DK959175 |
Clone id |
TST39A01NGRL0003_P15 |
Library |
TST39 |
Length |
682 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_P15. 5' end sequence. |
Accession |
DK959175 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL704Contig1 |
Sequence |
TGCTGTTGTATGCAGAGGTGAAGGCGATGAAGATGACCTTGATGCTTGTCCGTGGCTTCC ACGTTACATCCATCTGAAGCTAGCTGCTGAGTAGAGAGCTCTTATGCGGGCCTCTCAAAT CGACACGCTTTCTGTGATTTCCAAGTGAAGGGGCTTTCTGTCGGAGTTCTGAAGAAGCAA GGATGAGTATCAAAGGGGCCTTTGCTTTGAAGGGCCAATGGACTGCAAATGCAGCGAAAA CAGCCAATGCAGAAGAGGGCGCCTCTAAGGAGTGGGAGCTCCGTCCTTGTGGAATGCTCG TCCAGAAGAGGGATCCAGAGGCAGAGGCTGTCCATGCCGGACCTGTAATCAGGATCAAGG TCTCTTTTGGTCGTTCCTCTCATCGCGTTTCTGTCAACGCCCACTCCACCTTTGGTGACT TAAAAAAGCTTTTGGTTCAGCTCACTGGCCTGCAACCAAAACAGCAAAGACTTATGTACA AGGGAAAGGAGAAAGTAGACCGTGATTATCTTTCTGACGCTGGTGTAAAAGACAAGTCAA AAATTGTCTTGGTTGAGGACACAAAAGGCTGGGAGAAGACTCTCGTTGAATTGAGAAAGT CTGATGCTGATGCCAAAGCATATAAAGCAGTTGCTGAGGTCCAGCAACTAGTAGATCAAA TTTCGGGACAGATTGCTGGCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0C895 |
Definition |
sp|P0C895|Y2010_ARATH LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsis thaliana |
Align length |
73 |
Score (bit) |
45.4 |
E-value |
0.0003 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SAE3 |
Definition |
tr|A9SAE3|A9SAE3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
136 |
Score (bit) |
142.0 |
E-value |
2.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959175|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_P15, 5' (682 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SAE3|A9SAE3_PHYPA Predicted protein OS=Physcomitrella paten... 142 2e-32 tr|A9NZJ4|A9NZJ4_PICSI Putative uncharacterized protein OS=Picea... 136 1e-30 tr|A7NYB8|A7NYB8_VITVI Chromosome chr6 scaffold_3, whole genome ... 127 9e-28 tr|A7QVK4|A7QVK4_VITVI Chromosome chr16 scaffold_189, whole geno... 125 2e-27 tr|A5BKZ8|A5BKZ8_VITVI Putative uncharacterized protein OS=Vitis... 125 2e-27 tr|A7QKX5|A7QKX5_VITVI Chromosome chr8 scaffold_115, whole genom... 125 2e-27 tr|A6MD01|A6MD01_9ORYZ BAG domain-containing protein OS=Oryza br... 124 6e-27 tr|B6TFJ9|B6TFJ9_MAIZE Protein binding protein OS=Zea mays PE=2 ... 123 9e-27 tr|B6SGR1|B6SGR1_MAIZE Protein binding protein OS=Zea mays PE=2 ... 123 9e-27 tr|A7Q1A1|A7Q1A1_VITVI Chromosome chr10 scaffold_43, whole genom... 123 9e-27 tr|A5AT76|A5AT76_VITVI Putative uncharacterized protein OS=Vitis... 123 9e-27 tr|B6TJD1|B6TJD1_MAIZE Protein binding protein OS=Zea mays PE=2 ... 123 1e-26 tr|B7ZZK8|B7ZZK8_MAIZE Putative uncharacterized protein OS=Zea m... 121 5e-26 tr|B4FV61|B4FV61_MAIZE BCL-2 binding anthanogene-1 OS=Zea mays P... 121 5e-26 tr|A9RFF9|A9RFF9_PHYPA Predicted protein OS=Physcomitrella paten... 120 6e-26 tr|Q651M9|Q651M9_ORYSJ Os09g0524800 protein OS=Oryza sativa subs... 119 2e-25 tr|A3C0R9|A3C0R9_ORYSJ Putative uncharacterized protein OS=Oryza... 119 2e-25 tr|B8BDL2|B8BDL2_ORYSI Putative uncharacterized protein OS=Oryza... 118 4e-25 tr|Q9FJ86|Q9FJ86_ARATH Similarity to unknown protein (At5g52060)... 117 7e-25 tr|Q0WUQ1|Q0WUQ1_ARATH Putative uncharacterized protein At5g5206... 117 7e-25 tr|B6TTR9|B6TTR9_MAIZE Protein binding protein OS=Zea mays PE=2 ... 116 2e-24 tr|Q8LEP8|Q8LEP8_ARATH Putative uncharacterized protein OS=Arabi... 115 3e-24 tr|Q3E872|Q3E872_ARATH Uncharacterized protein At5g62100.2 (Puta... 115 3e-24 tr|B3H4L7|B3H4L7_ARATH Uncharacterized protein At5g62100.3 OS=Ar... 115 3e-24 tr|Q9LWV5|Q9LWV5_ORYSJ BAG domain containing protein-like OS=Ory... 114 4e-24 tr|Q6ZFW2|Q6ZFW2_ORYSJ Putative BAG domain containing protein OS... 114 4e-24 tr|Q0J3Y2|Q0J3Y2_ORYSJ Os08g0546100 protein OS=Oryza sativa subs... 114 4e-24 tr|Q0DF00|Q0DF00_ORYSJ Os06g0126500 protein (Fragment) OS=Oryza ... 114 4e-24 tr|B8B1X8|B8B1X8_ORYSI Putative uncharacterized protein OS=Oryza... 114 4e-24 tr|A3BVF7|A3BVF7_ORYSJ Putative uncharacterized protein OS=Oryza... 114 4e-24
>tr|A9SAE3|A9SAE3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126710 PE=4 SV=1 Length = 259
Score = 142 bits (359), Expect = 2e-32 Identities = 75/136 (55%), Positives = 98/136 (72%) Frame = +3
Query: 270 EWELRPCGMLVQKRDPEAEAVHAGPVIRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQLTG 449 EWE+RP GMLVQKRDP+A AV GP+++IKVS G H VSV AHSTFGDLK+LLV TG Sbjct: 13 EWEMRPGGMLVQKRDPDA-AVATGPLVKIKVSHGLFGHDVSVPAHSTFGDLKRLLVGDTG 71
Query: 450 LQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKAYKA 629 LQP + RL+++GKEK D + L AGVKDK+KI+LVED EK + E R+ + AK A Sbjct: 72 LQPSEMRLLFRGKEKEDGEPLHLAGVKDKAKIILVEDPAAREKKIQEQRRLERIAKTCHA 131
Query: 630 VAEVQQLVDQISGQIA 677 + ++ VD+ + Q++ Sbjct: 132 IGNIRAEVDKYASQVS 147
>tr|A9NZJ4|A9NZJ4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 254
Score = 136 bits (342), Expect = 1e-30 Identities = 69/139 (49%), Positives = 102/139 (73%), Gaps = 1/139 (0%) Frame = +3
Query: 264 SKEWELRPCGMLVQKRDPEAEAVHAG-PVIRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQ 440 S +WE+RP GMLVQ+RDP+A+ A P I+++V+ G S H VSV+ +TFG+LKKLL Sbjct: 29 SIDWEVRPGGMLVQRRDPDADQESAPCPKIKVRVTHGSSLHEVSVSMQATFGELKKLLAP 88
Query: 441 LTGLQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKA 620 TGL+P+ Q+L+++GKE+ +D+L AGVKDKSKIVL+ED EK +E+RK+ +A Sbjct: 89 ETGLEPQDQKLIFRGKERDGKDFLDLAGVKDKSKIVLMEDPMSREKKYIEMRKNAKMERA 148
Query: 621 YKAVAEVQQLVDQISGQIA 677 +A+AEV VD+++ Q++ Sbjct: 149 SRAIAEVSLEVDKLAAQLS 167
>tr|A7NYB8|A7NYB8_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024058001 PE=4 SV=1 Length = 264
Score = 127 bits (318), Expect = 9e-28 Identities = 67/135 (49%), Positives = 95/135 (70%) Frame = +3
Query: 270 EWELRPCGMLVQKRDPEAEAVHAGPVIRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQLTG 449 +WELRP GMLVQKR+ A + P+I+IKVS G H +++ A STFGDLK++L TG Sbjct: 19 DWELRPGGMLVQKRNAGDAA--SSPMIKIKVSHGSYHHYITIPAQSTFGDLKRVLAHETG 76
Query: 450 LQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKAYKA 629 L+PK+QRL+++GKEK + + L GVK+ SK++L+ED EK L E++K KAY+A Sbjct: 77 LEPKEQRLLFRGKEKENDECLHMVGVKEMSKVILLEDPASKEKKLEEMKKDQGILKAYEA 136
Query: 630 VAEVQQLVDQISGQI 674 VA V+ VD++S +I Sbjct: 137 VALVRVEVDKLSEKI 151
>tr|A7QVK4|A7QVK4_VITVI Chromosome chr16 scaffold_189, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007399001 PE=4 SV=1 Length = 343
Score = 125 bits (315), Expect = 2e-27 Identities = 62/137 (45%), Positives = 95/137 (69%), Gaps = 1/137 (0%) Frame = +3
Query: 270 EWELRPCGMLVQKRDPEAEAVHA-GPVIRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQLT 446 EWELRP GMLVQ+RDP+++ P IR++V FG H + +++ +TFG+LKK+L T Sbjct: 29 EWELRPGGMLVQRRDPDSDRSSVPAPTIRVRVKFGSIYHEIYISSQATFGELKKMLSGPT 88
Query: 447 GLQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKAYK 626 GL + Q+L++K KE+ YL AGVKD+SKI+LVED EK +E+R++ KA K Sbjct: 89 GLHHQDQKLLFKDKERDSNAYLDMAGVKDRSKILLVEDPISQEKRYLEMRRNAKMEKASK 148
Query: 627 AVAEVQQLVDQISGQIA 677 +++E+ VD+++GQ++ Sbjct: 149 SISEISLEVDRLAGQVS 165
>tr|A5BKZ8|A5BKZ8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023247 PE=4 SV=1 Length = 343
Score = 125 bits (315), Expect = 2e-27 Identities = 62/137 (45%), Positives = 95/137 (69%), Gaps = 1/137 (0%) Frame = +3
Query: 270 EWELRPCGMLVQKRDPEAEAVHA-GPVIRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQLT 446 EWELRP GMLVQ+RDP+++ P IR++V FG H + +++ +TFG+LKK+L T Sbjct: 29 EWELRPGGMLVQRRDPDSDRSSVPAPTIRVRVKFGSIYHEIYISSQATFGELKKMLSGPT 88
Query: 447 GLQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKAYK 626 GL + Q+L++K KE+ YL AGVKD+SKI+LVED EK +E+R++ KA K Sbjct: 89 GLHHQDQKLLFKDKERDSNAYLDMAGVKDRSKILLVEDPISQEKRYLEMRRNAKMEKASK 148
Query: 627 AVAEVQQLVDQISGQIA 677 +++E+ VD+++GQ++ Sbjct: 149 SISEISLEVDRLAGQVS 165
>tr|A7QKX5|A7QKX5_VITVI Chromosome chr8 scaffold_115, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001323001 PE=4 SV=1 Length = 253
Score = 125 bits (314), Expect = 2e-27 Identities = 68/131 (51%), Positives = 91/131 (69%) Frame = +3
Query: 270 EWELRPCGMLVQKRDPEAEAVHAGPVIRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQLTG 449 EWELRP GMLVQKR+ + +I IKV G + H++ V STFGDLKK LVQ TG Sbjct: 8 EWELRPGGMLVQKREDGDN--NGSAMINIKVCHGSNHHQLHVPIQSTFGDLKKRLVQETG 65
Query: 450 LQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKAYKA 629 L+PK QRL+++GKE D++ L GVKD+SK++L+E+ E+ L E R+SD +KA KA Sbjct: 66 LEPKDQRLLFRGKEIDDQECLQQVGVKDRSKLLLLEEMASKERKLEEARRSDEISKACKA 125
Query: 630 VAEVQQLVDQI 662 VAEV+ VD++ Sbjct: 126 VAEVKAEVDKL 136
>tr|A6MD01|A6MD01_9ORYZ BAG domain-containing protein OS=Oryza brachyantha PE=4 SV=1 Length = 332
Score = 124 bits (311), Expect = 6e-27 Identities = 63/136 (46%), Positives = 94/136 (69%), Gaps = 1/136 (0%) Frame = +3
Query: 270 EWELRPCGMLVQKRDPEAEAVHAG-PVIRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQLT 446 EWE+RP GMLVQKR PE++A A P IR+KV F H + VN+ ++FG+LKKLL T Sbjct: 34 EWEVRPGGMLVQKRSPESDAPAAPVPTIRVKVKFNGVYHEIYVNSQASFGELKKLLSAQT 93
Query: 447 GLQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKAYK 626 GL P+ Q+++YK KE+ + +L AGVKD+SK+VL+ED K L+E R++D +A K Sbjct: 94 GLHPEDQKIVYKDKERDSKAFLDMAGVKDRSKMVLLEDPAAQAKRLLEQRRTDKAERAAK 153
Query: 627 AVAEVQQLVDQISGQI 674 +++ + VD+I+ ++ Sbjct: 154 SISRIGLDVDKIAAKV 169
>tr|B6TFJ9|B6TFJ9_MAIZE Protein binding protein OS=Zea mays PE=2 SV=1 Length = 336
Score = 123 bits (309), Expect = 9e-27 Identities = 61/138 (44%), Positives = 95/138 (68%), Gaps = 2/138 (1%) Frame = +3
Query: 270 EWELRPCGMLVQKRDPEAEAVHAGPV--IRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQL 443 EWE+RP GMLVQKR P+A+A PV IR+KV F H + +N+ ++FG+LKK+L Sbjct: 38 EWEVRPGGMLVQKRSPDADAPAGAPVPTIRVKVKFNGVYHEIYINSQASFGELKKMLSAR 97
Query: 444 TGLQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKAY 623 TGL P+ Q+L+YK KE+ + +L AGVKD+SK+VL+ED K L+E R++D +A Sbjct: 98 TGLHPEDQKLVYKDKERDSKAFLDMAGVKDRSKLVLLEDPAAQAKRLLEQRRTDKAERAA 157
Query: 624 KAVAEVQQLVDQISGQIA 677 K+++ + VD+++ +++ Sbjct: 158 KSISRIGLDVDKLATKVS 175
>tr|B6SGR1|B6SGR1_MAIZE Protein binding protein OS=Zea mays PE=2 SV=1 Length = 334
Score = 123 bits (309), Expect = 9e-27 Identities = 61/138 (44%), Positives = 95/138 (68%), Gaps = 2/138 (1%) Frame = +3
Query: 270 EWELRPCGMLVQKRDPEAEAVHAGPV--IRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQL 443 EWE+RP GMLVQKR P+A+A PV IR+KV F H + +N+ ++FG+LKK+L Sbjct: 36 EWEVRPGGMLVQKRSPDADAPAGAPVPTIRVKVKFNGMYHEIYINSQASFGELKKMLSAR 95
Query: 444 TGLQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKAY 623 TGL P+ Q+L+YK KE+ + +L AGVKD+SK+VL+ED K L+E R++D +A Sbjct: 96 TGLHPEDQKLVYKDKERDSKAFLDMAGVKDRSKMVLLEDPAAQAKRLLEQRRTDKAERAA 155
Query: 624 KAVAEVQQLVDQISGQIA 677 K+++ + VD+++ +++ Sbjct: 156 KSISRIGLDVDKLATKVS 173
>tr|A7Q1A1|A7Q1A1_VITVI Chromosome chr10 scaffold_43, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028371001 PE=4 SV=1 Length = 256
Score = 123 bits (309), Expect = 9e-27 Identities = 58/136 (42%), Positives = 98/136 (72%) Frame = +3
Query: 270 EWELRPCGMLVQKRDPEAEAVHAGPVIRIKVSFGRSSHRVSVNAHSTFGDLKKLLVQLTG 449 EWE+RP GMLVQKR +++++ P + I+V++G + +SVN+ +TFG+LKKLL TG Sbjct: 30 EWEMRPGGMLVQKRTEKSDSL--APNLLIRVAYGALRYEISVNSQATFGELKKLLTAETG 87
Query: 450 LQPKQQRLMYKGKEKVDRDYLSDAGVKDKSKIVLVEDTKGWEKTLVELRKSDADAKAYKA 629 LQP +QRL+++GKE+ + DYL GVK +SK++L+ED E+ +E+R++ A++A Sbjct: 88 LQPGEQRLIFRGKERENGDYLDMCGVKGRSKVILMEDPSSRERRAIEMRRNAKIQTAHRA 147
Query: 630 VAEVQQLVDQISGQIA 677 +++V VD+++ Q++ Sbjct: 148 ISDVSMEVDKLAEQVS 163
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