DK959282
Clone id TST39A01NGRL0004_E06
Library
Length 661
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_E06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GACGTTCATTTGCTGGTAACGGGAGCTAACGTTGTCCAAGTCATCGAGGACAGCCAAATG
CAGGCGCTTTTAGCAGCAAATGATGTCTCCTTTGGCGGCGATGATGAGCTTGGGGCGAAC
AGCGACGATGAGGGAGTCGCCCTAAAGCATACGTTGAGGAGAAAGAGCAAGAAGAGGAAA
GCTGCAGAAAGCTGGGAAAGCATGAAGCTGGCTGATGGAGCAATTGCTAGAGTCAGTGAT
GTAGAGGGCAATGAGGGTGCTTGTGAAAGCAAGGAAACTGTGCCAAGCTTTGGCCACAAA
AGGGAAGCTGAAGCAATTGCTGGATCAAGTGATAGCAGTAGTGGTAGCGGCAGTGATAAC
GAAGAATTGAGCGATGAGGGGGAAGACTCAATAGATCAAGATGGAGAGAAGAGAATAGAT
CAATCTACAGCTTTTGGAAGAGCTTTTCGAAAGATCATGAAAAAGAAGTTGCCCTCATCT
GACCTCAGTGAGGCTATGAGTCCCATTCTAAGTGCTCACAAACAACTCGTAGCCAAGAAA
TTGGAGGAGGCTGCAGAAGGACAAAAGAAAAGAAGTGAAAGCAAAAAGGAAAAGCAAGCT
CTTCGGGAGAAAGGCCATCTTGTCCCAGCTCCATTTGCTGCTGCAAAAGATAAAGAGTTG
A
■■Homology search results ■■ -
sp_hit_id A4JPY1
Definition sp|A4JPY1|MHPA1_BURVG 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase 1 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
Align length 39
Score (bit) 31.6
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959282|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_E06, 5'
(661 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A4JPY1|MHPA1_BURVG 3-(3-hydroxy-phenyl)propionate/3-hydroxyci... 32 3.9
sp|Q9SLC4|ATL2K_ARATH RING-H2 finger protein ATL2K OS=Arabidopsi... 30 8.7

>sp|A4JPY1|MHPA1_BURVG
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid
hydroxylase 1 OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=mhpA1 PE=3 SV=1
Length = 615

Score = 31.6 bits (70), Expect = 3.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1

Query: 202 MKLADGAIARVSDVEGNEGACESKETVPSFGHKREAEAI 318
+++ADG+I R+ D GN A S T P+FG EA I
Sbjct: 476 VRVADGSIVRLDDAIGNRFAILSWGTDPTFGLTPEARRI 514


>sp|Q9SLC4|ATL2K_ARATH RING-H2 finger protein ATL2K OS=Arabidopsis
thaliana GN=ATL2K PE=2 SV=1
Length = 217

Score = 30.4 bits (67), Expect = 8.7
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = -2

Query: 207 LHAFPAF--CSFPLLALSPQRML*GDSLIVAVRPKLIIAAKGDIICC*KRLHLAVLDDLD 34
LH AF SF +++ P+R L DSL++A P ++ K D+ + L++L++ D
Sbjct: 54 LHRRSAFQDLSFSVVSQPPKRGL--DSLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKD 111

Query: 33 N 31
N
Sbjct: 112 N 112


tr_hit_id A9NSK7
Definition tr|A9NSK7|A9NSK7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 91
Score (bit) 62.4
E-value 2.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959282|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_E06, 5'
(661 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NSK7|A9NSK7_PICSI Putative uncharacterized protein OS=Picea... 62 2e-08
tr|A9TKH9|A9TKH9_PHYPA Predicted protein OS=Physcomitrella paten... 58 5e-07
tr|Q53LZ3|Q53LZ3_ORYSJ Os11g0266000 protein OS=Oryza sativa subs... 58 6e-07
tr|A3CAC1|A3CAC1_ORYSJ Putative uncharacterized protein OS=Oryza... 58 6e-07
tr|A2ZD80|A2ZD80_ORYSI Putative uncharacterized protein OS=Oryza... 58 6e-07
tr|B4FYQ9|B4FYQ9_MAIZE Putative uncharacterized protein OS=Zea m... 56 2e-06
tr|A7Q2X0|A7Q2X0_VITVI Chromosome chr12 scaffold_47, whole genom... 51 6e-05
tr|B8A1S3|B8A1S3_MAIZE Putative uncharacterized protein OS=Zea m... 47 8e-04
tr|B6T9B0|B6T9B0_MAIZE Putative uncharacterized protein OS=Zea m... 47 8e-04
tr|Q9LUB0|Q9LUB0_ARATH Genomic DNA, chromosome 5, P1 clone:MIF21... 42 0.026
tr|B6EUA7|B6EUA7_ARATH Putative uncharacterized protein At5g4824... 42 0.026
tr|B3H5R1|B3H5R1_ARATH Uncharacterized protein At5g48240.1 OS=Ar... 42 0.026
tr|A5ADW8|A5ADW8_VITVI Putative uncharacterized protein OS=Vitis... 40 0.13

>tr|A9NSK7|A9NSK7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 334

Score = 62.4 bits (150), Expect = 2e-08
Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +1

Query: 400 DGEKRIDQ----STAFGRAFRKIMKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAAEGXX 567
DGE R+ Q S F AF +IM+KK+ +A+ P+LSAHK+L+AKKL+E AE
Sbjct: 117 DGETRVVQFAEGSNGFRAAFSRIMEKKVAD----DALGPVLSAHKKLIAKKLDEEAE-FK 171

Query: 568 XXXXXXXXXXALREKGHLVPAPFAAAKDKEL 660
LREKGH+ P F AK+K L
Sbjct: 172 VKSEAKKEKRLLREKGHVKPEIFFDAKEKSL 202


>tr|A9TKH9|A9TKH9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_170589 PE=4 SV=1
Length = 550

Score = 58.2 bits (139), Expect = 5e-07
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +1

Query: 400 DGEKRIDQSTAFGRAFRKIMKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAAEGXXXXXX 579
DG+ +S+A+ RAF KI++ K + P+L+A + LVA+KL E AE
Sbjct: 243 DGKDDATKSSAYSRAFSKILQSKAAKESDT---GPVLAARQTLVARKLNEEAEDTKEKKE 299

Query: 580 XXXXXXALREKGHLVPAPFAAAKDKEL 660
LREK HL+P +A K+KEL
Sbjct: 300 SKKEKRELREKAHLIPQTYANTKEKEL 326


>tr|Q53LZ3|Q53LZ3_ORYSJ Os11g0266000 protein OS=Oryza sativa subsp.
japonica GN=Os11g0266000 PE=2 SV=1
Length = 310

Score = 57.8 bits (138), Expect = 6e-07
Identities = 36/77 (46%), Positives = 41/77 (53%)
Frame = +1

Query: 430 AFGRAFRKIMKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAAEGXXXXXXXXXXXXALRE 609
AF AF KIM KKLP L PILSAHK+LVA KL E AE E
Sbjct: 121 AFRVAFTKIMAKKLPDDPLG----PILSAHKKLVAAKLAEDAEEHKPKGEGRREKRMAAE 176

Query: 610 KGHLVPAPFAAAKDKEL 660
KGH++P +K+KEL
Sbjct: 177 KGHVIPTNHLDSKEKEL 193


>tr|A3CAC1|A3CAC1_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032243 PE=4 SV=1
Length = 278

Score = 57.8 bits (138), Expect = 6e-07
Identities = 36/77 (46%), Positives = 41/77 (53%)
Frame = +1

Query: 430 AFGRAFRKIMKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAAEGXXXXXXXXXXXXALRE 609
AF AF KIM KKLP L PILSAHK+LVA KL E AE E
Sbjct: 121 AFRVAFTKIMAKKLPDDPLG----PILSAHKKLVAAKLAEDAEEHKPKGEGRREKRMAAE 176

Query: 610 KGHLVPAPFAAAKDKEL 660
KGH++P +K+KEL
Sbjct: 177 KGHVIPTNHLDSKEKEL 193


>tr|A2ZD80|A2ZD80_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35743 PE=4 SV=1
Length = 317

Score = 57.8 bits (138), Expect = 6e-07
Identities = 36/77 (46%), Positives = 41/77 (53%)
Frame = +1

Query: 430 AFGRAFRKIMKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAAEGXXXXXXXXXXXXALRE 609
AF AF KIM KKLP L PILSAHK+LVA KL E AE E
Sbjct: 121 AFRVAFTKIMAKKLPDDPLG----PILSAHKKLVAAKLAEDAEEHKPKGEGRREKRMAAE 176

Query: 610 KGHLVPAPFAAAKDKEL 660
KGH++P +K+KEL
Sbjct: 177 KGHVIPTNHLDSKEKEL 193


>tr|B4FYQ9|B4FYQ9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 322

Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/77 (45%), Positives = 39/77 (50%)
Frame = +1

Query: 430 AFGRAFRKIMKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAAEGXXXXXXXXXXXXALRE 609
AF AF KIM KKLP L PILSAHK LVA KL E E E
Sbjct: 133 AFRVAFLKIMAKKLPDDPLG----PILSAHKTLVAAKLAEEVEEHKPKREARKEKRVAAE 188

Query: 610 KGHLVPAPFAAAKDKEL 660
KGH++P +K+KEL
Sbjct: 189 KGHVIPKDHLDSKEKEL 205


>tr|A7Q2X0|A7Q2X0_VITVI Chromosome chr12 scaffold_47, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029062001
PE=4 SV=1
Length = 274

Score = 51.2 bits (121), Expect = 6e-05
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Frame = +1

Query: 394 DQDGE------KRIDQSTAFGRAFRKIMKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAA 555
D++GE K + AF AF+KI+KK + SD+S + P+LS HK+LVA+KL E
Sbjct: 68 DEEGEIQPGITKLTEGCRAFRLAFKKIIKKNV--SDIS--LGPVLSGHKKLVAEKLAEEE 123

Query: 556 EGXXXXXXXXXXXXALREKGHLVPAPFAAAKDKEL 660
L EKGH+ PA F + +K L
Sbjct: 124 ADQKVKGDVKKEKHLLGEKGHVKPANFLDSHEKFL 158


>tr|B8A1S3|B8A1S3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 181

Score = 47.4 bits (111), Expect = 8e-04
Identities = 29/68 (42%), Positives = 33/68 (48%)
Frame = +1

Query: 457 MKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAAEGXXXXXXXXXXXXALREKGHLVPAPF 636
M KKLP L PILSAHK LVA KL E E EKGH++P
Sbjct: 1 MAKKLPDDPLG----PILSAHKTLVAAKLAEEVEEHKPKREARKEKRVAAEKGHVIPKDH 56

Query: 637 AAAKDKEL 660
+K+KEL
Sbjct: 57 LDSKEKEL 64


>tr|B6T9B0|B6T9B0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 181

Score = 47.4 bits (111), Expect = 8e-04
Identities = 29/68 (42%), Positives = 33/68 (48%)
Frame = +1

Query: 457 MKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAAEGXXXXXXXXXXXXALREKGHLVPAPF 636
M KKLP L PILSAHK LVA KL E E EKGH++P
Sbjct: 1 MAKKLPDDPLG----PILSAHKTLVAAKLAEEVEEHKPKREARKEKRVAAEKGHVIPKDH 56

Query: 637 AAAKDKEL 660
+K+KEL
Sbjct: 57 LDSKEKEL 64


>tr|Q9LUB0|Q9LUB0_ARATH Genomic DNA, chromosome 5, P1 clone:MIF21
OS=Arabidopsis thaliana GN=At5g48240 PE=4 SV=1
Length = 339

Score = 42.4 bits (98), Expect = 0.026
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +1

Query: 418 DQSTAFGRAFRKIMKKKLPSSDLSEAMSPILSAHKQLVAKKLEEAAEGXXXXXXXXXXXX 597
D AF AF+ IMKK + + + P+LSAHK L+ +KL E
Sbjct: 126 DGCNAFKIAFKAIMKK----TKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAKH 181

Query: 598 ALREKGHLVPAPFAAAKDKEL 660
+ EKGH+ P + + +K L
Sbjct: 182 LIAEKGHVKPGSYLDSHEKIL 202