DK959205
Clone id TST39A01NGRL0004_A23
Library
Length 686
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_A23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTTCATGCCTTCTGCAGAGTAGCAGACGCTCTCTCTCTCTCTCTCTCTCTCTCTCACACA
CACACACACACACACACACACACACACACACACACACAGTGACACTTCGCTCTTCCAATG
CATGTGCTCATGATTTCTGCATATGCGATTTGGGCTAAAGCTGGACAGAGCGTCCTTCTG
TGAATAGGGCTCTCTGTCGCTGTGATGATTGCCACACCATAGCGCCTTTCTTGGGTCCTT
TGAACCTTTCTCTTTATCGCATTTTTGCATGCATTTTACTTCTTAAAGATGTGCGGGGCT
ATTGTGTTGGAAGGGGTGTTTAGCAGTTGAACTTGTCTGTTGGCTATGGCGACATCTGCT
TCTCATGCCTAGCTGGTTGATTTGTGCAGAAGTTGAGGTTTTTGCTCTTGGGTAGCTGGA
AATTTCTTTCTTTGAGGTGGGTTTTTGCTTGAAGATCGAAAATCTTGAGGACGGCTGCTG
TAAGAGTGGACTTTCTAGGTGCAGAAGGCAGAGCTAGAGGTGCTGCTCGTGTGCAGAAGG
CTAAGCACGAGTGGGCGCTCAAGCTGATGCAAAGAGGGAAATGATGGAGAGCTAAGAAAA
ATAGGGGAGTTTCTTGGTGCCGGAAGATTACTGAAAGATGACGACAAGGCAGGAAGGCTA
TGGAAGCAGCTCTGTAAAGCCGGGGG
■■Homology search results ■■ -
sp_hit_id Q8WVS4
Definition sp|Q8WVS4|WDR60_HUMAN WD repeat-containing protein 60 OS=Homo sapiens
Align length 109
Score (bit) 33.1
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959205|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_A23, 5'
(686 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8WVS4|WDR60_HUMAN WD repeat-containing protein 60 OS=Homo sa... 33 1.4
sp|P17098|ZNF8_HUMAN Zinc finger protein 8 OS=Homo sapiens GN=ZN... 31 5.4
sp|O74769|YO38_SCHPO Putative protein SPBC24C6.08c OS=Schizosacc... 31 5.4
sp|Q0D2J5|ZN763_HUMAN Zinc finger protein 763 OS=Homo sapiens GN... 30 9.2

>sp|Q8WVS4|WDR60_HUMAN WD repeat-containing protein 60 OS=Homo
sapiens GN=WDR60 PE=1 SV=2
Length = 1066

Score = 33.1 bits (74), Expect = 1.4
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = -3

Query: 450 KQKPTSKKEISSYPRAKTSTSAQINQLGMRSRCRHSQQTSSTAKHPFQHNSPAHL*EVKC 271
++K +++++ Y + K+ N + RH ++ +H H + +
Sbjct: 228 REKSSTREKREKYSKEKS------NSFSDKGEERHKEK---------RHKEGFHFDDERH 272

Query: 270 MQKCD-KEKGSKD-PRKALWCGNHHSDREPYSQKDALSSFSPNRICRNH 130
D KEK +KD PRK + H +R S++D SS + RNH
Sbjct: 273 QSNVDRKEKSAKDEPRKREFQNGEHRNRGASSKRDGTSSQHAENLVRNH 321


>sp|P17098|ZNF8_HUMAN Zinc finger protein 8 OS=Homo sapiens GN=ZNF8
PE=1 SV=2
Length = 575

Score = 31.2 bits (69), Expect = 5.4
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 15/91 (16%)
Frame = -3

Query: 345 SQQTSSTAKHPFQHNSPAHL*EVKCMQ--KCDKEKGSKDPRKALWCG---NH-------- 205
SQQT S K P + NS H + + + K + P K CG NH
Sbjct: 218 SQQTGSPGKQPGE-NSDCHRDSSQAIPITELTKSQVQDKPYKCTDCGKSFNHNAHLTVHK 276

Query: 204 --HSDREPYSQKDALSSFSPNRICRNHEHMH 118
H+ PY K+ +FS N HE +H
Sbjct: 277 RIHTGERPYMCKECGKAFSQNSSLVQHERIH 307


>sp|O74769|YO38_SCHPO Putative protein SPBC24C6.08c
OS=Schizosaccharomyces pombe GN=SPBC24C6.08c PE=2 SV=1
Length = 367

Score = 31.2 bits (69), Expect = 5.4
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = -3

Query: 459 SIFKQKPTSKKEISSYPRAKTSTSAQINQLGMRSRCRHSQQTSSTAKHPFQHNSPAHL*E 280
S F + PTSK+ I S A N+L R+ SQ S+ + F+ +S +L
Sbjct: 31 SKFFEHPTSKRSIGVTENGNDSPEAFKNELDNRNNA-DSQSLQSSTESLFKADSEDYL-- 87

Query: 279 VKCMQKCDK-EKGSKDPRKALWCGNHHSDREPYSQKDA 169
C K KG + PR + ++ ++ P S+K +
Sbjct: 88 ------CKKVSKGPESPRVNSFHNSYSRNQSPISRKSS 119


>sp|Q0D2J5|ZN763_HUMAN Zinc finger protein 763 OS=Homo sapiens
GN=ZNF763 PE=2 SV=2
Length = 394

Score = 30.4 bits (67), Expect = 9.2
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -3

Query: 318 HPFQHNSPAHL*EVKCMQKCDK-EKGSKDPRKALWCGNHHSDREPYSQKDALSSFSPNRI 142
H FQ + H E C +C K K + R L H+ +PY K+ +F+
Sbjct: 297 HSFQIHERTHTGEKPC--ECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSS 354

Query: 141 CRNHEHMH 118
R HE H
Sbjct: 355 LRRHERTH 362


tr_hit_id A4VDH6
Definition tr|A4VDH6|A4VDH6_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 112
Score (bit) 37.4
E-value 0.91
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959205|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_A23, 5'
(686 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4VDH6|A4VDH6_TETTH Putative uncharacterized protein OS=Tetra... 37 0.91
tr|B8LRL7|B8LRL7_PICSI Putative uncharacterized protein OS=Picea... 35 3.4

>tr|A4VDH6|A4VDH6_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00384849 PE=4
SV=1
Length = 1775

Score = 37.4 bits (85), Expect = 0.91
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = -3

Query: 450 KQKPTSKKEISSYPRAKTST----SAQINQLGMRSRCRHSQQTSSTAKHPFQHNSPAHL* 283
KQ+ T KK + + K S+ S+Q+N ++ + + K P + + AHL
Sbjct: 962 KQEETKKKPMFLKNKIKISSLKSSSSQVNSSNKENQNSLAANLNDKLKKPLKIMNSAHLD 1021

Query: 282 EVKCMQKCDK---EKGSKDPRKALWCGNHHSDREPYSQKDALSSFSPNRICR 136
++ C++K D+ GS D +W + S+ QK + + N ICR
Sbjct: 1022 KINCLEKLDEGFLATGSSDNTIKIWDMDTQSE-----QKVLQNKYIVNNICR 1068


>tr|B8LRL7|B8LRL7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 452

Score = 35.4 bits (80), Expect = 3.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3

Query: 198 RCDDCHTIAPFLGPLNLSLYRIFAC-ILLLKDVRGYCVGRGV*QLNLSVGYG 350
+C CH+ AP P S Y+ FAC +++ G C G Q +S G G
Sbjct: 145 QCQGCHSTAPIFDPAKSSSYKPFACDSQPCQEISGNCGGNSKCQFEVSYGDG 196