DK959284 |
Clone id |
TST39A01NGRL0004_E08 |
Library |
TST39 |
Length |
699 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_E08. 5' end sequence. |
Accession |
DK959284 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL57Contig1 |
Sequence |
GCCAGTTTCTGCCTTTCCGCTGCTACAGCCATGGCGTGTTTCGCTGCTGCTTCCGCAGCC ATCTCCTCCTCCTCTTTTGCCGATGTCTCGGCTAAATTATGTTTCTCCTCTTCTTCCTCC GTTTCTGGCTCTCGCCTTTGCGCACCTGTCTCTCTAACGGTTCCTTCCTCCCGCGCCCGC TCGTCGTCCGTGTCTGCTGCACTGTATTCTGATTCCTCATATGACCTTTCCTCCTTCAAG TTTGAGCCCATTCGGGAATCCATTGTTGCCCGTGAGATGACCCGCCGCTACATGACAGAC ATGATCACCCATGCAGACACTGATGTTGTGGTTGTGGGTGCTGGTTCTGCTGGCCTGTCA TGTGCGTATGAGCTCAGCAAGAACCCCAACGTCAAGGTTGCCATTGTGGAGCAGTCTGTA AGCCCAGGTGGTGGAGCTTGGCTCGGTGGGCAGCTCTTCTCTGCCATGATTGTAAGGAAG CCAGCCCACCTCTTCCTTGATGAGATTGGTGTGCCCTACGATGAGAAGGATACCTATGTT GTTATCAAGCATGCTGCGCTCTTCACATCCACCATCATGAGCAAGCTTCTGGCCAGGCCA AATGTGAAGCTCTTTAATGCGGTTGCTGCAGAGGATCTGATAATTAAGGAGAATCGTGTA GCGGGTGTGGTCACAAATTGGGGCTCTTGTGTCTATGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
149 |
Score (bit) |
263.0 |
E-value |
7.0e-70 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959284|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_E08, 5' (699 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 263 7e-70 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 262 2e-69 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 253 7e-67 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 249 1e-65 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 247 5e-65 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 203 8e-52 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 197 3e-50 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 192 2e-48 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 190 6e-48 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 187 4e-47 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 183 9e-46 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 108 4e-23 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 105 3e-22 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 101 3e-21 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 99 2e-20 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 97 6e-20 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 89 2e-17 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 86 3e-16 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 84 6e-16 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 84 7e-16 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 83 2e-15 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 82 3e-15 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 81 5e-15 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 78 5e-14 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 76 2e-13 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 76 2e-13 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 73 1e-12 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 73 1e-12 sp|Q12U93|THI4_METBU Putative thiazole biosynthetic enzyme OS=Me... 73 2e-12 sp|A0B880|THI4_METTP Putative thiazole biosynthetic enzyme OS=Me... 72 3e-12
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 263 bits (672), Expect = 7e-70 Identities = 126/149 (84%), Positives = 140/149 (93%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 414 FKF+PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSKNPN+++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 415 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 594 SVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 595 RPNVKLFNAVAAEDLIIKENRVAGVVTNW 681 RPNVKLFNAVAAEDLI+K RV GVVTNW Sbjct: 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNW 211
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 262 bits (669), Expect = 2e-69 Identities = 129/149 (86%), Positives = 140/149 (93%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 414 F F+PI+ESIV+REMTRRYMTDMIT+A+TD GAGSAGLS AYE+SKNPNV+VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 415 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 594 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV YDE+DTYVV+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 595 RPNVKLFNAVAAEDLIIKENRVAGVVTNW 681 RPNVKLFNAVAAEDLI+K NRV GVVTNW Sbjct: 176 RPNVKLFNAVAAEDLIVKGNRVGGVVTNW 204
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 253 bits (646), Expect = 7e-67 Identities = 122/149 (81%), Positives = 135/149 (90%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 414 F+F PI+ESIV+REMTRRYMTDMITHADTD GAGSAGLSCAYELSK+P V VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 415 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 594 SVSPGGGAWLGGQLFSAM+VR+PAHLFLDE+GV YDE + YVV+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 595 RPNVKLFNAVAAEDLIIKENRVAGVVTNW 681 RPNVKLFNAVA EDLI++ RV GVVTNW Sbjct: 179 RPNVKLFNAVAVEDLIVRRGRVGGVVTNW 207
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 249 bits (636), Expect = 1e-65 Identities = 122/149 (81%), Positives = 134/149 (89%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 414 F+F PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSK+P V +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 415 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 594 SVSPGGGAWLGGQLFSAM+VRKPAHLFLDE+GV YDE + YVVIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 595 RPNVKLFNAVAAEDLIIKENRVAGVVTNW 681 RPNVKLFNAVA EDLI++ RV GVVTNW Sbjct: 182 RPNVKLFNAVAVEDLIVRGGRVGGVVTNW 210
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 247 bits (630), Expect = 5e-65 Identities = 122/149 (81%), Positives = 135/149 (90%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 414 F F+PI+ESIV+REMTRRYM DMIT+ADTD GAGS+GL C YELSKNP+V+VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQ 118
Query: 415 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 594 SVSPGGGAWLGGQLFS M+VRKPAHLFLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 595 RPNVKLFNAVAAEDLIIKENRVAGVVTNW 681 RPNVKLFNAVAAEDLI+K RV GVVTNW Sbjct: 179 RPNVKLFNAVAAEDLIVKGGRVGGVVTNW 207
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 203 bits (516), Expect = 8e-52 Identities = 100/155 (64%), Positives = 126/155 (81%), Gaps = 6/155 (3%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVE 411 F F PIRES V+R MTRRY +D+ +A++D GAGSAGL+ AY + ++ P++K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 412 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 591 SV+PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY+++ YVV+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 592 ARPNVKLFNAVAAEDLIIKE-----NRVAGVVTNW 681 A PNVKLFNA A EDLI+KE R+AGVVTNW Sbjct: 169 ALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNW 203
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 197 bits (502), Expect = 3e-50 Identities = 100/154 (64%), Positives = 120/154 (77%), Gaps = 5/154 (3%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 411 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L K P++K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 412 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 591 SVSPGGGAWLGGQLFSAMI+RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 592 ARPNVKLFNAVAAEDLIIKEN----RVAGVVTNW 681 PN+KLFNA EDLI + + R+AGVVTNW Sbjct: 164 QMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNW 197
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 192 bits (487), Expect = 2e-48 Identities = 97/154 (62%), Positives = 118/154 (76%), Gaps = 5/154 (3%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 411 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS Y L K P++K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 412 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 591 SVSPGGGAWLGGQLFSAM++RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 592 ARPNVKLFNAVAAEDLIIKEN----RVAGVVTNW 681 PN KLFNA EDLI + + R++GVVTNW Sbjct: 168 QLPNCKLFNATCVEDLITRPSKEGVRISGVVTNW 201
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 190 bits (483), Expect = 6e-48 Identities = 100/157 (63%), Positives = 124/157 (78%), Gaps = 8/157 (5%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSK-NPNVKVAIVE 411 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L+K P++K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 412 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDE--KDTYVVIKHAALFTSTIMSK 585 SVSPGGGAWLGGQLFSAM++R+PA +FL+E+GVPY+E YVV+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 586 LLARPNVKLFNAVAAEDLIIK--EN---RVAGVVTNW 681 +L+ PNVKLFNA A EDLI + EN ++AGVV NW Sbjct: 168 VLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNW 204
>sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1 Length = 326
Score = 187 bits (476), Expect = 4e-47 Identities = 94/156 (60%), Positives = 118/156 (75%), Gaps = 7/156 (4%) Frame = +1
Query: 235 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 411 FKF PIRES V+R MT RY D+ A +D GAGS+GLS AY ++KN P++KV I+E Sbjct: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
Query: 412 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 591 SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ +PY+++ YVV+KHAALF ST++SK+L Sbjct: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
Query: 592 ARPNVKLFNAVAAEDLIIK------ENRVAGVVTNW 681 PNVKLFNA EDL+ + E VAGVVTNW Sbjct: 158 QLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNW 193
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
149 |
Score (bit) |
271.0 |
E-value |
2.0e-71 |
Report |
|