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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959227
Clone id TST39A01NGRL0004_B23
Library
Length 288
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_B23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTTGGCGAGTCCCGACCCATTAAGCTTTTACCTGTGAGCTCGGGCAACGAGAAGACGCCT
CTCTTTCTCTGTTCTGCCTAACCTGGCGCTCGTCAGCCCCACTCCATATCTCCTCTTCTG
TGGGCTGTCAGCTGCGATTCTACCCATTCGGTAACCCTGGCTCAGAAGATCGGGAAATCG
ACTCGCAAGCCTGGTGTTATGTCCAAGGCTCTCGTGTACGCAGATGTGAATCTAAATCGC
CCTAAAGAGTACTGGGACTACGAGTCGCTCGTCGTGCAGTGGGGGGAT
■■Homology search results ■■ -
sp_hit_id O64817
Definition sp|O64817|CSK23_ARATH Probable casein kinase II subunit alpha OS=Arabidopsis thaliana
Align length 29
Score (bit) 57.4
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959227|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_B23, 5'
         (288 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O64817|CSK23_ARATH Probable casein kinase II subunit alpha OS...    57   2e-08
sp|P28523|CSK2A_MAIZE Casein kinase II subunit alpha OS=Zea mays...    57   3e-08
sp|Q08467|CSK21_ARATH Casein kinase II subunit alpha-1 OS=Arabid...    55   1e-07
sp|Q08466|CSK22_ARATH Casein kinase II subunit alpha-2 OS=Arabid...    54   2e-07
sp|O76484|CSK2A_SPOFR Casein kinase II subunit alpha OS=Spodopte...    52   9e-07
sp|P19139|CSK21_RAT Casein kinase II subunit alpha OS=Rattus nor...    51   2e-06
sp|Q60737|CSK21_MOUSE Casein kinase II subunit alpha OS=Mus musc...    51   2e-06
sp|P68400|CSK21_HUMAN Casein kinase II subunit alpha OS=Homo sap...    51   2e-06
sp|P21868|CSK21_CHICK Casein kinase II subunit alpha OS=Gallus g...    51   2e-06
sp|P68399|CSK21_BOVIN Casein kinase II subunit alpha OS=Bos taur...    51   2e-06
sp|P28020|CSK21_XENLA Casein kinase II subunit alpha OS=Xenopus ...    50   3e-06
sp|P33674|CSK21_RABIT Casein kinase II subunit alpha OS=Oryctola...    50   5e-06
sp|P18334|CSK2A_CAEEL Casein kinase II subunit alpha OS=Caenorha...    49   8e-06
sp|Q02720|CSK2A_DICDI Casein kinase II subunit alpha OS=Dictyost...    46   5e-05
sp|P08181|CSK2A_DROME Casein kinase II subunit alpha OS=Drosophi...    46   7e-05
sp|P20427|CSK22_BOVIN Casein kinase II subunit alpha' OS=Bos tau...    44   3e-04
sp|Q8TG13|CSK2A_NEUCR Casein kinase II subunit alpha OS=Neurospo...    43   6e-04
sp|O54833|CSK22_MOUSE Casein kinase II subunit alpha' OS=Mus mus...    43   6e-04
sp|P19784|CSK22_HUMAN Casein kinase II subunit alpha' OS=Homo sa...    43   6e-04
sp|P21869|CSK22_CHICK Casein kinase II subunit alpha' OS=Gallus ...    43   6e-04
sp|P15790|CSK21_YEAST Casein kinase II subunit alpha OS=Saccharo...    40   0.003
sp|P28547|CSK2A_THEPA Casein kinase II subunit alpha OS=Theileri...    36   0.052
sp|Q4U925|CSK2A_THEAN Casein kinase II subunit alpha OS=Theileri...    36   0.067
sp|P40231|CSK2A_SCHPO Casein kinase II subunit alpha OS=Schizosa...    36   0.067
sp|Q54LR6|Y6481_DICDI Probable serine/threonine-protein kinase D...    35   0.11 
sp|P19454|CSK22_YEAST Casein kinase II subunit alpha' OS=Sacchar...    33   0.33 
sp|P06602|EVE_DROME Segmentation protein even-skipped OS=Drosoph...    30   4.8  

>sp|O64817|CSK23_ARATH Probable casein kinase II subunit alpha
           OS=Arabidopsis thaliana GN=At2g23080 PE=2 SV=1
          Length = 333

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +1

Query: 199 MSKALVYADVNLNRPKEYWDYESLVVQWG 285
           MSKA VY DVN+ RPKEYWDYESLVVQWG
Sbjct: 1   MSKARVYTDVNVVRPKEYWDYESLVVQWG 29


>sp|P28523|CSK2A_MAIZE Casein kinase II subunit alpha OS=Zea mays
           GN=ACK2 PE=1 SV=1
          Length = 332

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = +1

Query: 199 MSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           MSKA VYADVN+ RPKEYWDYE+L VQWG+
Sbjct: 1   MSKARVYADVNVLRPKEYWDYEALTVQWGE 30


>sp|Q08467|CSK21_ARATH Casein kinase II subunit alpha-1
           OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=2
          Length = 333

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = +1

Query: 199 MSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           MSKA VY +VN+ RPK+YWDYESL+VQWG+
Sbjct: 1   MSKARVYTEVNVIRPKDYWDYESLIVQWGE 30


>sp|Q08466|CSK22_ARATH Casein kinase II subunit alpha-2
           OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2
          Length = 333

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +1

Query: 199 MSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           MSKA VY DVN+ RPK+YWDYESL VQWG+
Sbjct: 1   MSKARVYTDVNVIRPKDYWDYESLNVQWGE 30


>sp|O76484|CSK2A_SPOFR Casein kinase II subunit alpha OS=Spodoptera
           frugiperda PE=2 SV=1
          Length = 353

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = +1

Query: 196 VMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           V S+A VYADVN  RP+EYWDYES VV WG+
Sbjct: 5   VPSRARVYADVNSQRPREYWDYESYVVDWGN 35


>sp|P19139|CSK21_RAT Casein kinase II subunit alpha OS=Rattus
           norvegicus GN=Csnk2a1 PE=1 SV=2
          Length = 391

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 196 VMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           V S+A VY DVN +RP+EYWDYES VV+WG+
Sbjct: 5   VPSRARVYTDVNTHRPREYWDYESHVVEWGN 35


>sp|Q60737|CSK21_MOUSE Casein kinase II subunit alpha OS=Mus
           musculus GN=Csnk2a1 PE=2 SV=1
          Length = 391

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 196 VMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           V S+A VY DVN +RP+EYWDYES VV+WG+
Sbjct: 5   VPSRARVYTDVNTHRPREYWDYESHVVEWGN 35


>sp|P68400|CSK21_HUMAN Casein kinase II subunit alpha OS=Homo
           sapiens GN=CSNK2A1 PE=1 SV=1
          Length = 391

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 196 VMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           V S+A VY DVN +RP+EYWDYES VV+WG+
Sbjct: 5   VPSRARVYTDVNTHRPREYWDYESHVVEWGN 35


>sp|P21868|CSK21_CHICK Casein kinase II subunit alpha OS=Gallus
           gallus GN=CSNK2A1 PE=2 SV=1
          Length = 391

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 196 VMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           V S+A VY DVN +RP+EYWDYES VV+WG+
Sbjct: 5   VPSRARVYTDVNTHRPREYWDYESHVVEWGN 35


>sp|P68399|CSK21_BOVIN Casein kinase II subunit alpha OS=Bos taurus
           GN=CSNK2A1 PE=1 SV=1
          Length = 391

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 196 VMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           V S+A VY DVN +RP+EYWDYES VV+WG+
Sbjct: 5   VPSRARVYTDVNTHRPREYWDYESHVVEWGN 35
tr_hit_id A9NVF1
Definition tr|A9NVF1|A9NVF1_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 44
Score (bit) 79.3
E-value 9.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959227|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_B23, 5'
         (288 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NVF1|A9NVF1_PICSI Putative uncharacterized protein OS=Picea...    79   9e-14
tr|A7PLP4|A7PLP4_VITVI Chromosome chr7 scaffold_20, whole genome...    78   3e-13
tr|A5AYZ7|A5AYZ7_VITVI Putative uncharacterized protein OS=Vitis...    78   3e-13
tr|Q1EPE8|Q1EPE8_MUSAC Casein kinase II alpha subunit (Protein k...    75   2e-12
tr|Q6QJ32|Q6QJ32_ARATH Putative casein kinase II catalytic alpha...    75   2e-12
tr|O64816|O64816_ARATH Putative casein kinase II catalytic (Alph...    75   2e-12
tr|Q8VX01|Q8VX01_SINAL Casein kinase II alpha subunit OS=Sinapis...    74   5e-12
tr|Q8W5G9|Q8W5G9_ORYSJ Os03g0763000 protein OS=Oryza sativa subs...    61   3e-08
tr|Q10ES0|Q10ES0_ORYSJ Casein kinase II, alpha chain, putative, ...    61   3e-08
tr|B8AKL5|B8AKL5_ORYSI Putative uncharacterized protein OS=Oryza...    61   3e-08
tr|A9THD0|A9THD0_PHYPA Predicted protein OS=Physcomitrella paten...    60   7e-08
tr|B4FE48|B4FE48_MAIZE Putative uncharacterized protein OS=Zea m...    59   1e-07
tr|A5BCW7|A5BCW7_VITVI Putative uncharacterized protein (Chromos...    59   2e-07
tr|B3TLM4|B3TLM4_ELAGV Protein kinase CK2 alpha chain OS=Elaeis ...    58   2e-07
tr|Q4W6C2|Q4W6C2_LOLPR Casein protein kinase 2 alpha subunit OS=...    57   4e-07
tr|Q3EBV7|Q3EBV7_ARATH Uncharacterized protein At2g23080.2 OS=Ar...    57   4e-07
tr|A7NU72|A7NU72_VITVI Chromosome chr18 scaffold_1, whole genome...    57   4e-07
tr|A5ARH3|A5ARH3_VITVI Putative uncharacterized protein OS=Vitis...    57   4e-07
tr|Q9ST47|Q9ST47_MAIZE Protein kinase CK2, alpha subunit OS=Zea ...    57   5e-07
tr|Q9AR27|Q9AR27_ORYSI Casein kinase II alpha subunit OS=Oryza s...    57   5e-07
tr|Q9AQU1|Q9AQU1_ORYSJ Casein kinase II alpha subunit OS=Oryza s...    57   5e-07
tr|Q94IG2|Q94IG2_WHEAT Casein kinase II alpha OS=Triticum aestiv...    57   5e-07
tr|Q7XYB4|Q7XYB4_LILDA CK2 catalytic alpha subunit OS=Lilium dav...    57   5e-07
tr|Q4W6C1|Q4W6C1_LOLPR Casein protein kinase 2 alpha subunit OS=...    57   5e-07
tr|Q00XP7|Q00XP7_OSTTA Putative casein kinase II catalytic (ISS)...    57   5e-07
tr|B8AK92|B8AK92_ORYSI Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|B6F123|B6F123_9ORYZ Casein kinase II alpha subunit OS=Oryza g...    57   5e-07
tr|B6F122|B6F122_9ORYZ Casein kinase II alpha subunit OS=Oryza b...    57   5e-07
tr|B6F121|B6F121_9ORYZ Casein kinase II alpha subunit OS=Oryza a...    57   5e-07
tr|B6F120|B6F120_9ORYZ Casein kinase II alpha subunit OS=Oryza a...    57   5e-07

>tr|A9NVF1|A9NVF1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 435

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = +1

Query: 157 LAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           LAQKIGKS R+PGV SKA VYADVN+ RPKEYWDYE+L VQWGD
Sbjct: 89  LAQKIGKSIRRPGVTSKARVYADVNVVRPKEYWDYEALTVQWGD 132


>tr|A7PLP4|A7PLP4_VITVI Chromosome chr7 scaffold_20, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019650001
           PE=4 SV=1
          Length = 420

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = +1

Query: 154 TLAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           TLAQ+IGKS R+PG  SKA VYAD+N+ RPKEYWDYESL VQWG+
Sbjct: 77  TLAQRIGKSVRRPGAPSKARVYADINVIRPKEYWDYESLTVQWGE 121


>tr|A5AYZ7|A5AYZ7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034030 PE=4 SV=1
          Length = 392

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = +1

Query: 154 TLAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           TLAQ+IGKS R+PG  SKA VYAD+N+ RPKEYWDYESL VQWG+
Sbjct: 45  TLAQRIGKSVRRPGAPSKARVYADINVIRPKEYWDYESLTVQWGE 89


>tr|Q1EPE8|Q1EPE8_MUSAC Casein kinase II alpha subunit (Protein
           kinase), putative OS=Musa acuminata GN=MA4_8L21.24 PE=4
           SV=1
          Length = 397

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = +1

Query: 157 LAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWGD 288
           LAQKIGK+ R+PG  S+A VYAD+N++RPK+YWDYESL VQWG+
Sbjct: 70  LAQKIGKAVRRPGAPSRARVYADINVHRPKDYWDYESLTVQWGE 113


>tr|Q6QJ32|Q6QJ32_ARATH Putative casein kinase II catalytic alpha
           subunit (Fragment) OS=Arabidopsis thaliana GN=At2g23070
           PE=2 SV=1
          Length = 130

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = +1

Query: 148 SVTLAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWG 285
           S TLAQKIGKS R+ G  SKA VYADVN+ RPK+YWDYESL VQWG
Sbjct: 75  SETLAQKIGKSIRRAGAPSKARVYADVNVVRPKDYWDYESLAVQWG 120


>tr|O64816|O64816_ARATH Putative casein kinase II catalytic (Alpha)
           subunit OS=Arabidopsis thaliana GN=At2g23070/F21P24.13
           PE=2 SV=1
          Length = 432

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = +1

Query: 148 SVTLAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWG 285
           S TLAQKIGKS R+ G  SKA VYADVN+ RPK+YWDYESL VQWG
Sbjct: 82  SETLAQKIGKSIRRAGAPSKARVYADVNVVRPKDYWDYESLAVQWG 127


>tr|Q8VX01|Q8VX01_SINAL Casein kinase II alpha subunit OS=Sinapis
           alba GN=cpck2a PE=2 SV=1
          Length = 414

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = +1

Query: 148 SVTLAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWG 285
           S TLAQKIGKS R+ G  SKA VYADVN+ +PK+YWDYESL VQWG
Sbjct: 63  SETLAQKIGKSIRRAGAPSKARVYADVNVIKPKDYWDYESLAVQWG 108


>tr|Q8W5G9|Q8W5G9_ORYSJ Os03g0763000 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0002J24.6 PE=2 SV=1
          Length = 408

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = +1

Query: 91  RQPHSISPLLWAVSCDSTHSVTLAQ--KIGKSTRKPG-VMSKALVYADVNLNRPKEYWDY 261
           R+   ++P ++A +  +     L    +IG++TR PG   S A VYAD N  RPKEYWDY
Sbjct: 45  RRRRPLAPTVYAAAAAAAAEAPLPMPPRIGRATRHPGGAASVARVYADANSQRPKEYWDY 104

Query: 262 ESLVVQWGD 288
           ESL ++WG+
Sbjct: 105 ESLDIEWGE 113


>tr|Q10ES0|Q10ES0_ORYSJ Casein kinase II, alpha chain, putative,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g55490 PE=4 SV=1
          Length = 298

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = +1

Query: 91  RQPHSISPLLWAVSCDSTHSVTLAQ--KIGKSTRKPG-VMSKALVYADVNLNRPKEYWDY 261
           R+   ++P ++A +  +     L    +IG++TR PG   S A VYAD N  RPKEYWDY
Sbjct: 45  RRRRPLAPTVYAAAAAAAAEAPLPMPPRIGRATRHPGGAASVARVYADANSQRPKEYWDY 104

Query: 262 ESLVVQWGD 288
           ESL ++WG+
Sbjct: 105 ESLDIEWGE 113


>tr|B8AKL5|B8AKL5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_13642 PE=4 SV=1
          Length = 408

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = +1

Query: 91  RQPHSISPLLWAVSCDSTHSVTLAQ--KIGKSTRKPG-VMSKALVYADVNLNRPKEYWDY 261
           R+   ++P ++A +  +     L    +IG++TR PG   S A VYAD N  RPKEYWDY
Sbjct: 45  RRRRPLAPTVYAAAAAAAAEAPLPMPPRIGRATRHPGGAASVARVYADANSQRPKEYWDY 104

Query: 262 ESLVVQWGD 288
           ESL ++WG+
Sbjct: 105 ESLDIEWGE 113