DK959257
Clone id TST39A01NGRL0004_D05
Library
Length 646
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_D05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GATAGCTCTGCACACACAGCTGGTTTTCCTTCTCCTCCTCCTCGTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACTGTCACCCAC
CCACCCACTCACCAGACAGTGATAGCGACAAATTGTTAAACCCACATTTCCTTGCATGTG
TTCGCCGTGTCACACGAGCCGCAAGTAGCTGGGCGAAGGCGATCTTGGAGCCCCACAGAG
GAAACTTGCGCGTCAGCATCTCTCAGGGAGTGAAAGAGGATTTGTTCTGTCATCCATTGT
GGTATTTTCCAAATAGCAAGCCATCCTTTGAACCTCAGGATGGCTCTAAATCTGACGACA
TTACACTCACCCTCTTCTCCAAGCGTATCTGCTCCTCAGAAGCTATCAATTCTTGCCTCT
GCCCTTAATGGATGTCAGCCTAACTACAAACCAAGCATAAGGGCCTCACTATATTACCCG
TTTGAACCTTACTCCATTTCACTAGTGCATCTCGCAACCTTCAGCAAAAGCACAAGAATT
GTTGAAGAGTCATCTCACTCTCAAAGGTTCAGGGTCAGTCAAAGTGCTTCCTCCACTTTG
TATCCAGCGGAGCTGGCCAGTGGAGGTGAGGGAGGTGGTGATGATG
■■Homology search results ■■ -
sp_hit_id Q9CTG6
Definition sp|Q9CTG6|AT132_MOUSE Probable cation-transporting ATPase 13A2 OS=Mus musculus
Align length 99
Score (bit) 37.7
E-value 0.052
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959257|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_D05, 5'
(646 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9CTG6|AT132_MOUSE Probable cation-transporting ATPase 13A2 O... 38 0.052
sp|Q29485|PLMN_ERIEU Plasminogen OS=Erinaceus europaeus GN=PLG P... 33 1.7
sp|Q8NB66|UN13C_HUMAN Protein unc-13 homolog C OS=Homo sapiens G... 32 2.2
sp|A5EVQ3|LIPA_DICNV Lipoyl synthase OS=Dichelobacter nodosus (s... 31 4.8
sp|Q3UHK6|TEN4_MOUSE Teneurin-4 OS=Mus musculus GN=Odz4 PE=2 SV=2 31 6.4

>sp|Q9CTG6|AT132_MOUSE Probable cation-transporting ATPase 13A2
OS=Mus musculus GN=Atp13a2 PE=2 SV=2
Length = 1169

Score = 37.7 bits (86), Expect = 0.052
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1

Query: 211 GRRRSWSPTEETCASASLRE*KRICSVIHCGIFQIASHPLNLRMALNLTTLHSPSSPSVS 390
G+R W T++ SL + R C +HC +S L+L+ T++ P+ S+
Sbjct: 165 GQRYVWMETQQAFCQVSLLDHSRTCDDVHC-----SSSGLSLQDQATRKTIYGPNVISIP 219

Query: 391 APQKLSILA-SALNGCQPNYKPSIRASLYYPFEPYSISL 504
L +LA ALN YY F+ +SI+L
Sbjct: 220 VKSYLQLLADEALNP-------------YYGFQAFSIAL 245


>sp|Q29485|PLMN_ERIEU Plasminogen OS=Erinaceus europaeus GN=PLG PE=2
SV=1
Length = 810

Score = 32.7 bits (73), Expect = 1.7
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2

Query: 237 CGAPRSPS-PSYLRLV*HGEHMQGNVGLTICRYHC 136
C P PS P+Y L+ +GEH QGNV +T+ C
Sbjct: 262 CTTPPPPSGPTYQCLMGNGEHYQGNVAVTVSGLTC 296


>sp|Q8NB66|UN13C_HUMAN Protein unc-13 homolog C OS=Homo sapiens
GN=UNC13C PE=2 SV=3
Length = 2214

Score = 32.3 bits (72), Expect = 2.2
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = +1

Query: 349 NLTTLHSPSSPSVSAPQKLSILASALNGCQPNYKPS------IRASLYYPFEPYSISLVH 510
NL+T +S S S + NG Q N K + + L YS SL
Sbjct: 74 NLSTEEDEASKEFSLSPTFSYRVAIANGLQKNAKVTNSDNEDLLQELSSIESSYSESLNE 133

Query: 511 LATFSKSTRIVEESSHSQRFRVSQSASSTLYPAELASGGE 630
L + ST +S+H+ R ++ +SS+L P+E +S GE
Sbjct: 134 LRS---STENQAQSTHTMPVRRNRKSSSSLAPSEGSSDGE 170


>sp|A5EVQ3|LIPA_DICNV Lipoyl synthase OS=Dichelobacter nodosus
(strain VCS1703A) GN=lipA PE=3 SV=1
Length = 324

Score = 31.2 bits (69), Expect = 4.8
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3

Query: 165 HFLACVRRVTRAASSWAKAILEPH---RGNLRVSISQGVKEDLFCHPLWYFP 311
HF AC+R + R + IL P R L V I D+F H L P
Sbjct: 152 HFAACIREIRRVSPKMTIEILTPDFRGRAELAVQILSATPPDVFNHNLETIP 203


>sp|Q3UHK6|TEN4_MOUSE Teneurin-4 OS=Mus musculus GN=Odz4 PE=2 SV=2
Length = 2771

Score = 30.8 bits (68), Expect = 6.4
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = +1

Query: 370 PSSPSVSAPQKLSILA------SALNGCQPNYKPSIRASLYYPFEPYSISLVHL 513
P P + A Q+ ++A S L+ P YK +R SL +P P+++ VHL
Sbjct: 1042 PIVPEIQALQEEIVIAGCKMRLSYLSSRTPGYKSVLRISLTHPTIPFNLMKVHL 1095


tr_hit_id Q8CIJ9
Definition tr|Q8CIJ9|Q8CIJ9_MOUSE Atp13a2 protein OS=Mus musculus
Align length 99
Score (bit) 37.7
E-value 0.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959257|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_D05, 5'
(646 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8CIJ9|Q8CIJ9_MOUSE Atp13a2 protein OS=Mus musculus GN=Atp13a... 38 0.60
tr|A2AA78|A2AA78_MOUSE ATPase type 13A2 OS=Mus musculus GN=Atp13... 37 1.0
tr|Q5KFU8|Q5KFU8_CRYNE Septin ring protein, putative OS=Cryptoco... 36 2.3
tr|Q55QB8|Q55QB8_CRYNE Putative uncharacterized protein OS=Crypt... 36 2.3
tr|Q5ZI64|Q5ZI64_CHICK Putative uncharacterized protein OS=Gallu... 35 5.1
tr|B6K9W3|B6K9W3_TOXGO Putative uncharacterized protein OS=Toxop... 35 5.1
tr|B3PRV4|B3PRV4_RHIE6 Putative metalloprotease protein OS=Rhizo... 34 6.7
tr|B8CBD2|B8CBD2_THAPS Predicted protein OS=Thalassiosira pseudo... 34 6.7
tr|A4I0Y2|A4I0Y2_LEIIN Kinesin, putative OS=Leishmania infantum ... 34 6.7

>tr|Q8CIJ9|Q8CIJ9_MOUSE Atp13a2 protein OS=Mus musculus GN=Atp13a2
PE=2 SV=1
Length = 650

Score = 37.7 bits (86), Expect = 0.60
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1

Query: 211 GRRRSWSPTEETCASASLRE*KRICSVIHCGIFQIASHPLNLRMALNLTTLHSPSSPSVS 390
G+R W T++ SL + R C +HC +S L+L+ T++ P+ S+
Sbjct: 157 GQRYVWMETQQAFCQVSLLDHSRTCDDVHC-----SSSGLSLQDQATRKTIYGPNVISIP 211

Query: 391 APQKLSILA-SALNGCQPNYKPSIRASLYYPFEPYSISL 504
L +LA ALN YY F+ +SI+L
Sbjct: 212 VKSYLQLLADEALNP-------------YYGFQAFSIAL 237


>tr|A2AA78|A2AA78_MOUSE ATPase type 13A2 OS=Mus musculus GN=Atp13a2
PE=3 SV=1
Length = 1169

Score = 37.0 bits (84), Expect = 1.0
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1

Query: 211 GRRRSWSPTEETCASASLRE*KRICSVIHCGIFQIASHPLNLRMALNLTTLHSPSSPSVS 390
G+R W T++ SL + R C +HC +S L+L+ T++ P+ S+
Sbjct: 165 GQRYVWMETQQAFCQVSLLDHGRTCDDVHC-----SSSGLSLQDQATRKTIYGPNVISIP 219

Query: 391 APQKLSILA-SALNGCQPNYKPSIRASLYYPFEPYSISL 504
L +LA ALN YY F+ +SI+L
Sbjct: 220 VKSYLQLLADEALNP-------------YYGFQAFSIAL 245


>tr|Q5KFU8|Q5KFU8_CRYNE Septin ring protein, putative
OS=Cryptococcus neoformans GN=CNF00500 PE=4 SV=1
Length = 543

Score = 35.8 bits (81), Expect = 2.3
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = +1

Query: 361 LHSPSSPSVSAPQKLSILASALNGC---QPNYKPSIRASLYY-PFEPYSISL---VHLAT 519
L P PSVS LS+ + + GC + N P++++S ++ P P+S+ HL
Sbjct: 21 LFVPGGPSVSC---LSVASDSAAGCLCQRNNITPTVQSSAFFLPTPPWSLYFPAHTHLPP 77

Query: 520 FSKSTRIVEESSHSQRFRVSQSASSTLYPAELASGGEGGG 639
+ + E SHS + Q ++ ++ +E + GGG
Sbjct: 78 PTMADSYYENQSHSPSPQGEQYSNDKIHHSERIASPNGGG 117


>tr|Q55QB8|Q55QB8_CRYNE Putative uncharacterized protein
OS=Cryptococcus neoformans GN=CNBF4190 PE=4 SV=1
Length = 543

Score = 35.8 bits (81), Expect = 2.3
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = +1

Query: 361 LHSPSSPSVSAPQKLSILASALNGC---QPNYKPSIRASLYY-PFEPYSISL---VHLAT 519
L P PSVS LS+ + + GC + N P++++S ++ P P+S+ HL
Sbjct: 21 LFVPGGPSVSC---LSVASDSAAGCLCQRNNITPTVQSSAFFLPTPPWSLYFPAHTHLPP 77

Query: 520 FSKSTRIVEESSHSQRFRVSQSASSTLYPAELASGGEGGG 639
+ + E SHS + Q ++ ++ +E + GGG
Sbjct: 78 PTMADSYYENQSHSPSPQGEQYSNDKIHHSERIASPNGGG 117


>tr|Q5ZI64|Q5ZI64_CHICK Putative uncharacterized protein OS=Gallus
gallus GN=RCJMB04_29p4 PE=2 SV=1
Length = 716

Score = 34.7 bits (78), Expect = 5.1
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1

Query: 409 ILASALNGCQPNYKPSIRASLYYPFEPYSISLVHLATFSKSTRIVEESSHSQRFRVSQSA 588
+ AL+GC P Y SI E Y ++ +A + ++TR V S F VS +
Sbjct: 451 LFEQALDGCPPKYAKSIFLQYAQLEEHYGMARRAMAVYERATRAVLPSERRAVFEVSIAR 510

Query: 589 SSTLY 603
++ LY
Sbjct: 511 AAELY 515


>tr|B6K9W3|B6K9W3_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_116730 PE=4 SV=1
Length = 1561

Score = 34.7 bits (78), Expect = 5.1
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = +1

Query: 355 TTLHSPSSPSVSAPQKLSILASALNGCQPNYKPSIRASLYYPFEPYSISLVHLATFSKST 534
T H + PS +P +S SAL G Q P++ S S+S ++ S S+
Sbjct: 91 TQRHLAAPPSPRSPTAVS--PSALGGAQTTSFPALHGSCQSSSSSSSLSS---SSSSSSS 145

Query: 535 RIVEESSHSQRFRVSQSASSTLYPAELASG 624
+ SS S SQSASST P+ +SG
Sbjct: 146 SSLSSSSSSSWPSHSQSASSTYAPSSSSSG 175


>tr|B3PRV4|B3PRV4_RHIE6 Putative metalloprotease protein
OS=Rhizobium etli (strain CIAT 652) GN=RHECIAT_CH0004316
PE=4 SV=1
Length = 513

Score = 34.3 bits (77), Expect = 6.7
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 13/53 (24%)
Frame = +1

Query: 349 NLTTLHSP--SSPSVSAPQK-------LSILASALNGCQ----PNYKPSIRAS 468
+LTT SP SS ++SAP++ LS +A ALNGCQ +Y+PSI S
Sbjct: 8 SLTTWKSPALSSDAISAPRRFARRLMLLSAIAMALNGCQSLIEQSYQPSISPS 60


>tr|B8CBD2|B8CBD2_THAPS Predicted protein OS=Thalassiosira pseudonana
CCMP1335 GN=THAPSDRAFT_24655 PE=4 SV=1
Length = 1966

Score = 34.3 bits (77), Expect = 6.7
Identities = 23/91 (25%), Positives = 43/91 (47%)
Frame = +1

Query: 328 LNLRMALNLTTLHSPSSPSVSAPQKLSILASALNGCQPNYKPSIRASLYYPFEPYSISLV 507
LN++ L + S +S + L +L S + P YK ++RASLYY +++
Sbjct: 1059 LNVQSTAALVSARVESIRQLSLARLLLVLGSPMKNQTPIYKGALRASLYYTALSWAVK-- 1116

Query: 508 HLATFSKSTRIVEESSHSQRFRVSQSASSTL 600
++ ++S +++E +R R S L
Sbjct: 1117 QSSSSTRSMTVLDEQLFIERKRTECGLESAL 1147


>tr|A4I0Y2|A4I0Y2_LEIIN Kinesin, putative OS=Leishmania infantum
GN=LinJ24.1110 PE=3 SV=1
Length = 3274

Score = 34.3 bits (77), Expect = 6.7
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +1

Query: 367 SPSSPSVSAPQKLSILASALNGCQPNYKPSIRASLYYPFEPYSISLVHLATFSKSTRIVE 546
SP++ + P ++G N PS+ + F P +++ H T S +++ E
Sbjct: 759 SPAAAGAAVPGDTD--GGTIDGVFSNTSPSLESLQPLSFPPPILAMHHNRTISWTSQGSE 816

Query: 547 ESSHSQRFRVSQSASSTLYPAELASGGEGGGDD 645
E S S R S S+++ P +L G GGG +
Sbjct: 817 EHSPSSRLSCG-SPSTSVSPQQLGMGLAGGGTE 848