DK959179 |
Clone id |
TST39A01NGRL0003_P21 |
Library |
TST39 |
Length |
635 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_P21. 5' end sequence. |
Accession |
DK959179 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1818Contig1 |
Sequence |
AAAGGATATAAAGCTTTTTATAAATTCCCCCGGAGGTTCTGTCACGGCTGGTATGGGGAT CTATGATGCAATCAAGTTGTGTAAGGCAGACGTGTCCACTGTTTGCTTTGGTCTTGCTGC ATCTATGGGTGCCTTTCTACTGGCTTCGGGCACTAGGGGAAAGAGATATTGCATGCCAAA TGCCCGTGTCATGATTCATCAGCCTCTTGGAGGTGCTAGTGGTTCTGCCATAGAGGTTGG TTTACAAGTACGAGAGATGATGTATCATAAAGTCAAGCTGACGAAAATAATGTCTCGATT AACAGGGAAAACAGAAGAGCAGATTGAAATAGACACAGATAGAGACTTTTTCATGAATGC ATGGGAAGCGCGGGACTATGGCTTGGTGGATGGAGTCATAGATGATGGGAAGCCCGGACT GGTAGCTCCAATTGGGGAAGCCAAAGAGCCACCAAAGACCAAAGTATGGGAGTATTGGAC AGTAAGAGATGCAAAAGAAAGGAAGACTTTACCCACTGAAACGAACGCTGGAGAAACAAA GGCAGAAGATGAAAAGCAGCCTGATACAGAAACGAAGGAAGAGGCAGCAGCAGTTTGAAC CTCAGCTTTCCACATCTAACAATTTGGGAGTCTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SXJ6 |
Definition |
sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana |
Align length |
174 |
Score (bit) |
267.0 |
E-value |
4.0e-71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW7 |
Definition |
tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic subunit OS=Picea sitchensis |
Align length |
198 |
Score (bit) |
292.0 |
E-value |
1.0e-77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959179|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_P21, 5' (635 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic su... 292 1e-77 tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic su... 289 9e-77 tr|A7PR54|A7PR54_VITVI ATP-dependent Clp protease proteolytic su... 277 3e-73 tr|A9T6I1|A9T6I1_PHYPA ATP-dependent Clp protease proteolytic su... 275 2e-72 tr|Q9ST19|Q9ST19_BRACM ATP-dependent Clp protease proteolytic su... 272 1e-71 tr|Q93YL4|Q93YL4_BRANA ATP-dependent Clp protease proteolytic su... 272 1e-71 tr|Q8W4Z1|Q8W4Z1_BRAOL ATP-dependent Clp protease proteolytic su... 271 2e-71 tr|Q9M4F0|Q9M4F0_BRANA ATP-dependent Clp protease proteolytic su... 270 4e-71 tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic su... 268 2e-70 tr|B7FH45|B7FH45_MEDTR Putative uncharacterized protein OS=Medic... 265 2e-69 tr|Q5QMT1|Q5QMT1_ORYSJ Putative ATP-dependent Clp protease, prot... 260 4e-68 tr|Q0JMF9|Q0JMF9_ORYSJ ATP-dependent Clp protease proteolytic su... 260 4e-68 tr|A2WQJ7|A2WQJ7_ORYSI ATP-dependent Clp protease proteolytic su... 260 4e-68 tr|B6TBU2|B6TBU2_MAIZE ATP-dependent Clp protease proteolytic su... 252 1e-65 tr|Q8LKH2|Q8LKH2_ORYSI ATP-dependent Clp protease OS=Oryza sativ... 220 6e-56 tr|A8IJ60|A8IJ60_CHLRE ATP-dependent Clp protease proteolytic su... 187 4e-46 tr|Q019I1|Q019I1_OSTTA ATP-dependent Clp protease proteolytic su... 186 8e-46 tr|A4RXD2|A4RXD2_OSTLU ATP-dependent Clp protease proteolytic su... 183 9e-45 tr|A0YKN7|A0YKN7_9CYAN ATP-dependent Clp protease proteolytic su... 182 1e-44 tr|A9TZR6|A9TZR6_PHYPA ATP-dependent Clp protease proteolytic su... 182 2e-44 tr|A9RE44|A9RE44_PHYPA ATP-dependent Clp protease proteolytic su... 181 4e-44 tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic su... 179 2e-43 tr|B5W1F7|B5W1F7_SPIMA ATP-dependent Clp protease, proteolytic s... 177 6e-43 tr|Q118P5|Q118P5_TRIEI ATP-dependent Clp protease proteolytic su... 176 1e-42 tr|B8HYM0|B8HYM0_9CHRO ATP-dependent Clp protease, proteolytic s... 176 1e-42 tr|Q79CM2|Q79CM2_SYNE7 ATP-dependent Clp protease proteolytic su... 175 2e-42 tr|B8K1W3|B8K1W3_CARPA ATP-dependent Clp protease proteolytic su... 174 3e-42 tr|A7Q0N7|A7Q0N7_VITVI ATP-dependent Clp protease proteolytic su... 174 3e-42 tr|Q50LH5|Q50LH5_ORYSJ ATP-dependent Clp protease proteolytic su... 173 7e-42 tr|Q0DSH2|Q0DSH2_ORYSJ ATP-dependent Clp protease proteolytic su... 173 7e-42
>tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic subunit OS=Picea sitchensis PE=2 SV=1 Length = 341
Score = 292 bits (747), Expect = 1e-77 Identities = 143/198 (72%), Positives = 164/198 (82%), Gaps = 10/198 (5%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 KDIKLFINSPGGSVTAGMGIYDA+KLCKADVSTVCFGLAASMGAFLLASGTRGKR+CMPN Sbjct: 138 KDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFCMPN 197
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 A+VMIHQPLGG GSAIE+ LQ +E+MYHK+KLTKIMSRLT K+EEQI DTDRD+F+N Sbjct: 198 AKVMIHQPLGGGGGSAIEMALQAKELMYHKIKLTKIMSRLTDKSEEQIAKDTDRDYFLNP 257
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVRDAKERKTLP--------- 514 WEA +YGL D VIDDGKPGLVAPIG+ K P K ++W YW+ D KE+K LP Sbjct: 258 WEAVEYGLADAVIDDGKPGLVAPIGDTKPPSKIEMWHYWSSEDWKEKKRLPSEQYLIKKG 317
Query: 515 TETNAGETKAE-DEKQPD 565 TE +GE+ ++ D KQP+ Sbjct: 318 TEEGSGESSSKNDSKQPN 335
>tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic subunit OS=Picea sitchensis PE=2 SV=1 Length = 341
Score = 289 bits (740), Expect = 9e-77 Identities = 142/198 (71%), Positives = 163/198 (82%), Gaps = 10/198 (5%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 KDIKLFINSPGGSVTAGMGIYDA+KLCKADVSTVCFGLAASMGAFLLASGTRGKR+CMPN Sbjct: 138 KDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFCMPN 197
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 A+VMIHQPLGG GSAIE+ LQ +E+MYHK+KLTKIMSRLT K+ EQI DTDRD+F+N Sbjct: 198 AKVMIHQPLGGGGGSAIEMALQAKELMYHKIKLTKIMSRLTDKSGEQIAKDTDRDYFLNP 257
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVRDAKERKTLP--------- 514 WEA +YGL D VIDDGKPGLVAPIG+ K P K ++W YW+ D KE+K LP Sbjct: 258 WEAVEYGLADAVIDDGKPGLVAPIGDTKPPSKIEMWHYWSSEDWKEKKRLPSEQYLIKKG 317
Query: 515 TETNAGETKAE-DEKQPD 565 TE +GE+ ++ D KQP+ Sbjct: 318 TEEGSGESSSKNDSKQPN 335
>tr|A7PR54|A7PR54_VITVI ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=GSVIVT00022336001 PE=3 SV=1 Length = 320
Score = 277 bits (709), Expect = 3e-73 Identities = 134/189 (70%), Positives = 157/189 (83%), Gaps = 4/189 (2%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 KDIKLFINSPGGSVTAG+GIYDA+KLCKADVSTVC GLAASMGAFLLASG++GKR+CMPN Sbjct: 120 KDIKLFINSPGGSVTAGLGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPN 179
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 +RVMIHQPLG A G A E+G+++REMMYHK+KL KI+SR+TGK E+QIE DTDRD FMNA Sbjct: 180 SRVMIHQPLGTAGGKATEMGIRIREMMYHKIKLNKILSRITGKPEQQIEADTDRDNFMNA 239
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVRDA-KERKTLPTE---TNA 529 WEA++YGL+D VIDDGKPGLVAP +A PPKT+VW W V + K +K LP+E Sbjct: 240 WEAKEYGLIDAVIDDGKPGLVAPTADAGPPPKTRVWGLWKVEGSRKAKKNLPSEHKLLQN 299
Query: 530 GETKAEDEK 556 G +DEK Sbjct: 300 GHQGGDDEK 308
>tr|A9T6I1|A9T6I1_PHYPA ATP-dependent Clp protease proteolytic subunit OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_141000 PE=3 SV=1 Length = 243
Score = 275 bits (702), Expect = 2e-72 Identities = 132/176 (75%), Positives = 151/176 (85%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 +DIKLFINSPGGSVTAGMGIYDA+KLCKADVSTVCFGLAASMGAFLL +GT+GKRYCMPN Sbjct: 59 RDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCFGLAASMGAFLLTAGTKGKRYCMPN 118
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 ARVMIHQPLGGA G+AI+ LQVREMM+HK KL KIMSRLTG+ E ++E DTDRD FMNA Sbjct: 119 ARVMIHQPLGGAGGTAIDGALQVREMMFHKYKLQKIMSRLTGQPEARVEADTDRDNFMNA 178
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVRDAKERKTLPTETNA 529 WEA +YGLVDGVI DG P LVAPIG EPPK K+ WT+++ +ER+ +P+E A Sbjct: 179 WEAMEYGLVDGVIGDGNPDLVAPIGSPIEPPKPKINSNWTIKEFRERRYMPSEDAA 234
>tr|Q9ST19|Q9ST19_BRACM ATP-dependent Clp protease proteolytic subunit OS=Brassica campestris GN=SP2 PE=2 SV=1 Length = 311
Score = 272 bits (696), Expect = 1e-71 Identities = 127/174 (72%), Positives = 148/174 (85%), Gaps = 1/174 (0%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 +DI LFINSPGGS+TAGMGIYDA+K CKADVSTVC GLAASMGAFLLASG++GKRYCMPN Sbjct: 126 RDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPN 185
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 ++VMIHQPLG A G A E+ ++VREMMYHK+KL KI SR+TGK E +IE DTDRD+F+N Sbjct: 186 SKVMIHQPLGSAGGKATEMSIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNP 245
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVRDAK-ERKTLPTE 520 WEA++YGLVD VIDDGKPGLVAPIG+ PP TKVW++W V K + K LPTE Sbjct: 246 WEAKEYGLVDAVIDDGKPGLVAPIGDGTPPPNTKVWDFWKVEGTKNDNKDLPTE 299
>tr|Q93YL4|Q93YL4_BRANA ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Brassica napus GN=clpP PE=2 SV=1 Length = 313
Score = 272 bits (696), Expect = 1e-71 Identities = 127/174 (72%), Positives = 148/174 (85%), Gaps = 1/174 (0%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 +DI LFINSPGGS+TAGMGIYDA+K CKADVSTVC GLAASMGAFLLASG++GKRYCMPN Sbjct: 128 RDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPN 187
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 ++VMIHQPLG A G A E+ ++VREMMYHK+KL KI SR+TGK E +IE DTDRD+F+N Sbjct: 188 SKVMIHQPLGSAGGKATEMSIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNP 247
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVRDAK-ERKTLPTE 520 WEA++YGLVD VIDDGKPGLVAPIG+ PP TKVW++W V K + K LPTE Sbjct: 248 WEAKEYGLVDAVIDDGKPGLVAPIGDGTPPPNTKVWDFWKVEGTKNDNKDLPTE 301
>tr|Q8W4Z1|Q8W4Z1_BRAOL ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Brassica oleracea GN=clpP PE=2 SV=1 Length = 279
Score = 271 bits (694), Expect = 2e-71 Identities = 126/174 (72%), Positives = 148/174 (85%), Gaps = 1/174 (0%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 +DI LFINSPGGS+TAGMGIYDA+K CKADVSTVC G+AASMGAFLLASG++GKRYCMPN Sbjct: 94 RDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGIAASMGAFLLASGSKGKRYCMPN 153
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 ++VMIHQPLG A G A E+ ++VREMMYHK+KL KI SR+TGK E +IE DTDRD+F+N Sbjct: 154 SKVMIHQPLGSAGGKATEMSIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNP 213
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVRDAK-ERKTLPTE 520 WEA++YGLVD VIDDGKPGLVAPIG+ PP TKVW++W V K + K LPTE Sbjct: 214 WEAKEYGLVDAVIDDGKPGLVAPIGDGTPPPNTKVWDFWKVEGTKNDNKDLPTE 267
>tr|Q9M4F0|Q9M4F0_BRANA ATP-dependent Clp protease proteolytic subunit OS=Brassica napus var. napus GN=ClpP PE=3 SV=1 Length = 313
Score = 270 bits (691), Expect = 4e-71 Identities = 126/174 (72%), Positives = 147/174 (84%), Gaps = 1/174 (0%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 +DI LFINSPGGS+TAGMGIYDA+K CKADVSTVC GLAASMGAFLLASG++GKRYCMPN Sbjct: 128 RDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPN 187
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 ++VMIHQPLG A G A E+ ++VREMMYHK+KL KI SR+TGK E +IE DTDRD+F+N Sbjct: 188 SKVMIHQPLGSAGGKATEMSIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNP 247
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVRDA-KERKTLPTE 520 WEA++YGLVD VIDDGKPGLVAPIG+ PP TKVW++W V + K LPTE Sbjct: 248 WEAKEYGLVDAVIDDGKPGLVAPIGDGTPPPNTKVWDFWKVEGTXNDNKDLPTE 301
>tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_25674 PE=3 SV=1 Length = 205
Score = 268 bits (686), Expect = 2e-70 Identities = 129/162 (79%), Positives = 143/162 (88%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 KDIKLFINSPGGSVTAGMGIYDA+KLCKADVSTVCFGLAASMGAFLLA+GT+GKRYCMPN Sbjct: 44 KDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPN 103
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 ARVMIHQPLGGA G+AI+ LQVREMMYHK KL KIMSRLTG+ E ++E DTDRD FMNA Sbjct: 104 ARVMIHQPLGGAGGTAIDGALQVREMMYHKYKLQKIMSRLTGQPEAKVEADTDRDNFMNA 163
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVR 487 WEA++YGLVDGVI DG P +VAPIG EPPK K+ WT++ Sbjct: 164 WEAKEYGLVDGVIGDGNPDIVAPIGSPIEPPKPKINSNWTIK 205
>tr|B7FH45|B7FH45_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 297
Score = 265 bits (677), Expect = 2e-69 Identities = 124/174 (71%), Positives = 148/174 (85%), Gaps = 1/174 (0%) Frame = +2
Query: 2 KDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPN 181 KDIKLFINSPGGSVTAGMG+YDA+KLCKADVSTVC GLAASMGAFLLA+GT+GKRYCMPN Sbjct: 118 KDIKLFINSPGGSVTAGMGVYDAMKLCKADVSTVCLGLAASMGAFLLAAGTKGKRYCMPN 177
Query: 182 ARVMIHQPLGGASGSAIEVGLQVREMMYHKVKLTKIMSRLTGKTEEQIEIDTDRDFFMNA 361 +RVMIHQPLG A G A E+ ++ RE+MYHK+K+ KI+SR+TGK EEQIE+DTDRD FMN Sbjct: 178 SRVMIHQPLGSAGGKATEMSIRARELMYHKIKINKILSRITGKPEEQIELDTDRDNFMNP 237
Query: 362 WEARDYGLVDGVIDDGKPGLVAPIGEAKEPPKTKVWEYWTVR-DAKERKTLPTE 520 WE ++YGL+D VIDDGKPGLVAPI + PPKT + W + ++K +K LP+E Sbjct: 238 WEGKEYGLIDDVIDDGKPGLVAPITDGAPPPKTMLKNIWEIEGNSKGKKKLPSE 291
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