Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959221|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_B17, 5' (690 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 413 e-115 sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 349 7e-96 sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 347 3e-95 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 347 3e-95 sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 346 6e-95 sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 345 1e-94 sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 345 1e-94 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 345 2e-94 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 344 2e-94 sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 344 2e-94 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 343 4e-94 sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 343 6e-94 sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 343 6e-94 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 342 8e-94 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 342 8e-94 sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 342 1e-93 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 342 1e-93 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 342 1e-93 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 341 2e-93 sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro... 340 3e-93 sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 339 7e-93 sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 339 7e-93 sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 339 7e-93 sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 339 9e-93 sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 338 1e-92 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 338 2e-92 sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 338 2e-92 sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 338 2e-92 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 337 3e-92 sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 337 3e-92
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1 Length = 265
Score = 413 bits (1061), Expect = e-115 Identities = 204/215 (94%), Positives = 211/215 (98%), Gaps = 1/215 (0%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 224 MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG Sbjct: 1 MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59
Query: 225 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 404 PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA Sbjct: 60 PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119
Query: 405 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 584 KNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG Sbjct: 120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179
Query: 585 PLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 PLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL Sbjct: 180 PLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 214
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1 Length = 269
Score = 349 bits (896), Expect = 7e-96 Identities = 172/217 (79%), Positives = 190/217 (87%), Gaps = 3/217 (1%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLY 218 MAA TA S+++ +KPVNELSRKV G EARV M S+GS IWYG+DRP + Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60
Query: 219 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 398 LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 399 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 578 LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180
Query: 579 GGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 GGPLGEV DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 217
Score = 31.2 bits (69), Expect = 5.5 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = +3
Query: 231 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 410 +G P +T +D GL+ DP+TFA+ + E+ + R AM G ++ Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
Query: 411 G 413 G Sbjct: 240 G 240
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1 Length = 262
Score = 347 bits (891), Expect = 3e-95 Identities = 171/219 (78%), Positives = 189/219 (86%), Gaps = 5/219 (2%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGA-GEARVQMMA----PKKSSSGSIWYGSDRP 212 MAA+T ++SS+ +G +K VG+ GE R+ M PK ++SGS WYG DR Sbjct: 1 MAASTMAISSTAMAGTPIK--------VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRV 52
Query: 213 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 392 YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P Sbjct: 53 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 112
Query: 393 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 572 ELL++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR Sbjct: 113 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 172
Query: 573 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 +AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKEL Sbjct: 173 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEL 211
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1 Length = 267
Score = 347 bits (890), Expect = 3e-95 Identities = 170/216 (78%), Positives = 185/216 (85%), Gaps = 2/216 (0%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKK--SSSGSIWYGSDRPLYL 221 MA +T +LSSS F+G+ +K S G G ++ A K +SSGS WYG DR YL Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60
Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+ Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEI 216
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1 Length = 265
Score = 346 bits (888), Expect = 6e-95 Identities = 170/219 (77%), Positives = 189/219 (86%), Gaps = 5/219 (2%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 212 MA++T +LSS+ F+G+ + + L GEARV M A +SSGS WYG DR Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSLF-----GEARVTMRKTAAKAKPAASSGSPWYGPDRV 55
Query: 213 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 392 LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P Sbjct: 56 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 393 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 572 ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYR Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYR 175
Query: 573 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 VAGGPLGEV DP+YPGG+FDPLGLADDPEAFA++KVKEL Sbjct: 176 VAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKEL 214
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1 Length = 266
Score = 345 bits (886), Expect = 1e-94 Identities = 172/218 (78%), Positives = 185/218 (84%), Gaps = 4/218 (1%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 215 MAATT SLSSS F+G K V L G+ARV M K+ SS S WYGSDR L Sbjct: 1 MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57
Query: 216 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 395 YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE Sbjct: 58 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 396 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 575 LLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+LAIWACQV+LMGAVEGYR+ Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRI 177
Query: 576 AGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 AGGPLGE+ DP+YPGGSFDPLGLA+ P+AFAELKVKE+ Sbjct: 178 AGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEI 215
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1 Length = 265
Score = 345 bits (885), Expect = 1e-94 Identities = 173/219 (78%), Positives = 187/219 (85%), Gaps = 5/219 (2%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 212 MA++T +LSS+ F+G K VN S G EARV M A ++SGS WYG DR Sbjct: 1 MASSTMALSSTAFAG---KAVNVPSSSFG--EARVTMRKTAAKAKPAAASGSPWYGPDRV 55
Query: 213 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 392 LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV P Sbjct: 56 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115
Query: 393 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 572 ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 175
Query: 573 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 +AGGPLGEV DP+YPGGSFDPLGLADDPEAF ELKVKEL Sbjct: 176 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKEL 214
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1 Length = 267
Score = 345 bits (884), Expect = 2e-94 Identities = 170/216 (78%), Positives = 185/216 (85%), Gaps = 2/216 (0%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 221 MAA+T +LSS F+G+ +K S G G+ ++ A K SSGS WYG DR YL Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60
Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 GPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+ Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 216
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1 Length = 265
Score = 344 bits (883), Expect = 2e-94 Identities = 167/214 (78%), Positives = 181/214 (84%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227 MAA T +LSS F+GQ +K S G G ++ K + S S WYG DR YLGP Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407 FSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+ Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587 NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGP Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+ Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 214
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1 Length = 267
Score = 344 bits (883), Expect = 2e-94 Identities = 170/216 (78%), Positives = 183/216 (84%), Gaps = 2/216 (0%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEA--RVQMMAPKKSSSGSIWYGSDRPLYL 221 M A+T +LSS F+G +K S G G+A R + K SSGS WYG DR YL Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGA+EGYRVAG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+ Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEI 216
Score = 30.4 bits (67), Expect = 9.3 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = +3
Query: 231 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 410 +G P +T +D GL+ DPE FA+ + E+ + R AM G ++ Sbjct: 179 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238
Query: 411 G 413 G Sbjct: 239 G 239
|
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959221|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_B17, 5' (690 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 363 7e-99 tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 362 9e-99 tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 360 6e-98 tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 359 8e-98 tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 359 1e-97 tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 358 2e-97 tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 358 2e-97 tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 356 9e-97 tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 356 9e-97 tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 355 1e-96 tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 354 3e-96 tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T... 353 7e-96 tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 352 2e-95 tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote... 352 2e-95 tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin... 351 2e-95 tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind... 351 3e-95 tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ... 350 5e-95 tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 350 5e-95 tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 348 1e-94 tr|A8QJP9|A8QJP9_BAMOL Chloroplast light-harvesting chlorophyll ... 348 1e-94 tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 348 2e-94 tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 347 3e-94 tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 347 3e-94 tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu... 347 5e-94 tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ... 347 5e-94 tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 347 5e-94 tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC... 347 5e-94 tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O... 346 7e-94 tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 346 7e-94 tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu... 346 9e-94
>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1 Length = 263
Score = 363 bits (931), Expect = 7e-99 Identities = 177/214 (82%), Positives = 190/214 (88%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227 MAA TA S+++ LKPVNELSRKVG EARV M K S S SIWYG+DRP +LGP Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58
Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407 FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118
Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587 NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178
Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 LGEV DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 212
>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1 Length = 265
Score = 362 bits (930), Expect = 9e-99 Identities = 174/214 (81%), Positives = 192/214 (89%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227 MAA TA S+++ LKPVNELSRKVG+ EARV M KS+S SIWYG+DRP YLGP Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60
Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407 FSG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK Sbjct: 61 FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 120
Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587 +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGP Sbjct: 121 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGP 180
Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 LGE+ DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPDTFAELKVKEI 214
>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding protein 2 (Predicted protein) OS=Physcomitrella patens subsp. patens GN=PpLhcb2 PE=4 SV=1 Length = 267
Score = 360 bits (923), Expect = 6e-98 Identities = 175/216 (81%), Positives = 191/216 (88%), Gaps = 2/216 (0%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 221 MAA TA S+++ LKPVNELSRKVG+ +ARV M S+GS IWYG+DRP YL Sbjct: 1 MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60
Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401 GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120
Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581 AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 GPLGEV DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 216
>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1 Length = 263
Score = 359 bits (922), Expect = 8e-98 Identities = 174/214 (81%), Positives = 191/214 (89%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227 MAA TA S+++ LKPVNELSR+VGA EARV M K + S SIWYG+DRP +LGP Sbjct: 1 MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58
Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407 FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 118
Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587 +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP Sbjct: 119 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178
Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 LGEV DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 212
>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1 Length = 265
Score = 359 bits (921), Expect = 1e-97 Identities = 174/214 (81%), Positives = 188/214 (87%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227 MAA TA S+++ LKPVNELSRKVG EAR+ M SS SIWYG+DRP YLGP Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60
Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407 FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK Sbjct: 61 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 120
Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587 NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 180
Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 LG+V DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 181 LGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 214
>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physcomitrella patens PE=2 SV=1 Length = 268
Score = 358 bits (919), Expect = 2e-97 Identities = 174/217 (80%), Positives = 193/217 (88%), Gaps = 3/217 (1%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 218 MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP + Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60
Query: 219 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 398 LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 399 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 578 LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180
Query: 579 GGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 GGPLG+V DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 217
>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1 Length = 268
Score = 358 bits (919), Expect = 2e-97 Identities = 174/217 (80%), Positives = 193/217 (88%), Gaps = 3/217 (1%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 218 MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP + Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60
Query: 219 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 398 LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 399 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 578 LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180
Query: 579 GGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 GGPLG+V DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 217
>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1 Length = 263
Score = 356 bits (913), Expect = 9e-97 Identities = 176/214 (82%), Positives = 190/214 (88%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227 MAA TA+ S+++ LK +NELSRKVG +ARV M K SSS SIWYG+DRP YLGP Sbjct: 1 MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58
Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407 SG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK Sbjct: 59 LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118
Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587 NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP Sbjct: 119 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 178
Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 LGEV DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 212
>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1 Length = 267
Score = 356 bits (913), Expect = 9e-97 Identities = 175/216 (81%), Positives = 191/216 (88%), Gaps = 2/216 (0%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 221 MAA TA S+++ LKPVNELSRKVG EARV M A K ++S SIWYG+DRP YL Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60
Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401 GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120
Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581 AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAG 180
Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 GPLG+V DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 181 GPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 216
>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1 Length = 267
Score = 355 bits (911), Expect = 1e-96 Identities = 173/216 (80%), Positives = 190/216 (87%), Gaps = 2/216 (0%) Frame = +3
Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 221 MA TA S+++ LKPVNELSRKVG EARV M K + S SIWYG+DRP +L Sbjct: 1 MAGATAMHSTALAGQGVLKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFL 60
Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401 GPFSG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELL Sbjct: 61 GPFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELL 120
Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581 AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKEL 689 GPLGEV DPIYPGGSFDPLGLADDP+ FAELKVKE+ Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 216
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