DK959257 |
Clone id |
TST39A01NGRL0004_D05 |
Library |
TST39 |
Length |
646 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_D05. 5' end sequence. |
Accession |
DK959257 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL441Contig1 |
Sequence |
GATAGCTCTGCACACACAGCTGGTTTTCCTTCTCCTCCTCCTCGTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACTGTCACCCAC CCACCCACTCACCAGACAGTGATAGCGACAAATTGTTAAACCCACATTTCCTTGCATGTG TTCGCCGTGTCACACGAGCCGCAAGTAGCTGGGCGAAGGCGATCTTGGAGCCCCACAGAG GAAACTTGCGCGTCAGCATCTCTCAGGGAGTGAAAGAGGATTTGTTCTGTCATCCATTGT GGTATTTTCCAAATAGCAAGCCATCCTTTGAACCTCAGGATGGCTCTAAATCTGACGACA TTACACTCACCCTCTTCTCCAAGCGTATCTGCTCCTCAGAAGCTATCAATTCTTGCCTCT GCCCTTAATGGATGTCAGCCTAACTACAAACCAAGCATAAGGGCCTCACTATATTACCCG TTTGAACCTTACTCCATTTCACTAGTGCATCTCGCAACCTTCAGCAAAAGCACAAGAATT GTTGAAGAGTCATCTCACTCTCAAAGGTTCAGGGTCAGTCAAAGTGCTTCCTCCACTTTG TATCCAGCGGAGCTGGCCAGTGGAGGTGAGGGAGGTGGTGATGATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9CTG6 |
Definition |
sp|Q9CTG6|AT132_MOUSE Probable cation-transporting ATPase 13A2 OS=Mus musculus |
Align length |
99 |
Score (bit) |
37.7 |
E-value |
0.052 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8CIJ9 |
Definition |
tr|Q8CIJ9|Q8CIJ9_MOUSE Atp13a2 protein OS=Mus musculus |
Align length |
99 |
Score (bit) |
37.7 |
E-value |
0.6 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959257|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_D05, 5' (646 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8CIJ9|Q8CIJ9_MOUSE Atp13a2 protein OS=Mus musculus GN=Atp13a... 38 0.60 tr|A2AA78|A2AA78_MOUSE ATPase type 13A2 OS=Mus musculus GN=Atp13... 37 1.0 tr|Q5KFU8|Q5KFU8_CRYNE Septin ring protein, putative OS=Cryptoco... 36 2.3 tr|Q55QB8|Q55QB8_CRYNE Putative uncharacterized protein OS=Crypt... 36 2.3 tr|Q5ZI64|Q5ZI64_CHICK Putative uncharacterized protein OS=Gallu... 35 5.1 tr|B6K9W3|B6K9W3_TOXGO Putative uncharacterized protein OS=Toxop... 35 5.1 tr|B3PRV4|B3PRV4_RHIE6 Putative metalloprotease protein OS=Rhizo... 34 6.7 tr|B8CBD2|B8CBD2_THAPS Predicted protein OS=Thalassiosira pseudo... 34 6.7 tr|A4I0Y2|A4I0Y2_LEIIN Kinesin, putative OS=Leishmania infantum ... 34 6.7
>tr|Q8CIJ9|Q8CIJ9_MOUSE Atp13a2 protein OS=Mus musculus GN=Atp13a2 PE=2 SV=1 Length = 650
Score = 37.7 bits (86), Expect = 0.60 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Frame = +1
Query: 211 GRRRSWSPTEETCASASLRE*KRICSVIHCGIFQIASHPLNLRMALNLTTLHSPSSPSVS 390 G+R W T++ SL + R C +HC +S L+L+ T++ P+ S+ Sbjct: 157 GQRYVWMETQQAFCQVSLLDHSRTCDDVHC-----SSSGLSLQDQATRKTIYGPNVISIP 211
Query: 391 APQKLSILA-SALNGCQPNYKPSIRASLYYPFEPYSISL 504 L +LA ALN YY F+ +SI+L Sbjct: 212 VKSYLQLLADEALNP-------------YYGFQAFSIAL 237
>tr|A2AA78|A2AA78_MOUSE ATPase type 13A2 OS=Mus musculus GN=Atp13a2 PE=3 SV=1 Length = 1169
Score = 37.0 bits (84), Expect = 1.0 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Frame = +1
Query: 211 GRRRSWSPTEETCASASLRE*KRICSVIHCGIFQIASHPLNLRMALNLTTLHSPSSPSVS 390 G+R W T++ SL + R C +HC +S L+L+ T++ P+ S+ Sbjct: 165 GQRYVWMETQQAFCQVSLLDHGRTCDDVHC-----SSSGLSLQDQATRKTIYGPNVISIP 219
Query: 391 APQKLSILA-SALNGCQPNYKPSIRASLYYPFEPYSISL 504 L +LA ALN YY F+ +SI+L Sbjct: 220 VKSYLQLLADEALNP-------------YYGFQAFSIAL 245
>tr|Q5KFU8|Q5KFU8_CRYNE Septin ring protein, putative OS=Cryptococcus neoformans GN=CNF00500 PE=4 SV=1 Length = 543
Score = 35.8 bits (81), Expect = 2.3 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%) Frame = +1
Query: 361 LHSPSSPSVSAPQKLSILASALNGC---QPNYKPSIRASLYY-PFEPYSISL---VHLAT 519 L P PSVS LS+ + + GC + N P++++S ++ P P+S+ HL Sbjct: 21 LFVPGGPSVSC---LSVASDSAAGCLCQRNNITPTVQSSAFFLPTPPWSLYFPAHTHLPP 77
Query: 520 FSKSTRIVEESSHSQRFRVSQSASSTLYPAELASGGEGGG 639 + + E SHS + Q ++ ++ +E + GGG Sbjct: 78 PTMADSYYENQSHSPSPQGEQYSNDKIHHSERIASPNGGG 117
>tr|Q55QB8|Q55QB8_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans GN=CNBF4190 PE=4 SV=1 Length = 543
Score = 35.8 bits (81), Expect = 2.3 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%) Frame = +1
Query: 361 LHSPSSPSVSAPQKLSILASALNGC---QPNYKPSIRASLYY-PFEPYSISL---VHLAT 519 L P PSVS LS+ + + GC + N P++++S ++ P P+S+ HL Sbjct: 21 LFVPGGPSVSC---LSVASDSAAGCLCQRNNITPTVQSSAFFLPTPPWSLYFPAHTHLPP 77
Query: 520 FSKSTRIVEESSHSQRFRVSQSASSTLYPAELASGGEGGG 639 + + E SHS + Q ++ ++ +E + GGG Sbjct: 78 PTMADSYYENQSHSPSPQGEQYSNDKIHHSERIASPNGGG 117
>tr|Q5ZI64|Q5ZI64_CHICK Putative uncharacterized protein OS=Gallus gallus GN=RCJMB04_29p4 PE=2 SV=1 Length = 716
Score = 34.7 bits (78), Expect = 5.1 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +1
Query: 409 ILASALNGCQPNYKPSIRASLYYPFEPYSISLVHLATFSKSTRIVEESSHSQRFRVSQSA 588 + AL+GC P Y SI E Y ++ +A + ++TR V S F VS + Sbjct: 451 LFEQALDGCPPKYAKSIFLQYAQLEEHYGMARRAMAVYERATRAVLPSERRAVFEVSIAR 510
Query: 589 SSTLY 603 ++ LY Sbjct: 511 AAELY 515
>tr|B6K9W3|B6K9W3_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49 GN=TGME49_116730 PE=4 SV=1 Length = 1561
Score = 34.7 bits (78), Expect = 5.1 Identities = 30/90 (33%), Positives = 42/90 (46%) Frame = +1
Query: 355 TTLHSPSSPSVSAPQKLSILASALNGCQPNYKPSIRASLYYPFEPYSISLVHLATFSKST 534 T H + PS +P +S SAL G Q P++ S S+S ++ S S+ Sbjct: 91 TQRHLAAPPSPRSPTAVS--PSALGGAQTTSFPALHGSCQSSSSSSSLSS---SSSSSSS 145
Query: 535 RIVEESSHSQRFRVSQSASSTLYPAELASG 624 + SS S SQSASST P+ +SG Sbjct: 146 SSLSSSSSSSWPSHSQSASSTYAPSSSSSG 175
>tr|B3PRV4|B3PRV4_RHIE6 Putative metalloprotease protein OS=Rhizobium etli (strain CIAT 652) GN=RHECIAT_CH0004316 PE=4 SV=1 Length = 513
Score = 34.3 bits (77), Expect = 6.7 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 13/53 (24%) Frame = +1
Query: 349 NLTTLHSP--SSPSVSAPQK-------LSILASALNGCQ----PNYKPSIRAS 468 +LTT SP SS ++SAP++ LS +A ALNGCQ +Y+PSI S Sbjct: 8 SLTTWKSPALSSDAISAPRRFARRLMLLSAIAMALNGCQSLIEQSYQPSISPS 60
>tr|B8CBD2|B8CBD2_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_24655 PE=4 SV=1 Length = 1966
Score = 34.3 bits (77), Expect = 6.7 Identities = 23/91 (25%), Positives = 43/91 (47%) Frame = +1
Query: 328 LNLRMALNLTTLHSPSSPSVSAPQKLSILASALNGCQPNYKPSIRASLYYPFEPYSISLV 507 LN++ L + S +S + L +L S + P YK ++RASLYY +++ Sbjct: 1059 LNVQSTAALVSARVESIRQLSLARLLLVLGSPMKNQTPIYKGALRASLYYTALSWAVK-- 1116
Query: 508 HLATFSKSTRIVEESSHSQRFRVSQSASSTL 600 ++ ++S +++E +R R S L Sbjct: 1117 QSSSSTRSMTVLDEQLFIERKRTECGLESAL 1147
>tr|A4I0Y2|A4I0Y2_LEIIN Kinesin, putative OS=Leishmania infantum GN=LinJ24.1110 PE=3 SV=1 Length = 3274
Score = 34.3 bits (77), Expect = 6.7 Identities = 25/93 (26%), Positives = 43/93 (46%) Frame = +1
Query: 367 SPSSPSVSAPQKLSILASALNGCQPNYKPSIRASLYYPFEPYSISLVHLATFSKSTRIVE 546 SP++ + P ++G N PS+ + F P +++ H T S +++ E Sbjct: 759 SPAAAGAAVPGDTD--GGTIDGVFSNTSPSLESLQPLSFPPPILAMHHNRTISWTSQGSE 816
Query: 547 ESSHSQRFRVSQSASSTLYPAELASGGEGGGDD 645 E S S R S S+++ P +L G GGG + Sbjct: 817 EHSPSSRLSCG-SPSTSVSPQQLGMGLAGGGTE 848
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