN750_BOVIN Protein ZNF750 OS=Bos taurus GN=ZNF750 PE=... 30 2.8
sp|Q8BKZ9|ODPX_MOUSE Pyruvate dehydrogenase protein X component,... 30 2.8
sp|Q96PZ2|F111A_HUMAN Protein FAM111A OS=Homo sapiens GN=FAM111A... 30 2.8
sp|Q69ZW3|EHBP1_MOUSE EH domain-binding protein 1 OS=Mus musculu... 30 3.7
sp|A2ADY9|DDI2_MOUSE Protein DDI1 homolog 2 OS=Mus musculus GN=D... 30 3.7
sp|Q5TDH0|DDI2_HUMAN Protein DDI1 homolog 2 OS=Homo sapiens GN=D... 30 3.7
sp|Q5T230|UTF1_HUMAN Undifferentiated embryonic cell transcripti... 30 4.8
sp|O95072|REC8_HUMAN Meiotic recombination protein REC8 homolog ... 30 4.8
sp|Q7ZYA7|DDI2_XENLA Protein DDI1 homolog 2 OS=Xenopus laevis GN... 30 4.8
sp|P27658|CO8A1_HUMAN Collagen alpha-1(VIII) chain OS=Homo sapie... 30 4.8
sp|P40603|APG_BRANA Anther-specific proline-rich protein APG (Fr... 30 4.8
sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=2 30 4.8
sp|Q9C0B9|ZCHC2_HUMAN Zinc finger CCHC domain-containing protein... 29 6.3
sp|Q6ZRN7|YP029_HUMAN Putative uncharacterized protein FLJ46214 ... 29 6.3
sp|Q9BEA8|TNFL6_PIG Tumor necrosis factor ligand superfamily mem... 29 6.3
sp|P03186|TEGU_EBV Large tegument protein OS=Epstein-Barr virus ... 29 6.3
sp|Q5T5P2|SKT_HUMAN Sickle tail protein homolog OS=Homo sapiens ... 29 6.3

>sp|Q6ZRV2|FA83H_HUMAN Protein FAM83H OS=Homo sapiens GN=FAM83H PE=1
SV=2
Length = 1179

Score = 35.8 bits (81), Expect = 0.067
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -3

Query: 183 PGAARPGRSRFPLPREPSRSPQVPLPPAPERRSVSCLVISGD 58
P +A P R P+P P R P+PP PERR L ISG+
Sbjct: 904 PTSAYPERRGSPVPPVPERRSS-PVPPVPERRGSLTLTISGE 944


>sp|Q7T6X1|YR610_MIMIV Uncharacterized protein R610 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R610 PE=1 SV=2
Length = 332

Score = 33.5 bits (75), Expect = 0.33
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -3

Query: 186 RPGAARPGRSRFPLPREPSRSPQVPLPPAPERR 88
RP + RP R P PR PS P P PP+P R
Sbjct: 201 RPPSPRPPSPRPPHPRPPSPRPPHPRPPSPRPR 233


>sp|Q9CWP9|U572_MOUSE UPF0572 protein OS=Mus musculus PE=2 SV=1
Length = 254

Score = 32.7 bits (73), Expect = 0.57
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3

Query: 168 PGRSRFPLPREPSRSPQVPLPPAP 97
PG PLP PSR+PQ LPP P
Sbjct: 214 PGSPLQPLPPSPSRNPQEQLPPCP 237


>sp|O35889|AFAD_RAT Afadin OS=Rattus norvegicus GN=Mllt4 PE=1 SV=1
Length = 1829

Score = 32.7 bits (73), Expect = 0.57
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Frame = -3

Query: 168 PGRSRFPLPRE---PSRSPQVPLPPAPERRSVSCL---VISGDFLF 49
PG SR PLP++ PS+S PP P +R+ S L V+S D LF
Sbjct: 1686 PGLSRPPLPQDYEPPSQSSAPSAPPPPPQRNASYLKTQVLSPDSLF 1731


>sp|Q80ZC9|PS1C2_MOUSE Psoriasis susceptibility 1 candidate gene 2
protein homolog OS=Mus musculus GN=Psors1c2 PE=2 SV=1
Length = 134

Score = 32.3 bits (72), Expect = 0.74
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3

Query: 216 WRSWADSGCCRPGAARPGRSRFPLPREP----SRSPQVPLPPAPE 94
WR DSG P + PLP +P ++ P+ P PPAPE
Sbjct: 71 WRDLPDSGAWPPKPPSTDPPKPPLPDDPWPAGTQPPENPWPPAPE 115


>sp|Q6DRA6|H2B2D_HUMAN Putative histone H2B type 2-D OS=Homo sapiens
GN=HIST2H2BD PE=5 SV=3
Length = 164

Score = 31.6 bits (70), Expect = 1.3
Identities = 26/76 (34%), Positives = 29/76 (38%), Gaps = 14/76 (18%)
Frame = -3

Query: 240 YNHQQ-IVEWRSWADSGCCRPGAARPGRSRFPLPREPSRSPQVP-------------LPP 103
YN + I RS CC P A+ P P PR P RSP P LPP
Sbjct: 84 YNKRSTITSRRSRRPCACCCP-ASWPST---PCPRAPRRSPSTPAPSESLPGPGARSLPP 139

Query: 102 APERRSVSCLVISGDF 55
+ R C V G F
Sbjct: 140 SLPPRVAGCFVSKGSF 155


>sp|Q6DN03|H2B2C_HUMAN Putative histone H2B type 2-C OS=Homo sapiens
GN=HIST2H2BC PE=5 SV=3
Length = 193

Score = 31.6 bits (70), Expect = 1.3
Identities = 26/76 (34%), Positives = 29/76 (38%), Gaps = 14/76 (18%)
Frame = -3

Query: 240 YNHQQ-IVEWRSWADSGCCRPGAARPGRSRFPLPREPSRSPQVP-------------LPP 103
YN + I RS CC P A+ P P PR P RSP P LPP
Sbjct: 84 YNKRSTITSRRSRRPCACCCP-ASWPST---PCPRAPRRSPSTPAPSESLPGPGARSLPP 139

Query: 102 APERRSVSCLVISGDF 55
+ R C V G F
Sbjct: 140 SLPPRVAGCFVSKGSF 155


>sp|Q5DU25|IQEC2_MOUSE IQ motif and SEC7 domain-containing protein 2
OS=Mus musculus GN=Iqsec2 PE=1 SV=2
Length = 1478

Score = 31.2 bits (69), Expect = 1.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Frame = -3

Query: 234 HQQIVEWRSWADSGCCRPGAAR----PGRS-----RFPLPREPSRSPQVPLPPAP 97
H+Q+V + GC G + PGR+ +P P P+ +P PLPPAP
Sbjct: 606 HRQLV----YEADGCSPHGTLKHKGPPGRAPIPHRHYPAPEGPAPAPPGPLPPAP 656


>sp|Q5JU85|IQEC2_HUMAN IQ motif and SEC7 domain-containing protein 2
OS=Homo sapiens GN=IQSEC2 PE=2 SV=1
Length = 1478

Score = 31.2 bits (69), Expect = 1.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Frame = -3

Query: 234 HQQIVEWRSWADSGCCRPGAAR----PGRS-----RFPLPREPSRSPQVPLPPAP 97
H+Q+V + GC G + PGR+ +P P P+ +P PLPPAP
Sbjct: 606 HRQLV----YEADGCSPHGTLKHKGPPGRAPIPHRHYPAPEGPAPAPPGPLPPAP 656


>sp|P24328|PERT_BORPA Pertactin OS=Bordetella parapertussis GN=prn
PE=4 SV=1
Length = 922

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3

Query: 177 AARPGRSRFPLPREPSRSPQVPLPPAPERR 88
A +PG P P +P + PQ P PP P +R
Sbjct: 574 APQPGPQPGPQPPQPPQPPQPPQPPQPPQR 603


tr_hit_id B8LRR9
Definition tr|B8LRR9|B8LRR9_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 50
Score (bit) 47.0
E-value 0.0005
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959154|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0003_O17, 5'
(323 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LRR9|B8LRR9_PICSI Putative uncharacterized protein OS=Picea... 47 5e-04
tr|A9PEP6|A9PEP6_POPTR Putative uncharacterized protein OS=Popul... 40 0.058
tr|Q9LTU5|Q9LTU5_ARATH DNA-damage inducible protein DDI1-like OS... 37 0.37
tr|Q8LF25|Q8LF25_ARATH DNA-damage inducible protein DDI1-like OS... 37 0.37
tr|Q1EBV4|Q1EBV4_ARATH At3g13235 (Putative uncharacterized prote... 37 0.37
tr|A9P3B5|A9P3B5_BRARC Anther-specific proline rich protein OS=B... 37 0.64
tr|A7Q9H3|A7Q9H3_VITVI Chromosome chr19 scaffold_66, whole genom... 37 0.64
tr|Q5B434|Q5B434_EMENI Putative uncharacterized protein OS=Emeri... 37 0.64
tr|B5MDI6|B5MDI6_HUMAN Putative uncharacterized protein FAM83H O... 36 1.1
tr|Q1B0T4|Q1B0T4_MYCSS Integral membrane protein MviN OS=Mycobac... 35 1.9
tr|B4UJY9|B4UJY9_ANASK Patatin OS=Anaeromyxobacter sp. (strain K... 35 2.4
tr|B4WMK3|B4WMK3_9SYNE RND transporter, HAE1/HME family, permeas... 35 2.4
tr|Q6H734|Q6H734_ORYSJ Os02g0198600 protein OS=Oryza sativa subs... 35 2.4
tr|B7ZZ86|B7ZZ86_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.4
tr|A2X229|A2X229_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.4
tr|A8NZ25|A8NZ25_COPC7 Putative uncharacterized protein OS=Copri... 35 2.4
tr|Q67P18|Q67P18_SYMTH NADH dehydrogenase I subunit E OS=Symbiob... 34 3.2
tr|Q2HGL8|Q2HGL8_CHAGB Putative uncharacterized protein OS=Chaet... 34 3.2
tr|Q65029|Q65029_ARMV Polyprotein P2' 119kDa OS=Arabis mosaic vi... 34 4.1
tr|Q4STD2|Q4STD2_TETNG Chromosome undetermined SCAF14243, whole ... 33 5.4
tr|A8LXH2|A8LXH2_SALAI Glycosyl transferase family 51 OS=Salinis... 33 5.4
tr|B8J551|B8J551_9DELT Patatin OS=Anaeromyxobacter dehalogenans ... 33 7.0
tr|Q8W158|Q8W158_BRAOL Anther-specific proline-rich protein OS=B... 33 7.0
tr|Q58NA5|Q58NA5_CHLIN Plus agglutinin (Fragment) OS=Chlamydomon... 33 7.0
tr|A9P3C0|A9P3C0_BRACM Anther-specific proline rich protein OS=B... 33 7.0
tr|A9P3B9|A9P3B9_BRARP Anther-specific proline rich protein OS=B... 33 7.0
tr|A9P3B8|A9P3B8_BRARC Anther-specific proline rich protein OS=B... 33 7.0
tr|A9P3B7|A9P3B7_BRARC Anther-specific proline rich protein OS=B... 33 7.0
tr|A9P3B6|A9P3B6_BRAJU Anther-specific proline rich protein OS=B... 33 7.0
tr|A9P3B4|A9P3B4_BRARA Anther-specific proline rich protein OS=B... 33 7.0

>tr|B8LRR9|B8LRR9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 407

Score = 47.0 bits (110), Expect = 5e-04
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3

Query: 84 RFFSLELEAEELGENVRALLEAETGFSLALLRLVYNSRYLPNSSTLRSAG 233
RF +LE++ +EL ENV+ALLE ET SL +L+Y+ R + N+ L S G
Sbjct: 11 RFITLEVDPQELVENVKALLEVETQVSLQQQQLLYHGREIRNTDRLSSIG 60


>tr|A9PEP6|A9PEP6_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 410

Score = 40.0 bits (92), Expect = 0.058
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +3

Query: 84 RFFSLELEAEELGENVRALLEAETGFSLALLRLVYNSRYLPNSSTLRSAG 233
+ SLE++ E ENV+ALLE ET L +L+YN R + N+ L + G
Sbjct: 11 QIISLEVDPHESVENVKALLEVETQVPLQQQQLLYNGREMRNNEKLSALG 60


>tr|Q9LTU5|Q9LTU5_ARATH DNA-damage inducible protein DDI1-like
OS=Arabidopsis thaliana PE=4 SV=1
Length = 395

Score = 37.4 bits (85), Expect = 0.37
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3

Query: 84 RFFSLELEAEELGENVRALLEAETGFSLALLRLVYNSRYLPNSSTLRSAG 233
+ +L+++++E ENV+ALLE E+ + +L+YN + NS L + G
Sbjct: 11 QIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60


>tr|Q8LF25|Q8LF25_ARATH DNA-damage inducible protein DDI1-like
OS=Arabidopsis thaliana PE=2 SV=1
Length = 414

Score = 37.4 bits (85), Expect = 0.37
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3

Query: 84 RFFSLELEAEELGENVRALLEAETGFSLALLRLVYNSRYLPNSSTLRSAG 233
+ +L+++++E ENV+ALLE E+ + +L+YN + NS L + G
Sbjct: 11 QIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60


>tr|Q1EBV4|Q1EBV4_ARATH At3g13235 (Putative uncharacterized protein
At3g13235) OS=Arabidopsis thaliana GN=At3g13235 PE=2
SV=1
Length = 414

Score = 37.4 bits (85), Expect = 0.37
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3

Query: 84 RFFSLELEAEELGENVRALLEAETGFSLALLRLVYNSRYLPNSSTLRSAG 233
+ +L+++++E ENV+ALLE E+ + +L+YN + NS L + G
Sbjct: 11 QIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60


>tr|A9P3B5|A9P3B5_BRARC Anther-specific proline rich protein
OS=Brassica rapa var. purpuraria PE=2 SV=1
Length = 517

Score = 36.6 bits (83), Expect = 0.64
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -3

Query: 183 PGAARPGRSRFPLPREPSR----SPQVPLPPAPERRSVSCLVISGDFLF 49
P A P S P P PS SP PLPP PE +++ + GD +F
Sbjct: 155 PSACPPAPSPKPSPPAPSPKPKPSPPAPLPPKPENKTIPAVFFFGDSIF 203


>tr|A7Q9H3|A7Q9H3_VITVI Chromosome chr19 scaffold_66, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00033475001
PE=4 SV=1
Length = 410

Score = 36.6 bits (83), Expect = 0.64
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +3

Query: 84 RFFSLELEAEELGENVRALLEAETGFSLALLRLVYNSRYLPNSSTLRSAG 233
+ SL+++ +E ENV+ALLE ET L +L++N + + N+ L + G
Sbjct: 11 QIISLDVDRDESVENVKALLEVETRVPLQQQQLLFNGQEMRNNEKLSALG 60


>tr|Q5B434|Q5B434_EMENI Putative uncharacterized protein
OS=Emericella nidulans GN=AN4696.2 PE=4 SV=1
Length = 1305

Score = 36.6 bits (83), Expect = 0.64
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -3

Query: 210 SWADSGCCRPGAARPGRSRFPLPREPSRSP---QVPLPPAPERRSVS 79
SW + PG++RP R + + R PSRSP V PAP+R S +
Sbjct: 281 SWNEEPNTPPGSSRPARQQHAIDRSPSRSPASLDVKPRPAPKRTSAT 327


>tr|B5MDI6|B5MDI6_HUMAN Putative uncharacterized protein FAM83H
OS=Homo sapiens GN=FAM83H PE=4 SV=1
Length = 886

Score = 35.8 bits (81), Expect = 1.1
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -3

Query: 183 PGAARPGRSRFPLPREPSRSPQVPLPPAPERRSVSCLVISGD 58
P +A P R P+P P R P+PP PERR L ISG+
Sbjct: 611 PTSAYPERRGSPVPPVPERRSS-PVPPVPERRGSLTLTISGE 651


>tr|Q1B0T4|Q1B0T4_MYCSS Integral membrane protein MviN
OS=Mycobacterium sp. (strain MCS) GN=Mmcs_5400 PE=4 SV=1
Length = 1263

Score = 35.0 bits (79), Expect = 1.9
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -3

Query: 183 PGAARPGRSRFPLPREPSRSPQVPLPPAPERRS 85
PGAARPG R P P P + +VP PAP RR+
Sbjct: 33 PGAARPGPGRRPPPAPPRQ--RVPRGPAPRRRA 63