DK959181 [AcEST]

DK959181
Clone id	TST39A01NGRL0003_P23
Library	TST39
Length	569
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0003_P23. 5' end sequence.
Accession	DK959181
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL64Contig1
Sequence	ATGGTGGATCTGTTCTTCTATCGTGAGCCAGAGGAAGCCAAGGAGCGTGAGGAGGAGGAA GGTGCTGCACCAGAATTTGCACCTACAGAGTATAATGCGCCTCCTACAATTGCTGCCGTC GCAGCAGCTCCTGACCAATGGGGTGAGGGAGGTGATGCTGGAAACTGGGAGCCAGCAGTG CCAGCCGCAGCAGCTGCTGCGGTGCAGGCCCCTGCCCAAGAGTGGACTGGAGCTGCTGCT CCTGCCCAAGGATGGGATGCTGCTCCTGCTCCTGCACCTGCCCCTGCACCGGCTCCGACT GGCACCTATTCTGCAGGCATGGCTCCTTCTGGAGCTGGATGGGATTCTGCTCCTGCTGAC TGGAATCCCACTCCTCAGTAATCTTCATTATTATCAATTTTGTAGTCTTGAGTTGACTGG CCTTGGATAAAAGCAAGAGCTGTGCTTTCGGAGATATTTGAACTCTAGATTGTCCTTTAG TCACGAGGTGCAACTTTCTTAAAAGTTGCTGGTTCAAGTTTTGATTCTAGCTACCTTTGA TTGTTGTCTCTGAAAATGAGTAATGCGAT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK959181\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_P23, 5' (569 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B0U476
Definition	tr\|B0U476\|B0U476_XYLFM Putative uncharacterized protein OS=Xylella fastidiosa (strain M12)
Align length	37
Score (bit)	35.0
E-value	2.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK959181\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0003_P23, 5' (569 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B0U476\|B0U476_XYLFM Putative uncharacterized protein OS=Xylel... 35 2.9 tr\|B2I7S5\|B2I7S5_XYLF2 Putative uncharacterized protein OS=Xylel... 33 8.5 >tr\|B0U476\|B0U476_XYLFM Putative uncharacterized protein OS=Xylella fastidiosa (strain M12) GN=Xfasm12_1758 PE=4 SV=1 Length = 90 Score = 35.0 bits (79), Expect = 2.9 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 183 WHCWLPVSSITSLTPLVRSCCDGSNCRRRIILCRCKF 73 WHCW P+ + L +V+ C G N ++CR F Sbjct: 38 WHCWEPLLQVVPLAAMVQVCDRGCNAIAGRVVCRVLF 74 >tr\|B2I7S5\|B2I7S5_XYLF2 Putative uncharacterized protein OS=Xylella fastidiosa (strain M23) GN=XfasM23_1683 PE=4 SV=1 Length = 85 Score = 33.5 bits (75), Expect = 8.5 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = -3 Query: 183 WHCWLPVSSITSLTPLVRSCCDGSNCRRRIILCRCKF 73 WHCW P+ + L + + C G N ++CR F Sbjct: 33 WHCWEPLLQVVPLAVMAQVCDRGGNAIAGRVVCRVLF 69