DK959310 |
Clone id |
TST39A01NGRL0004_F11 |
Library |
TST39 |
Length |
715 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_F11. 5' end sequence. |
Accession |
DK959310 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1135Contig1 |
Sequence |
CGCAGAGGGAGCGAGAGGCCCTTGAGCACAAGCTACAGATCCTCCGCACTAACATTGATG TTGTTGAGACATGGCTTGGCGCAAATAACTGCAAGTTGCATCATTGTGGAGAGATTGATG TAGATGATGTGTTTGTGCCATGTGATGCACTATCAAACCAGATGCTTAAGAACAAATCAG CAGATCTTGCGCTCGACGATGTGTTGTATTCATTGGATAAGGCAGTGCACCAAGGGGTCA TGCCGATGGATGCGTATCTTAGGCATGTGCGCACAATTGCTCGTGAACAATTCTTTTATA GAGCCACCTCTATGAAGATTGAAGCAATTCAGAGACAAGAACAAATTTCCAGCATAGCAG CAAGGTACACTGTTTGAGATCCGATGGCCAGCGACCGCATTGCTTGAAGTATGCTTTCTG CAAAACCATTCCTGCTTTTCTGCTTTTGCTTTTGTCTTCTTGCCAAGAAATGTGCTGTAC ATATAAACAAAAAAGGGGGGATTTTGGTGAGCTGTACATACAGACGGATACGATTACAAA AGTCTATGGGGGTCAATGTCCGCAGCTGCACTGGGGCAGCTCANAGTTCTTTCATTTTCT GTATGCATAGGCTTGTTAAAGTAGCCATGATGATCACATAGCACAAATTCCAAACCTAGT ATATCTTGCAGAAAAATAGAAGCATGATATACTTTGCCAATTAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54LJ3 |
Definition |
sp|Q54LJ3|TS101_DICDI ESCRT-I complex subunit tsg101 OS=Dictyostelium discoideum |
Align length |
119 |
Score (bit) |
82.0 |
E-value |
3.0e-15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P2J9 |
Definition |
tr|A9P2J9|A9P2J9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
121 |
Score (bit) |
140.0 |
E-value |
8.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959310|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_F11, 5' (702 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P2J9|A9P2J9_PICSI Putative uncharacterized protein OS=Picea... 140 8e-32 tr|A7QHJ8|A7QHJ8_VITVI Chromosome chr5 scaffold_98, whole genome... 129 1e-28 tr|A9S7R6|A9S7R6_PHYPA Predicted protein OS=Physcomitrella paten... 123 1e-26 tr|Q9LHG8|Q9LHG8_ARATH And human tumor susceptibility gene-like ... 117 9e-25 tr|A9PJF9|A9PJF9_POPJC Putative uncharacterized protein OS=Popul... 116 2e-24 tr|A9TJ74|A9TJ74_PHYPA Predicted protein OS=Physcomitrella paten... 115 4e-24 tr|Q9FFY6|Q9FFY6_ARATH Similarity to nascent polypeptide associa... 113 1e-23 tr|Q6ESB7|Q6ESB7_ORYSJ Os02g0833300 protein OS=Oryza sativa subs... 104 5e-21 tr|B8AFJ3|B8AFJ3_ORYSI Putative uncharacterized protein OS=Oryza... 104 5e-21 tr|A3AD24|A3AD24_ORYSJ Putative uncharacterized protein OS=Oryza... 104 5e-21 tr|A7PKJ3|A7PKJ3_VITVI Chromosome chr15 scaffold_19, whole genom... 100 7e-20 tr|A8IU80|A8IU80_CHLRE Subunit of the ESCRT-I complex OS=Chlamyd... 62 4e-08 tr|B7G481|B7G481_PHATR Predicted protein OS=Phaeodactylum tricor... 61 8e-08 tr|B7QIP7|B7QIP7_IXOSC Tumor susceptibility protein, putative (F... 61 8e-08 tr|A9V9P6|A9V9P6_MONBE Predicted protein OS=Monosiga brevicollis... 61 8e-08 tr|O76258|O76258_CAEEL Tumor susceptibility gene homolog protein... 58 5e-07 tr|B7GBA3|B7GBA3_PHATR Predicted protein OS=Phaeodactylum tricor... 57 1e-06 tr|B5DR62|B5DR62_DROPS GA28575 OS=Drosophila pseudoobscura pseud... 57 1e-06 tr|B4H4C4|B4H4C4_DROPE GL20850 OS=Drosophila persimilis GN=GL208... 57 1e-06 tr|Q6IQ70|Q6IQ70_DANRE Tumor susceptibility gene 101 OS=Danio re... 56 2e-06 tr|A4RTQ7|A4RTQ7_OSTLU Predicted protein (Fragment) OS=Ostreococ... 56 3e-06 tr|B4MMU9|B4MMU9_DROWI GK16611 OS=Drosophila willistoni GN=GK166... 56 3e-06 tr|B4J261|B4J261_DROGR GH16594 OS=Drosophila grimshawi GN=GH1659... 56 3e-06 tr|Q6P2Z8|Q6P2Z8_XENTR Tumor susceptibility gene 101 OS=Xenopus ... 55 3e-06 tr|Q6NUD5|Q6NUD5_XENLA MGC81040 protein OS=Xenopus laevis GN=MGC... 55 3e-06 tr|B5YNX5|B5YNX5_THAPS Predicted protein OS=Thalassiosira pseudo... 55 3e-06 tr|Q9I8G8|Q9I8G8_CHEMY Tumor susceptibility protein 101 OS=Chelo... 55 4e-06 tr|Q4SAD8|Q4SAD8_TETNG Chromosome 13 SCAF14688, whole genome sho... 55 4e-06 tr|Q3UK08|Q3UK08_MOUSE Putative uncharacterized protein OS=Mus m... 55 4e-06 tr|Q3UCW0|Q3UCW0_MOUSE Putative uncharacterized protein OS=Mus m... 55 4e-06
>tr|A9P2J9|A9P2J9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 161
Score = 140 bits (353), Expect = 8e-32 Identities = 67/121 (55%), Positives = 94/121 (77%) Frame = +3
Query: 3 QREREALEHKLQILRTNIDVVETWLGANNCKLHHCGEIDVDDVFVPCDALSNQMLKNKSA 182 Q E+E LE +LQ++ TN DV++TWL N K+ +D+DDVF PCDALS QML+ +A Sbjct: 37 QDEKEGLEQQLQLILTNTDVLDTWLRNNEDKIKT--NVDIDDVFEPCDALSRQMLECTAA 94
Query: 183 DLALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAA 362 DLA++D+LYSLDKA +G +P+DAYL++VR ++REQFF+RAT+ K+ A Q Q Q++S+AA Sbjct: 95 DLAIEDILYSLDKAAQEGSIPVDAYLKNVRALSREQFFHRATAAKVRAAQMQSQVASMAA 154
Query: 363 R 365 R Sbjct: 155 R 155
>tr|A7QHJ8|A7QHJ8_VITVI Chromosome chr5 scaffold_98, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038814001 PE=4 SV=1 Length = 425
Score = 129 bits (325), Expect = 1e-28 Identities = 62/121 (51%), Positives = 87/121 (71%) Frame = +3
Query: 3 QREREALEHKLQILRTNIDVVETWLGANNCKLHHCGEIDVDDVFVPCDALSNQMLKNKSA 182 Q E+E LE +LQ++ N DV+E WL N KL + G +DVD+ F PCDALS QML S+ Sbjct: 298 QDEKEGLEQQLQMVLMNADVLEAWLRENEVKLGNMGNLDVDNAFEPCDALSKQMLDCTSS 357
Query: 183 DLALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAA 362 DL+++D +Y+LDKAV +G + D YL++VR ++REQFF+RA K+ A Q Q Q++S+AA Sbjct: 358 DLSIEDTIYALDKAVQEGSISFDQYLKNVRLLSREQFFHRAMCAKLRAAQMQAQVASMAA 417
Query: 363 R 365 R Sbjct: 418 R 418
>tr|A9S7R6|A9S7R6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_182103 PE=4 SV=1 Length = 369
Score = 123 bits (308), Expect = 1e-26 Identities = 58/119 (48%), Positives = 88/119 (73%) Frame = +3
Query: 9 EREALEHKLQILRTNIDVVETWLGANNCKLHHCGEIDVDDVFVPCDALSNQMLKNKSADL 188 E+ ALE++LQ TN ++E WL AN+ + H +D+DDVF P D LS Q+L+++S+DL Sbjct: 249 EKAALENQLQATLTNTSILENWLKANDKGIAH---VDIDDVFEPADTLSKQLLESQSSDL 305
Query: 189 ALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAAR 365 A++DVLY++DK V+P++AYL+HVR +AREQFF+RAT+ KI +Q Q+ ++A+R Sbjct: 306 AIEDVLYAIDKGAQDLVVPVEAYLKHVRVLAREQFFHRATAQKIRQMQVSAQVDNMASR 364
>tr|Q9LHG8|Q9LHG8_ARATH And human tumor susceptibility gene-like protein (Putative uncharacterized protein At3g12400) (Putative uncharacterized protein) (Putative uncharacterized protein T2E22.28) OS=Arabidopsis thaliana GN=T2E22.28 PE=2 SV=1 Length = 398
Score = 117 bits (292), Expect = 9e-25 Identities = 55/119 (46%), Positives = 83/119 (69%) Frame = +3
Query: 9 EREALEHKLQILRTNIDVVETWLGANNCKLHHCGEIDVDDVFVPCDALSNQMLKNKSADL 188 E+E LE +LQI+ N D++++W+ N K + ++DVD+ F D LS QML+ + DL Sbjct: 277 EKETLEQQLQIISMNTDILDSWVRENQGKTKNLVDLDVDNAFECGDTLSKQMLECTALDL 336
Query: 189 ALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAAR 365 A++D +YSLDK+ GV+P D YLR+VR ++REQFF+RAT K+ A Q + Q+++IA R Sbjct: 337 AIEDAIYSLDKSFQDGVVPFDQYLRNVRLLSREQFFHRATGSKVRAAQMEVQVAAIAGR 395
>tr|A9PJF9|A9PJF9_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 403
Score = 116 bits (290), Expect = 2e-24 Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%) Frame = +3
Query: 9 EREALEHKLQILRTNIDVVETWLGANNCKLHHCGE-IDVDDVFVPCDALSNQMLKNKSAD 185 E E LE +LQ++ N DV+E W+ N K+ E IDVD F D LS QML+ +AD Sbjct: 278 EMEGLESQLQVVLMNTDVLEAWVRQNEGKVKGGMEDIDVDKAFECVDVLSKQMLECTAAD 337
Query: 186 LALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAAR 365 +A++DV+YSLDKAV +G MP YLR+VR ++REQFF RAT+ K+ A Q Q Q++S+AAR Sbjct: 338 MAIEDVVYSLDKAVQEGAMPFVQYLRNVRLLSREQFFNRATAAKVRAAQMQAQVASMAAR 397
>tr|A9TJ74|A9TJ74_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170379 PE=4 SV=1 Length = 409
Score = 115 bits (287), Expect = 4e-24 Identities = 55/119 (46%), Positives = 84/119 (70%) Frame = +3
Query: 9 EREALEHKLQILRTNIDVVETWLGANNCKLHHCGEIDVDDVFVPCDALSNQMLKNKSADL 188 E+ ALE +LQ TN D++E WL AN+ + ++DDVF P D LS Q+L+ +S+DL Sbjct: 289 EKAALESQLQATLTNTDILENWLRANDRGITRA---NIDDVFEPVDTLSKQLLECQSSDL 345
Query: 189 ALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAAR 365 A++D+LY++DK V+P++AYL+HVR +AREQFF+RAT+ K+ +Q Q+ ++A R Sbjct: 346 AIEDILYAIDKGAQDLVIPVEAYLKHVRVLAREQFFHRATAQKLRQMQVSTQVENMAVR 404
>tr|Q9FFY6|Q9FFY6_ARATH Similarity to nascent polypeptide associated complex alpha chain OS=Arabidopsis thaliana GN=At5g13860 PE=4 SV=1 Length = 368
Score = 113 bits (283), Expect = 1e-23 Identities = 57/120 (47%), Positives = 83/120 (69%), Gaps = 1/120 (0%) Frame = +3
Query: 9 EREALEHKLQILRTNIDVVETWLGANNCKLHHC-GEIDVDDVFVPCDALSNQMLKNKSAD 185 E+E LE +LQ++ N DV+ +W+ N K ++DVDD F D+LS QML+ + D Sbjct: 246 EKETLEQQLQVIAMNTDVLGSWIRENQGKAKDLLVDLDVDDSFECIDSLSKQMLECTALD 305
Query: 186 LALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAAR 365 LA++DV+YS+DK+ G +P D YLR+VR ++REQFF+RAT+ K+ IQ Q++SIAAR Sbjct: 306 LAIEDVVYSMDKSFRDGSLPFDQYLRNVRLLSREQFFHRATAEKVREIQMDAQVASIAAR 365
>tr|Q6ESB7|Q6ESB7_ORYSJ Os02g0833300 protein OS=Oryza sativa subsp. japonica GN=OJ1282_E10.10 PE=2 SV=1 Length = 402
Score = 104 bits (260), Expect = 5e-21 Identities = 53/119 (44%), Positives = 76/119 (63%) Frame = +3
Query: 9 EREALEHKLQILRTNIDVVETWLGANNCKLHHCGEIDVDDVFVPCDALSNQMLKNKSADL 188 E+EALE +LQ + D++E W+ N G+ + D+ D LS QML+ +ADL Sbjct: 280 EKEALERRLQDVMMATDLMEAWVMENTKGA--AGDTEADEAIETADVLSKQMLECTAADL 337
Query: 189 ALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAAR 365 AL+D +Y+LDKA+ +G +P D YLR VR +AREQFF R S K+ Q+Q Q++ +AAR Sbjct: 338 ALEDTIYALDKAIQEGSVPFDGYLRSVRALAREQFFQRVLSTKVNKAQQQAQVARMAAR 396
>tr|B8AFJ3|B8AFJ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09582 PE=4 SV=1 Length = 487
Score = 104 bits (260), Expect = 5e-21 Identities = 53/119 (44%), Positives = 76/119 (63%) Frame = +3
Query: 9 EREALEHKLQILRTNIDVVETWLGANNCKLHHCGEIDVDDVFVPCDALSNQMLKNKSADL 188 E+EALE +LQ + D++E W+ N G+ + D+ D LS QML+ +ADL Sbjct: 280 EKEALERRLQDVMMATDLMEAWVMENTKGA--AGDTEADEAIETADVLSKQMLECTAADL 337
Query: 189 ALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAAR 365 AL+D +Y+LDKA+ +G +P D YLR VR +AREQFF R S K+ Q+Q Q++ +AAR Sbjct: 338 ALEDTIYALDKAIQEGSVPFDGYLRSVRALAREQFFQRVLSTKVNKAQQQAQVARMAAR 396
>tr|A3AD24|A3AD24_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008696 PE=4 SV=1 Length = 261
Score = 104 bits (260), Expect = 5e-21 Identities = 53/119 (44%), Positives = 76/119 (63%) Frame = +3
Query: 9 EREALEHKLQILRTNIDVVETWLGANNCKLHHCGEIDVDDVFVPCDALSNQMLKNKSADL 188 E+EALE +LQ + D++E W+ N G+ + D+ D LS QML+ +ADL Sbjct: 139 EKEALERRLQDVMMATDLMEAWVMENTKGA--AGDTEADEAIETADVLSKQMLECTAADL 196
Query: 189 ALDDVLYSLDKAVHQGVMPMDAYLRHVRTIAREQFFYRATSMKIEAIQRQEQISSIAAR 365 AL+D +Y+LDKA+ +G +P D YLR VR +AREQFF R S K+ Q+Q Q++ +AAR Sbjct: 197 ALEDTIYALDKAIQEGSVPFDGYLRSVRALAREQFFQRVLSTKVNKAQQQAQVARMAAR 255
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