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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959308
Clone id TST39A01NGRL0004_F09
Library
Length 638
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_F09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGTGAATGCCACCCTCATGAACATTGCTGATAACCCTACCAACGTGCAGCTACCTGGTGT
GTACATCAAAGAAGAGATTCCCCGGGTCCCCATTATTGTGACAGGAAATGATTTCTCCAC
TCTTTATGCACCATTGATCCGCGATGGGCGCATGGAGAAGTTTTACTGGGCTCCAACAAG
AGAGGATAGAATTGGTGTATGTAATGGTATCTTCAGGGCCGACAATGTCCCTGAAAGTGA
CATCACCAAGATTGTGGATACTTTCCCTGGGCAATCCATTGACTTCTTTGGTGCTTTGAG
AGCCCGCGTGTATGATGATGAGGTCCGAAAGTGGGTTGCTGAGACCGGTGTGGAGCAAAT
GGGCAAGAAGTTGGTGAACTCTAGGGAGGGACCCCCGACATTCACGAAGCCAACCATGAC
CGTCGACAAACTTCTTGAGTATGGGTTTATGTTGGTGAAGGAGCAAGAGAACGTGAAAAG
GGTGCAATTGGCTGAGAAGTACCTCAATGAAGCTGCACTTGGAGAGGCGAACGAAGATTC
TATTAAGCAGGGCACGTTCTAGTAGATTTGGTTGAAGAGCAACCATCCATGGTTGTCCAT
CACCACGATGTGTTGCACCACTATGCTACACCAGGACG
■■Homology search results ■■ -
sp_hit_id Q7X999
Definition sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata
Align length 186
Score (bit) 329.0
E-value 6.0e-90
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959308|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_F09, 5'
         (638 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   329   6e-90
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   325   9e-89
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   321   2e-87
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   320   3e-87
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   318   1e-86
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   318   1e-86
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   317   3e-86
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   312   8e-85
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   311   2e-84
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   310   3e-84
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   310   5e-84
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   306   8e-83
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   299   9e-81
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   298   2e-80
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   278   2e-74
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   250   5e-66
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...   208   2e-53
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...   204   3e-52
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...    75   4e-13
sp|P84562|RCA_POPEU Ribulose bisphosphate carboxylase/oxygenase ...    47   8e-05
sp|Q9EQJ0|TPC1_MOUSE Two pore calcium channel protein 1 OS=Mus m...    35   0.33 
sp|A8E5C5|DS7CA_DANRE Dehydrogenase/reductase SDR family member ...    32   2.1  
sp|Q4JVG0|AROC_CORJK Chorismate synthase OS=Corynebacterium jeik...    32   3.6  
sp|Q9W590|LSG1_DROME Large subunit GTPase 1 homolog OS=Drosophil...    31   4.7  
sp|Q03001|BPA1_HUMAN Bullous pemphigoid antigen 1, isoforms 1/2/...    31   4.7  
sp|Q15650|TRIP4_HUMAN Activating signal cointegrator 1 OS=Homo s...    31   6.2  
sp|P09346|KNOB_PLAFG Knob-associated histidine-rich protein OS=P...    30   8.1  
sp|P13817|KNOB_PLAFA Knob-associated histidine-rich protein (Fra...    30   8.1  
sp|Q9QZY9|CD1B4_CAVPO T-cell surface glycoprotein CD1b4 OS=Cavia...    30   8.1  

>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  329 bits (844), Expect = 6e-90
 Identities = 157/186 (84%), Positives = 174/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 250 VNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 309

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR DNVPE DI K+VD FPGQSIDFFGALRARVYDDEVRKWV+E GV+ +
Sbjct: 310 EDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTI 369

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNS+EGPPTF +P MT+DKLL+YG MLV+EQENVKRVQLA+KY++EAALG+AN+D+
Sbjct: 370 GKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDA 429

Query: 542 IKQGTF 559
           IK+GTF
Sbjct: 430 IKRGTF 435


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  325 bits (834), Expect = 9e-89
 Identities = 153/186 (82%), Positives = 174/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 241 VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 300

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           +DR+GVC GIFR DNVP+ DI KIVD+FPGQSIDFFGALRARVYDDEVRKWV++TGVE +
Sbjct: 301 DDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENI 360

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GK+LVNSREGPP F +P MT++KL+EYG+MLVKEQENVKRVQLAE+YL+EAALG+AN D+
Sbjct: 361 GKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDA 420

Query: 542 IKQGTF 559
           +K G+F
Sbjct: 421 MKTGSF 426


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  321 bits (823), Expect = 2e-87
 Identities = 154/186 (82%), Positives = 170/186 (91%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KEE  RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 252 VNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 311

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           +DR+GVC GIFR D VPE DITK+VDTFPGQSIDFFGALRARVYDDEVRKW++  GV+  
Sbjct: 312 DDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDAT 371

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNS+EGPPTF +P M++DKLL+YG MLV+EQENVKRVQLA+KYLNEAALG ANED+
Sbjct: 372 GKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDA 431

Query: 542 IKQGTF 559
           IK G+F
Sbjct: 432 IKSGSF 437


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  320 bits (821), Expect = 3e-87
 Identities = 154/186 (82%), Positives = 171/186 (91%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 250 VNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 309

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR DNV + DI K+VDTFPGQSIDFFGALRARVY DEVRKWV+E GV+ +
Sbjct: 310 EDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTI 369

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNS+EGPP+F +P MT+DKLL YG MLV+EQENVKRVQLA+KY++EAALG+AN D+
Sbjct: 370 GKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDA 429

Query: 542 IKQGTF 559
           IK+GTF
Sbjct: 430 IKRGTF 435


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  318 bits (816), Expect = 1e-86
 Identities = 153/186 (82%), Positives = 170/186 (91%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 250 VNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 309

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR+DNV + DI K+VDTFPGQSIDFFGALRARVYDDEVRKW+   GV+ +
Sbjct: 310 EDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSI 369

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNS+EGPPTF +P MT++KLLEYG MLV+EQENVKRVQLA+KYL+EAALG+AN D+
Sbjct: 370 GKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDA 429

Query: 542 IKQGTF 559
           +  GTF
Sbjct: 430 MNTGTF 435


>sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3
          Length = 433

 Score =  318 bits (816), Expect = 1e-86
 Identities = 152/186 (81%), Positives = 170/186 (91%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 246 VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 305

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR D V E  + ++VDTFPGQSIDFFGALRARVYDDEVR+WV+ETGVE +
Sbjct: 306 EDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENI 365

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
            +KLVNS+EGPPTF +P +T++KLLEYG MLV EQENVKRVQLA+KYLNEAALGEANED+
Sbjct: 366 ARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDA 425

Query: 542 IKQGTF 559
           +K G+F
Sbjct: 426 MKTGSF 431


>sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase
           activase B, chloroplastic OS=Hordeum vulgare GN=RCAB
           PE=2 SV=1
          Length = 425

 Score =  317 bits (813), Expect = 3e-86
 Identities = 151/186 (81%), Positives = 169/186 (90%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIAD PTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 237 VNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 296

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR DNVP+  + ++VDTFPGQSIDFFGALRARVYDDEVRKWV E GVE +
Sbjct: 297 EDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENI 356

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
            K+LVNSREGPPTF +P MT++KL+EYG MLV+EQENVKRVQLA+KYL+EAALG+AN+D+
Sbjct: 357 SKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDA 416

Query: 542 IKQGTF 559
           +K G F
Sbjct: 417 MKTGAF 422


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  312 bits (800), Expect = 8e-85
 Identities = 150/186 (80%), Positives = 167/186 (89%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y K+E  RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 254 VNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 313

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR DNVP  D+ KIVD FPGQSIDFFGALRARVYDDEVRKWV+ TG+E++
Sbjct: 314 EDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKI 373

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           G KL+NS +GPPTF +P MT++KLLEYG MLV+EQENVKRVQLA+KYL EAALG+AN D+
Sbjct: 374 GDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADA 433

Query: 542 IKQGTF 559
           I  G+F
Sbjct: 434 INNGSF 439


>sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA
           PE=2 SV=1
          Length = 439

 Score =  311 bits (796), Expect = 2e-84
 Identities = 152/186 (81%), Positives = 165/186 (88%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y K+E  RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 254 VNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 313

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR DNVPE  + KIVDTFPGQSIDFFGALRARVYDDEVRKWV+ TG+E +
Sbjct: 314 EDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAI 373

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           G KL+NS +GPPTF +P MTV+KLLEYG MLV+EQENVKRVQLAE YL EAALG+AN D+
Sbjct: 374 GDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADA 433

Query: 542 IKQGTF 559
           I  G F
Sbjct: 434 INTGNF 439


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
           PE=2 SV=1
          Length = 441

 Score =  310 bits (795), Expect = 3e-84
 Identities = 150/186 (80%), Positives = 166/186 (89%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KE+  RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 254 VNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 313

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR D VPE DI ++VD  PGQSIDFFGALRARVYDDEVRKW++  GV+ +
Sbjct: 314 EDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSV 373

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNS+EGPPTF +P MT+DKLL Y  MLV+EQENVKRVQLA++YLNEAALG ANED+
Sbjct: 374 GKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDA 433

Query: 542 IKQGTF 559
           IK G+F
Sbjct: 434 IKSGSF 439
tr_hit_id A7PNR4
Definition tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera
Align length 186
Score (bit) 330.0
E-value 3.0e-89
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959308|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_F09, 5'
         (638 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   330   3e-89
tr|A8QIH7|A8QIH7_MORAL Chloroplast ribulose-1,5-bisphosphate car...   330   4e-89
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   327   4e-88
tr|A9PG25|A9PG25_POPTR Putative uncharacterized protein OS=Popul...   327   5e-88
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   326   6e-88
tr|Q9AT38|Q9AT38_ORYSA Ribulose-1,5-bisphosphate carboxylase act...   325   1e-87
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza...   325   1e-87
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen...   325   1e-87
tr|A6N1P5|A6N1P5_ORYSI Ribulose bisphosphate carboxylase/oxygena...   325   1e-87
tr|Q19RP2|Q19RP2_9MAGN Ribulose-1,5-bisphosphate carboxylase/oxy...   325   1e-87
tr|Q9AXG0|Q9AXG0_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   324   2e-87
tr|Q308Y6|Q308Y6_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   324   3e-87
tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   323   5e-87
tr|Q9ATC1|Q9ATC1_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   323   5e-87
tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   323   5e-87
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   323   5e-87
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea...   323   5e-87
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea...   323   5e-87
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   323   5e-87
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   323   5e-87
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car...   323   7e-87
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   322   1e-86
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul...   322   1e-86
tr|A9NXN4|A9NXN4_PICSI Putative uncharacterized protein OS=Picea...   321   3e-86
tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten...   320   4e-86
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   319   8e-86
tr|Q9FUI0|Q9FUI0_MAIZE Ribulose 1,5-bisphosphate carboxylase/oxy...   318   1e-85
tr|B6T416|B6T416_MAIZE Ribulose bisphosphate carboxylase/oxygena...   318   1e-85
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   318   2e-85
tr|A9TBN9|A9TBN9_PHYPA Predicted protein OS=Physcomitrella paten...   317   4e-85

>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
           PE=4 SV=1
          Length = 474

 Score =  330 bits (847), Expect = 3e-89
 Identities = 159/186 (85%), Positives = 174/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 250 VNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 309

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR+DN+P+ D+ K+VDTFPGQSIDFFGALRARVYDDEVRKWVA  GVE +
Sbjct: 310 EDRIGVCTGIFRSDNIPKEDMVKLVDTFPGQSIDFFGALRARVYDDEVRKWVASVGVEGI 369

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNS+EGPPTF KP MT+DKLLEYG MLV+EQENVKRVQLA+KYL+EAALG+ANED+
Sbjct: 370 GKKLVNSKEGPPTFEKPKMTLDKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANEDA 429

Query: 542 IKQGTF 559
           IK G+F
Sbjct: 430 IKSGSF 435


>tr|A8QIH7|A8QIH7_MORAL Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase (Fragment) OS=Morus alba
           var. multicaulis PE=2 SV=1
          Length = 246

 Score =  330 bits (846), Expect = 4e-89
 Identities = 160/186 (86%), Positives = 174/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 24  VNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 83

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR+D+VPE DI KIVDTFPGQSIDFFGALRARVYDDEVRKW++  GVE +
Sbjct: 84  EDRIGVCTGIFRSDHVPEEDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVETI 143

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNS+EGPPTF +P MTV+KLLEYG MLV+EQENVKRVQLA+KYL+EAALG+AN+DS
Sbjct: 144 GKKLVNSKEGPPTFDQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANQDS 203

Query: 542 IKQGTF 559
           IK GTF
Sbjct: 204 IKSGTF 209


>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 475

 Score =  327 bits (838), Expect = 4e-88
 Identities = 158/186 (84%), Positives = 173/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 253 VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 312

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIF+ DNVPE DI K+VDTFPGQSIDFFGALRARVYDDEVRKWV+  GVE +
Sbjct: 313 EDRIGVCIGIFKTDNVPEDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVESI 372

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNSREGPPTF +P MTV+KL EYG MLVKEQENVKRVQLA+KYL++AALGEAN+D+
Sbjct: 373 GKKLVNSREGPPTFEQPPMTVEKLFEYGNMLVKEQENVKRVQLADKYLSDAALGEANQDA 432

Query: 542 IKQGTF 559
           I++GTF
Sbjct: 433 IERGTF 438


>tr|A9PG25|A9PG25_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 361

 Score =  327 bits (837), Expect = 5e-88
 Identities = 157/186 (84%), Positives = 173/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KE+ PRVP+IVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 174 VNATLMNIADNPTNVQLPGMYNKEDNPRVPVIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 233

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIF+ DNVPE DI K+VDTFPGQSIDFFGALRARVYDDEVRKWV+  GVE +
Sbjct: 234 EDRIGVCIGIFKTDNVPEDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVESI 293

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNSREGPPTF +P MTV+KL EYG MLVKEQENVKRVQLA+KYL++AALGEAN+D+
Sbjct: 294 GKKLVNSREGPPTFEQPPMTVEKLFEYGNMLVKEQENVKRVQLADKYLSDAALGEANQDA 353

Query: 542 IKQGTF 559
           I++GTF
Sbjct: 354 IERGTF 359


>tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase 1 OS=Gossypium hirsutum
           PE=2 SV=1
          Length = 438

 Score =  326 bits (836), Expect = 6e-88
 Identities = 157/186 (84%), Positives = 170/186 (91%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 253 VNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 312

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           EDRIGVC GIFR DNVP  DI K+VDTFPGQSIDFFGALRARVYDDEVRKW+ E GV  +
Sbjct: 313 EDRIGVCTGIFRTDNVPVDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWIGEVGVNSV 372

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNSREGPP+F +PTMT++KLLEYG MLV EQENVKRVQLA+KYL+EAALG AN+D+
Sbjct: 373 GKKLVNSREGPPSFEQPTMTIEKLLEYGNMLVAEQENVKRVQLADKYLSEAALGNANDDA 432

Query: 542 IKQGTF 559
           IK+G F
Sbjct: 433 IKRGAF 438


>tr|Q9AT38|Q9AT38_ORYSA Ribulose-1,5-bisphosphate carboxylase
           activase (Fragment) OS=Oryza sativa PE=2 SV=1
          Length = 193

 Score =  325 bits (834), Expect = 1e-87
 Identities = 153/186 (82%), Positives = 174/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 1   VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 60

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           +DR+GVC GIFR DNVP+ DI KIVD+FPGQSIDFFGALRARVYDDEVRKWV++TGVE +
Sbjct: 61  DDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENI 120

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GK+LVNSREGPP F +P MT++KL+EYG+MLVKEQENVKRVQLAE+YL+EAALG+AN D+
Sbjct: 121 GKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDA 180

Query: 542 IKQGTF 559
           +K G+F
Sbjct: 181 MKTGSF 186


>tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37096 PE=4 SV=1
          Length = 466

 Score =  325 bits (834), Expect = 1e-87
 Identities = 153/186 (82%), Positives = 174/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 241 VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 300

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           +DR+GVC GIFR DNVP+ DI KIVD+FPGQSIDFFGALRARVYDDEVRKWV++TGVE +
Sbjct: 301 DDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENI 360

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GK+LVNSREGPP F +P MT++KL+EYG+MLVKEQENVKRVQLAE+YL+EAALG+AN D+
Sbjct: 361 GKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDA 420

Query: 542 IKQGTF 559
           +K G+F
Sbjct: 421 MKTGSF 426


>tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 433

 Score =  325 bits (834), Expect = 1e-87
 Identities = 153/186 (82%), Positives = 174/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 241 VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 300

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           +DR+GVC GIFR DNVP+ DI KIVD+FPGQSIDFFGALRARVYDDEVRKWV++TGVE +
Sbjct: 301 DDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENI 360

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GK+LVNSREGPP F +P MT++KL+EYG+MLVKEQENVKRVQLAE+YL+EAALG+AN D+
Sbjct: 361 GKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDA 420

Query: 542 IKQGTF 559
           +K G+F
Sbjct: 421 MKTGSF 426


>tr|A6N1P5|A6N1P5_ORYSI Ribulose bisphosphate carboxylase/oxygenase
           activase (Fragment) OS=Oryza sativa subsp. indica PE=2
           SV=1
          Length = 273

 Score =  325 bits (834), Expect = 1e-87
 Identities = 153/186 (82%), Positives = 174/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 81  VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 140

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           +DR+GVC GIFR DNVP+ DI KIVD+FPGQSIDFFGALRARVYDDEVRKWV++TGVE +
Sbjct: 141 DDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENI 200

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GK+LVNSREGPP F +P MT++KL+EYG+MLVKEQENVKRVQLAE+YL+EAALG+AN D+
Sbjct: 201 GKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDA 260

Query: 542 IKQGTF 559
           +K G+F
Sbjct: 261 MKTGSF 266


>tr|Q19RP2|Q19RP2_9MAGN Ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase (Fragment) OS=Pachysandra
           terminalis PE=2 SV=1
          Length = 314

 Score =  325 bits (833), Expect = 1e-87
 Identities = 155/186 (83%), Positives = 173/186 (93%)
 Frame = +2

Query: 2   VNATLMNIADNPTNVQLPGVYIKEEIPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 181
           VNATLMNIADNPTNVQLPG+Y KEE PRVP+IVTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 90  VNATLMNIADNPTNVQLPGMYNKEENPRVPVIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 149

Query: 182 EDRIGVCNGIFRADNVPESDITKIVDTFPGQSIDFFGALRARVYDDEVRKWVAETGVEQM 361
           +DRIGVC GIF+ADNVP  D+ KIVDTFPGQSIDFFGALRARVYDDEVRKW++  GV+++
Sbjct: 150 DDRIGVCTGIFKADNVPPEDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDKV 209

Query: 362 GKKLVNSREGPPTFTKPTMTVDKLLEYGFMLVKEQENVKRVQLAEKYLNEAALGEANEDS 541
           GKKLVNSREGPPTF +P MTV+KLLEYG MLV+EQENVKRVQLA+KYL+EAALG+AN+D+
Sbjct: 210 GKKLVNSREGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANKDA 269

Query: 542 IKQGTF 559
           I  GTF
Sbjct: 270 INSGTF 275