DK959272 |
Clone id |
TST39A01NGRL0004_D20 |
Library |
TST39 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_D20. 5' end sequence. |
Accession |
DK959272 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL57Contig1 |
Sequence |
GTGGCCATGATGGTCCCTTTGGTGCTACCGGTGTGAAGAGATTGAAGAGTATTGGTATGA TTGACAAGGTCCCTGGCATGAAGGCCCTAGACATGAATGCTGCGGAGGATGCAATTGTTA AGTTCACACGTGAGGTGGTGCCTGGCATGATTGTAACGGGTATGGAAGTCGCTGAGATTG ATGGCTCTCCTAGGATGGGACCTACTTTTGGAGCTATGATGGTGTCTGGACAGAAGGCAG CTCACCTTGCCCTGAAGGCTCTTGGGCTTCCCAATGCTCTGGATGGCTCCTACAAACTGG GCGGAGTGCATCCCGAAACTCTGGTGCTGGCATCTGCTGAGGACGAGACTGCCTCTGCGT AGCTTTGTTTTTTGATGATAAGGCTAGATTAGGAGCTGATTGGAACCGAAAAGAAGCGTC TTTATCTTTTGCTGTGTAAATGCTTTTCCTTTCAATAAATATGAGCTCTTAGGGTTTTTA AAAGANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
119 |
Score (bit) |
175.0 |
E-value |
8.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959272|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_D20, 5' (479 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 175 8e-44 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 170 3e-42 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 163 4e-40 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 155 1e-37 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 150 2e-36 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 109 7e-24 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 108 1e-23 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 107 3e-23 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 100 3e-21 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 97 4e-20 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 78 2e-14 sp|A4WKY7|THI4_PYRAR Putative thiazole biosynthetic enzyme OS=Py... 66 7e-11 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 63 8e-10 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 63 8e-10 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 62 1e-09 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 62 2e-09 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 62 2e-09 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 62 2e-09 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 61 2e-09 sp|Q975R0|THI4_SULTO Putative thiazole biosynthetic enzyme OS=Su... 61 3e-09 sp|A4YIV7|THI4_METS5 Putative thiazole biosynthetic enzyme OS=Me... 61 3e-09 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 59 1e-08 sp|A1RW13|THI4_PYRIL Putative thiazole biosynthetic enzyme OS=Py... 57 4e-08 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 56 7e-08 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 55 1e-07 sp|P84548|THI4_POPEU Thiazole biosynthetic enzyme (Fragments) OS... 55 1e-07 sp|Q3IMI0|THI4_NATPD Putative thiazole biosynthetic enzyme OS=Na... 55 1e-07 sp|A6UPZ7|THI4_METVS Putative thiazole biosynthetic enzyme OS=Me... 52 1e-06 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 52 1e-06 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 52 1e-06
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 175 bits (444), Expect = 8e-44 Identities = 88/119 (73%), Positives = 99/119 (83%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHDGPFGATGVKRLKSIGMI++VPGMKALDMN+AEDAIV+ TREVVPGMIVTGMEVAEID Sbjct: 239 GHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEID 298
Query: 183 GSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGVHPETLVLASAEDETASA 359 G+PRMGPTFGAMM+SGQ PNALDG+Y +GGVHPE ++ A+ ETA A Sbjct: 299 GAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTY-VGGVHPELILAAADSAETADA 356
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 170 bits (431), Expect = 3e-42 Identities = 85/119 (71%), Positives = 95/119 (79%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHDGPFGATGVK L+SIGMID VPGMKALDMN AEDAIV+ TRE+VPGMIVTGMEVAEID Sbjct: 235 GHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEID 294
Query: 183 GSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGVHPETLVLASAEDETASA 359 G+PRMGPTFGAMM+SGQ PNALDGSY +GG+HPE ++ A+ E A A Sbjct: 295 GAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSY-VGGIHPELILAAADSAEIADA 352
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 163 bits (412), Expect = 4e-40 Identities = 83/119 (69%), Positives = 93/119 (78%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHDGPFGATGVKRLKSIGMID VPGMKALDMN AEDAIV+ TREVVPGMIVTGMEVAEID Sbjct: 232 GHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEID 291
Query: 183 GSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGVHPETLVLASAEDETASA 359 G+PRMGPTFGAMM+SGQ PNA+DG+ +G + PE ++ A+ ET A Sbjct: 292 GAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTL-VGNLSPELVLAAADSAETVDA 349
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 155 bits (391), Expect = 1e-37 Identities = 80/120 (66%), Positives = 90/120 (75%), Gaps = 1/120 (0%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHDGPFGATGVKRL+ IGMI VPGMKALDMNAAED IV+ TREVVPGMIVTGMEVAEID Sbjct: 235 GHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLTREVVPGMIVTGMEVAEID 294
Query: 183 GSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSY-KLGGVHPETLVLASAEDETASA 359 G+PRMGPTFGAMM+SGQ PNA+DG+ ++ E V+AS +DE A Sbjct: 295 GAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTIPEVSPALREEFVIASKDDEVVDA 354
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 150 bits (380), Expect = 2e-36 Identities = 78/119 (65%), Positives = 88/119 (73%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHDGPFGATGVKRL+ IGMI VPGMKALDMN AED IV+ TREVVPGMIVTGMEVAEID Sbjct: 238 GHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEID 297
Query: 183 GSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGVHPETLVLASAEDETASA 359 G+PRMGPTFGAMM+SGQ PNA+DG+ + E L++A +DE A Sbjct: 298 GAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGT--MSPPLREELMIAYKDDEVVDA 354
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 109 bits (272), Expect = 7e-24 Identities = 52/76 (68%), Positives = 64/76 (84%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHD P GA VKRL S+G I+K+ GM+ LDMN AEDAIVK TRE+VPG+IV GME++E+D Sbjct: 229 GHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVD 288
Query: 183 GSPRMGPTFGAMMVSG 230 G+ RMGPTFGAM++SG Sbjct: 289 GANRMGPTFGAMVLSG 304
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 108 bits (270), Expect = 1e-23 Identities = 52/76 (68%), Positives = 63/76 (82%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHDGPFGA KRL S+G +DK+ GM+ LDMN+AEDAIVK TREV G+I+ GME++EID Sbjct: 232 GHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVKNTREVTKGLIIGGMELSEID 291
Query: 183 GSPRMGPTFGAMMVSG 230 G RMGPTFGAM++SG Sbjct: 292 GFNRMGPTFGAMVLSG 307
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 107 bits (267), Expect = 3e-23 Identities = 52/76 (68%), Positives = 63/76 (82%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHDGP GA VKRL S+ I+K+ GM+ LDMN AEDAIVK TRE+VPG+IV GME++E+D Sbjct: 225 GHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVD 284
Query: 183 GSPRMGPTFGAMMVSG 230 G+ RMGPTFGAM +SG Sbjct: 285 GANRMGPTFGAMALSG 300
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 100 bits (250), Expect = 3e-21 Identities = 50/76 (65%), Positives = 57/76 (75%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHDGPFGA VKRL S ++ + M+ LDMN AED IVK TREV PGMIV GME++E D Sbjct: 231 GHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFD 290
Query: 183 GSPRMGPTFGAMMVSG 230 G+ RMGPTFG MM SG Sbjct: 291 GANRMGPTFGGMMFSG 306
>sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1 Length = 338
Score = 97.1 bits (240), Expect = 4e-20 Identities = 46/77 (59%), Positives = 59/77 (76%) Frame = +3
Query: 3 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 182 GHDGPFGA VKR+ S G+ + + M+ LDM AED I TRE++PG+IV GME++E D Sbjct: 237 GHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHIANKTREILPGLIVGGMELSEFD 296
Query: 183 GSPRMGPTFGAMMVSGQ 233 GS RMGPTFGAM++SG+ Sbjct: 297 GSARMGPTFGAMLLSGK 313
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SMC8 |
Definition |
tr|A9SMC8|A9SMC8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
119 |
Score (bit) |
179.0 |
E-value |
8.0e-44 |
Report |
|